RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 NACAP1Q9BZK3 213 aa6.34□□□□□ -1.39
R3HDM1-202ENST00000409478 LRMDAQ9H2I8 198 aa6.34□□□□□ -1.39
R3HDM1-202ENST00000409478 ETNK1Q9HBU6 452 aa6.34□□□□□ -1.39
R3HDM1-202ENST00000409478 AIPL1Q9NZN9 384 aa6.34□□□□□ -1.39
R3HDM1-202ENST00000409478 PDP2Q9P2J9 529 aa6.34□□□□□ -1.39
R3HDM1-202ENST00000409478 AMACRQ9UHK6 382 aa6.34□□□□□ -1.39
R3HDM1-202ENST00000409478 TMCO1Q9UM00 188 aa6.34□□□□□ -1.39
R3HDM1-202ENST00000409478 TBX22Q9Y458 520 aa6.34□□□□□ -1.39
R3HDM1-202ENST00000409478 MYH7BA7E2Y1 1941 aa6.34□□□□□ -1.39
R3HDM1-202ENST00000409478 MROH7Q68CQ1 1323 aa6.34□□□□□ -1.4
R3HDM1-202ENST00000409478 PKD1L3Q7Z443 1732 aa6.34□□□□□ -1.4
R3HDM1-202ENST00000409478 CALM1P0DP23 149 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 CALM2P0DP24 149 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 CALM3P0DP25 149 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 ATF3P18847 181 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 ITGA6P23229 1130 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 RFC5P40937 340 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 ZC3H6P61129 1189 aaKnown RBP6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 AMPD3Q01432 767 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 CLUL1Q15846 466 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 ACBD5Q5T8D3 534 aaPredicted RBP6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 DPY19L2Q6NUT2 758 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 DTHD1Q6ZMT9 781 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 INPP5DQ92835 1189 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 SHISA4Q96DD7 197 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 CCSER1Q9C0I3 900 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 EIF4E1BA6NMX2 242 aaKnown RBP6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 TTI1O43156 1089 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 PEX11AO75192 247 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 SHBGP04278 402 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 GNAT2P19087 354 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 ATP5DP30049 168 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 UBA7P41226 1012 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 IFNAR2P48551 515 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 RASSF2P50749 326 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 DBN1Q16643 649 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 RNF220Q5VTB9 566 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 PIK3AP1Q6ZUJ8 805 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 SYCE1Q8N0S2 351 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 FITM2Q8N6M3 262 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 KCNH5Q8NCM2 988 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 FAM136AQ96C01 138 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 NUDCD1Q96RS6 583 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 CCDC28BQ9BUN5 200 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 TIPINQ9BVW5 301 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 PUS3Q9BZE2 481 aaKnown RBP6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 GOPCQ9HD26 462 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 STOML1Q9UBI4 398 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 NKX1-2Q9UD57 310 aaPredicted RBP6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 PRKAG3Q9UGI9 489 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 PCDHGA4Q9Y5G9 962 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 GMEB1Q9Y692 573 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 SLC4A4Q9Y6R1 1079 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 ATP8B3O60423 1300 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 TLDC2A0PJX2 215 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 IDH1O75874 414 aaKnown RBP6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 PDE6AP16499 860 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 LTKP29376 864 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 MCAMP43121 646 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 PTDSS1P48651 473 aaKnown RBP6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 SETDB1Q15047 1291 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 CENPPQ6IPU0 288 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 C7orf25Q9BPX7 421 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 ZKSCAN3Q9BRR0 538 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 SLC52A2Q9HAB3 445 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 FGFR1OP2Q9NVK5 253 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 GGT7Q9UJ14 662 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 DIS3Q9Y2L1 958 aaKnown RBP6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 MYH10P35580 1976 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 PHRF1Q9P1Y6 1649 aaKnown RBP6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 KIF1AQ12756 1690 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 MAGEA13PA6NCF6 341 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 FAM187AA6NFU0 413 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 TCP11X1B4DZS4 312 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 LAD1O00515 517 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 NVLO15381 856 aaKnown RBP6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 PRDM1O75626 825 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 UPP2O95045 317 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 TPP2P29144 1249 aaPredicted RBP6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 LRRC63Q05C16 580 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 SF3A3Q12874 501 aaKnown RBP eCLIP6.33□□□□□ -1.49e-7■□□□□ 11
R3HDM1-202ENST00000409478 TNFAIP8L3Q5GJ75 292 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 C1QTNF12Q5T7M4 302 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 MAEAQ7L5Y9 396 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 PTPRN2Q92932 1015 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 GBP5Q96PP8 586 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 DPH5Q9H2P9 285 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 DCLRE1BQ9H816 532 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 LARSQ9P2J5 1176 aaKnown RBP6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 PARP2Q9UGN5 583 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 RASAL2Q9UJF2 1139 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 PNMA3Q9UL41 463 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 BLOC1S6Q9UL45 172 aa6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 TTC7AQ9ULT0 858 aaPredicted RBP6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 G3BP2Q9UN86 482 aaKnown RBP6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 V9GY48 417 aaPredicted RBP6.33□□□□□ -1.4
R3HDM1-202ENST00000409478 FER1L4A9Z1Z3 1794 aa6.32□□□□□ -1.4
R3HDM1-202ENST00000409478 A0A1B0GVG6 124 aa6.32□□□□□ -1.4
R3HDM1-202ENST00000409478 TULP1O00294 542 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 200.5 ms