RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 GIPC1O14908 333 aa18.2■□□□□ 0.5
PCDHA13-202ENST00000409494 MYL3P08590 195 aa18.2■□□□□ 0.5
PCDHA13-202ENST00000409494 PHBP35232 272 aa18.2■□□□□ 0.5
PCDHA13-202ENST00000409494 RNASE9P60153 205 aaKnown RBP18.2■□□□□ 0.5
PCDHA13-202ENST00000409494 LRRC41Q15345 812 aa18.2■□□□□ 0.5
PCDHA13-202ENST00000409494 GUF1Q8N442 669 aaKnown RBP18.2■□□□□ 0.5
PCDHA13-202ENST00000409494 PSMD1Q99460 953 aa18.2■□□□□ 0.5
PCDHA13-202ENST00000409494 ZFYVE28Q9HCC9 887 aa18.2■□□□□ 0.5
PCDHA13-202ENST00000409494 GGA3Q9NZ52 723 aa18.2■□□□□ 0.5
PCDHA13-202ENST00000409494 MKRN1Q9UHC7 482 aaKnown RBP18.2■□□□□ 0.5
PCDHA13-202ENST00000409494 SERPING1P05155 500 aa18.19■□□□□ 0.5
PCDHA13-202ENST00000409494 ZSCAN26Q16670 478 aa18.19■□□□□ 0.5
PCDHA13-202ENST00000409494 ATP2A3Q93084 1043 aa18.19■□□□□ 0.5
PCDHA13-202ENST00000409494 OATP04181 439 aa18.19■□□□□ 0.5
PCDHA13-202ENST00000409494 FKBP1AP62942 108 aaKnown RBP18.19■□□□□ 0.5
PCDHA13-202ENST00000409494 NAALADL2Q58DX5 795 aa18.19■□□□□ 0.5
PCDHA13-202ENST00000409494 CFAP157Q5JU67 520 aa18.19■□□□□ 0.5
PCDHA13-202ENST00000409494 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.19■□□□□ 0.5
PCDHA13-202ENST00000409494 GCNT4Q9P109 453 aa18.19■□□□□ 0.5
PCDHA13-202ENST00000409494 CDC23Q9UJX2 597 aa18.19■□□□□ 0.5
PCDHA13-202ENST00000409494 TNPO2O14787 897 aaKnown RBP18.19■□□□□ 0.5
PCDHA13-202ENST00000409494 ATP8B1O43520 1251 aa18.19■□□□□ 0.5
PCDHA13-202ENST00000409494 MKRN3Q13064 507 aaKnown RBP18.19■□□□□ 0.5
PCDHA13-202ENST00000409494 SETDB1Q15047 1291 aa18.19■□□□□ 0.5
PCDHA13-202ENST00000409494 SLFNL1Q499Z3 407 aa18.19■□□□□ 0.5
PCDHA13-202ENST00000409494 SCYL2Q6P3W7 929 aa18.19■□□□□ 0.5
PCDHA13-202ENST00000409494 FBF1Q8TES7 1133 aa18.19■□□□□ 0.5
PCDHA13-202ENST00000409494 DEFB129Q9H1M3 183 aa18.19■□□□□ 0.5
PCDHA13-202ENST00000409494 CASP14P31944 242 aa18.18■□□□□ 0.5
PCDHA13-202ENST00000409494 DMTNQ08495 405 aa18.18■□□□□ 0.5
PCDHA13-202ENST00000409494 ZNF667Q5HYK9 610 aa18.18■□□□□ 0.5
PCDHA13-202ENST00000409494 PPP1R21Q6ZMI0 780 aa18.18■□□□□ 0.5
PCDHA13-202ENST00000409494 NLRP4Q96MN2 994 aa18.18■□□□□ 0.5
PCDHA13-202ENST00000409494 KATNAL1Q9BW62 490 aa18.18■□□□□ 0.5
PCDHA13-202ENST00000409494 GCOM2Q9BZD3 368 aaPredicted RBP18.18■□□□□ 0.5
PCDHA13-202ENST00000409494 LRRC4Q9HBW1 653 aa18.18■□□□□ 0.5
PCDHA13-202ENST00000409494 SLC9A2Q9UBY0 812 aa18.18■□□□□ 0.5
PCDHA13-202ENST00000409494 EYA4O95677 639 aa18.18■□□□□ 0.5
PCDHA13-202ENST00000409494 SRGAP2CP0DJJ0 459 aa18.18■□□□□ 0.5
PCDHA13-202ENST00000409494 FGFR2P21802 821 aa18.18■□□□□ 0.5
PCDHA13-202ENST00000409494 TAF1CQ15572 869 aaPredicted RBP18.18■□□□□ 0.5
PCDHA13-202ENST00000409494 PROCA1Q8NCQ7 364 aaPredicted RBP18.18■□□□□ 0.5
PCDHA13-202ENST00000409494 RDM1Q8NG50 284 aa18.18■□□□□ 0.5
PCDHA13-202ENST00000409494 PANX2Q96RD6 677 aa18.18■□□□□ 0.5
PCDHA13-202ENST00000409494 KCNK3O14649 394 aa18.18■□□□□ 0.5
PCDHA13-202ENST00000409494 CLIC2O15247 247 aa18.18■□□□□ 0.5
PCDHA13-202ENST00000409494 SREBF2Q12772 1141 aa18.18■□□□□ 0.5
PCDHA13-202ENST00000409494 MTMR2Q13614 643 aa18.18■□□□□ 0.5
PCDHA13-202ENST00000409494 RSRC2Q7L4I2 434 aaKnown RBP18.18■□□□□ 0.5
PCDHA13-202ENST00000409494 SMIM23A6NLE4 172 aa18.18■□□□□ 0.5
PCDHA13-202ENST00000409494 HPDP32754 393 aaPredicted RBP18.18■□□□□ 0.5
PCDHA13-202ENST00000409494 KCNB1Q14721 858 aa18.18■□□□□ 0.5
PCDHA13-202ENST00000409494 SRBD1Q8N5C6 995 aaKnown RBP18.18■□□□□ 0.5
PCDHA13-202ENST00000409494 CCT6BQ92526 530 aa18.18■□□□□ 0.5
PCDHA13-202ENST00000409494 ADARB2Q9NS39 739 aaKnown RBP18.18■□□□□ 0.5
PCDHA13-202ENST00000409494 GOLGA8CPA6NN73 597 aa18.17■□□□□ 0.5
PCDHA13-202ENST00000409494 KRIT1O00522 736 aa18.17■□□□□ 0.5
PCDHA13-202ENST00000409494 ENOSF1Q7L5Y1 443 aa18.17■□□□□ 0.5
PCDHA13-202ENST00000409494 VSTM4Q8IW00 320 aa18.17■□□□□ 0.5
PCDHA13-202ENST00000409494 KLHL7Q8IXQ5 586 aa18.17■□□□□ 0.5
PCDHA13-202ENST00000409494 CDC25AP30304 524 aa18.17■□□□□ 0.5
PCDHA13-202ENST00000409494 XKR3Q5GH77 459 aa18.17■□□□□ 0.5
PCDHA13-202ENST00000409494 C7orf31Q8N865 590 aa18.17■□□□□ 0.5
PCDHA13-202ENST00000409494 GSDMBQ8TAX9 411 aa18.17■□□□□ 0.5
PCDHA13-202ENST00000409494 SCYL3Q8IZE3 742 aa18.17■□□□□ 0.5
PCDHA13-202ENST00000409494 ELP3Q9H9T3 547 aa18.17■□□□□ 0.5
PCDHA13-202ENST00000409494 SCINQ9Y6U3 715 aa18.17■□□□□ 0.5
PCDHA13-202ENST00000409494 FAM205AQ6ZU69 1335 aa18.17■□□□□ 0.5
PCDHA13-202ENST00000409494 IL1R1P14778 569 aa18.17■□□□□ 0.5
PCDHA13-202ENST00000409494 SNAP25P60880 206 aa18.17■□□□□ 0.5
PCDHA13-202ENST00000409494 DYDC2Q96IM9 177 aa18.17■□□□□ 0.5
PCDHA13-202ENST00000409494 MRPL4Q9BYD3 311 aaKnown RBP18.17■□□□□ 0.5
PCDHA13-202ENST00000409494 EDEM3Q9BZQ6 932 aa18.17■□□□□ 0.5
PCDHA13-202ENST00000409494 MAGEB2O15479 319 aa18.16■□□□□ 0.5
PCDHA13-202ENST00000409494 HOXA10P31260 410 aaPredicted RBP18.16■□□□□ 0.5
PCDHA13-202ENST00000409494 GOLGA8FQ08AF8 430 aa18.16■□□□□ 0.5
PCDHA13-202ENST00000409494 GOLGA8DPQ0D2H9 430 aa18.16■□□□□ 0.5
PCDHA13-202ENST00000409494 TCP11X2Q5H9J9 407 aa18.16■□□□□ 0.5
PCDHA13-202ENST00000409494 STOX1Q6ZVD7 989 aa18.16■□□□□ 0.5
PCDHA13-202ENST00000409494 FAM83AQ86UY5 434 aa18.16■□□□□ 0.5
PCDHA13-202ENST00000409494 RIT2Q99578 217 aa18.16■□□□□ 0.5
PCDHA13-202ENST00000409494 PHF20Q9BVI0 1012 aa18.16■□□□□ 0.5
PCDHA13-202ENST00000409494 GABBR1Q9UBS5 961 aa18.16■□□□□ 0.5
PCDHA13-202ENST00000409494 TBXAS1P24557 533 aaPredicted RBP18.16■□□□□ 0.5
PCDHA13-202ENST00000409494 SLC12A2P55011 1212 aa18.16■□□□□ 0.5
PCDHA13-202ENST00000409494 BFSP1Q12934 665 aa18.16■□□□□ 0.5
PCDHA13-202ENST00000409494 THEM5Q8N1Q8 247 aa18.16■□□□□ 0.5
PCDHA13-202ENST00000409494 BEST2Q8NFU1 509 aa18.16■□□□□ 0.5
PCDHA13-202ENST00000409494 CCHCR1Q8TD31 782 aa18.16■□□□□ 0.5
PCDHA13-202ENST00000409494 PCIF1Q9H4Z3 704 aa18.16■□□□□ 0.5
PCDHA13-202ENST00000409494 PRR12Q9ULL5 1215 aa18.16■□□□□ 0.5
PCDHA13-202ENST00000409494 ANXA13P27216 316 aa18.16■□□□□ 0.5
PCDHA13-202ENST00000409494 KNOP1Q1ED39 458 aaKnown RBP18.16■□□□□ 0.5
PCDHA13-202ENST00000409494 GPIHBP1Q8IV16 184 aa18.16■□□□□ 0.5
PCDHA13-202ENST00000409494 RHOT2Q8IXI1 618 aa18.16■□□□□ 0.5
PCDHA13-202ENST00000409494 ZNF653Q96CK0 615 aa18.16■□□□□ 0.5
PCDHA13-202ENST00000409494 GDAP1L1Q96MZ0 367 aa18.16■□□□□ 0.5
PCDHA13-202ENST00000409494 SPATA33Q96N06 139 aa18.16■□□□□ 0.5
PCDHA13-202ENST00000409494 JPH1Q9HDC5 661 aaPredicted RBP18.16■□□□□ 0.5
PCDHA13-202ENST00000409494 DGAT1O75907 488 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms