RNA–Protein interactions for RNA: ENST00000425630.1

LINC00200-201, long intergenic non-protein coding RNA 200, humanhuman

TSL 1 (best) BASIC

Gene LINC00200, Length 2,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00200-201ENST00000425630 CALR3Q96L12 384 aaKnown RBP18.5■□□□□ 0.55
LINC00200-201ENST00000425630 TRIM31Q9BZY9 425 aa18.5■□□□□ 0.55
LINC00200-201ENST00000425630 POTEFA5A3E0 1075 aa18.5■□□□□ 0.55
LINC00200-201ENST00000425630 POTEIP0CG38 1075 aa18.5■□□□□ 0.55
LINC00200-201ENST00000425630 AKR1B1P15121 316 aa18.5■□□□□ 0.55
LINC00200-201ENST00000425630 HOXD13P35453 343 aa18.5■□□□□ 0.55
LINC00200-201ENST00000425630 EXOC3L4Q17RC7 722 aa18.5■□□□□ 0.55
LINC00200-201ENST00000425630 DCAF17Q5H9S7 520 aaPredicted RBP18.5■□□□□ 0.55
LINC00200-201ENST00000425630 POTEGQ6S5H5 508 aa18.5■□□□□ 0.55
LINC00200-201ENST00000425630 POTEEQ6S8J3 1075 aa18.5■□□□□ 0.55
LINC00200-201ENST00000425630 CCDC121Q6ZUS5 278 aa18.5■□□□□ 0.55
LINC00200-201ENST00000425630 PTF1AQ7RTS3 328 aa18.5■□□□□ 0.55
LINC00200-201ENST00000425630 TMC3Q7Z5M5 1100 aa18.5■□□□□ 0.55
LINC00200-201ENST00000425630 AMIGO3Q86WK7 504 aa18.5■□□□□ 0.55
LINC00200-201ENST00000425630 STXBP5LQ9Y2K9 1186 aa18.5■□□□□ 0.55
LINC00200-201ENST00000425630 PHF20L1A8MW92 1017 aa18.49■□□□□ 0.55
LINC00200-201ENST00000425630 KRT18P05783 430 aaKnown RBP18.49■□□□□ 0.55
LINC00200-201ENST00000425630 SETQ01105 290 aaPredicted RBP18.49■□□□□ 0.55
LINC00200-201ENST00000425630 BIRC3Q13489 604 aa18.49■□□□□ 0.55
LINC00200-201ENST00000425630 C10orf76Q5T2E6 689 aa18.49■□□□□ 0.55
LINC00200-201ENST00000425630 RUFY4Q6ZNE9 571 aa18.49■□□□□ 0.55
LINC00200-201ENST00000425630 MDM1Q8TC05 714 aa18.49■□□□□ 0.55
LINC00200-201ENST00000425630 SEC16BQ96JE7 1060 aa18.49■□□□□ 0.55
LINC00200-201ENST00000425630 TRIM51Q9BSJ1 452 aa18.49■□□□□ 0.55
LINC00200-201ENST00000425630 NT5C3AQ9H0P0 336 aa18.49■□□□□ 0.55
LINC00200-201ENST00000425630 PNMA6FA0A0J9YX94 578 aa18.49■□□□□ 0.55
LINC00200-201ENST00000425630 DDX3XO00571 662 aaKnown RBP eCLIP18.49■□□□□ 0.554e-9■■■□□ 15.4
LINC00200-201ENST00000425630 RFC4P35249 363 aa18.49■□□□□ 0.55
LINC00200-201ENST00000425630 SLC12A3P55017 1021 aa18.49■□□□□ 0.55
LINC00200-201ENST00000425630 PSMC6P62333 389 aa18.49■□□□□ 0.55
LINC00200-201ENST00000425630 DHX9Q08211 1270 aaKnown RBP18.49■□□□□ 0.55
LINC00200-201ENST00000425630 EDRF1Q3B7T1 1238 aa18.49■□□□□ 0.55
LINC00200-201ENST00000425630 ASPRV1Q53RT3 343 aa18.49■□□□□ 0.55
LINC00200-201ENST00000425630 DAAM2Q86T65 1068 aa18.49■□□□□ 0.55
LINC00200-201ENST00000425630 CCDC114Q96M63 670 aa18.49■□□□□ 0.55
LINC00200-201ENST00000425630 ARMCX3Q9UH62 379 aaPredicted RBP18.49■□□□□ 0.55
LINC00200-201ENST00000425630 NARFQ9UHQ1 456 aa18.49■□□□□ 0.55
LINC00200-201ENST00000425630 NENFQ9UMX5 172 aa18.49■□□□□ 0.55
LINC00200-201ENST00000425630 MYH4Q9Y623 1939 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 USP17L15C9J2P7 530 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 USP17L13C9JLJ4 530 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 USP17L11C9JVI0 530 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 USP17L18D6R9N7 530 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 USP17L22D6RA61 530 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 USP17L17D6RBQ6 530 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 USP17L19D6RCP7 530 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 USP17L20D6RJB6 530 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 MEIS1O00470 390 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 ATP2C2O75185 946 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 AKAP3O75969 853 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 AFPP02771 609 aaKnown RBP18.48■□□□□ 0.55
LINC00200-201ENST00000425630 SNHG28P0DPA3 235 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 USP17L24Q0WX57 530 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 USP17L6PQ6QN14 398 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 DPP8Q6V1X1 898 aaPredicted RBP18.48■□□□□ 0.55
LINC00200-201ENST00000425630 SLFN11Q7Z7L1 901 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 NT5DC3Q86UY8 548 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 CDCA7Q9BWT1 371 aaPredicted RBP18.48■□□□□ 0.55
LINC00200-201ENST00000425630 CXorf56Q9H5V9 222 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 SIX2Q9NPC8 291 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 KDM3AQ9Y4C1 1321 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 FRMD3A2A2Y4 597 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 USP17L10C9JJH3 530 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 F8VZ95 297 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 COPB2P35606 906 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 CASP4P49662 377 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 IFI16Q16666 785 aaKnown RBP18.48■□□□□ 0.55
LINC00200-201ENST00000425630 KRT71Q3SY84 523 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 ZNF804AQ7Z570 1209 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 RASGEF1CQ8N431 466 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 CUL5Q93034 780 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 OSGEPQ9NPF4 335 aa18.48■□□□□ 0.55
LINC00200-201ENST00000425630 GOLGA6L7A0A1B0GV03 622 aa18.47■□□□□ 0.55
LINC00200-201ENST00000425630 IBSPP21815 317 aaPredicted RBP18.47■□□□□ 0.55
LINC00200-201ENST00000425630 ZNF543Q08ER8 600 aa18.47■□□□□ 0.55
LINC00200-201ENST00000425630 PICALMQ13492 652 aa18.47■□□□□ 0.55
LINC00200-201ENST00000425630 PLCB4Q15147 1175 aa18.47■□□□□ 0.55
LINC00200-201ENST00000425630 EPHA7Q15375 998 aa18.47■□□□□ 0.55
LINC00200-201ENST00000425630 ANKRD20A8PQ5CZ79 823 aa18.47■□□□□ 0.55
LINC00200-201ENST00000425630 AGBL2Q5U5Z8 902 aa18.47■□□□□ 0.55
LINC00200-201ENST00000425630 TCERG1LQ5VWI1 586 aa18.47■□□□□ 0.55
LINC00200-201ENST00000425630 U2AF1L4Q8WU68 220 aaKnown RBP18.47■□□□□ 0.55
LINC00200-201ENST00000425630 DHX36Q9H2U1 1008 aaKnown RBP18.47■□□□□ 0.55
LINC00200-201ENST00000425630 PSTPIP2Q9H939 334 aa18.47■□□□□ 0.55
LINC00200-201ENST00000425630 CD209Q9NNX6 404 aa18.47■□□□□ 0.55
LINC00200-201ENST00000425630 HAUS2Q9NVX0 235 aa18.47■□□□□ 0.55
LINC00200-201ENST00000425630 BZW2Q9Y6E2 419 aaKnown RBP18.47■□□□□ 0.55
LINC00200-201ENST00000425630 CCDC188H7C350 402 aa18.47■□□□□ 0.55
LINC00200-201ENST00000425630 CHUKO15111 745 aa18.47■□□□□ 0.55
LINC00200-201ENST00000425630 FLOT1O75955 427 aa18.47■□□□□ 0.55
LINC00200-201ENST00000425630 H2AFZP0C0S5 128 aa18.47■□□□□ 0.55
LINC00200-201ENST00000425630 PRKCIP41743 596 aa18.47■□□□□ 0.55
LINC00200-201ENST00000425630 POU5F1Q01860 360 aaKnown RBP18.47■□□□□ 0.55
LINC00200-201ENST00000425630 SF3A3Q12874 501 aaKnown RBP eCLIP18.47■□□□□ 0.55
LINC00200-201ENST00000425630 KCTD1Q719H9 257 aa18.47■□□□□ 0.55
LINC00200-201ENST00000425630 H2AFVQ71UI9 128 aa18.47■□□□□ 0.55
LINC00200-201ENST00000425630 FRMD5Q7Z6J6 570 aa18.47■□□□□ 0.55
LINC00200-201ENST00000425630 ADAT2Q7Z6V5 191 aaKnown RBP18.47■□□□□ 0.55
LINC00200-201ENST00000425630 SFR1Q86XK3 245 aa18.47■□□□□ 0.55
LINC00200-201ENST00000425630 IKZF4Q9H2S9 585 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms