RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 BANK1Q8NDB2 785 aa16.72■□□□□ 0.27
SCAMP4-202ENST00000409472 CLEC4DQ8WXI8 215 aa16.72■□□□□ 0.27
SCAMP4-202ENST00000409472 ZBTB9Q96C00 473 aa16.72■□□□□ 0.27
SCAMP4-202ENST00000409472 IFIH1Q9BYX4 1025 aaKnown RBP16.72■□□□□ 0.27
SCAMP4-202ENST00000409472 RNF216Q9NWF9 866 aaPredicted RBP16.72■□□□□ 0.27
SCAMP4-202ENST00000409472 MYH10P35580 1976 aa16.72■□□□□ 0.27
SCAMP4-202ENST00000409472 TBCAO75347 108 aaKnown RBP16.71■□□□□ 0.27
SCAMP4-202ENST00000409472 COG2Q14746 738 aa16.71■□□□□ 0.27
SCAMP4-202ENST00000409472 EDRF1Q3B7T1 1238 aa16.71■□□□□ 0.27
SCAMP4-202ENST00000409472 TBC1D10BQ4KMP7 808 aaPredicted RBP16.71■□□□□ 0.27
SCAMP4-202ENST00000409472 CC2D1AQ6P1N0 951 aaPredicted RBP16.71■□□□□ 0.27
SCAMP4-202ENST00000409472 ANKRD13CQ8N6S4 541 aa16.71■□□□□ 0.27
SCAMP4-202ENST00000409472 WNK4Q96J92 1243 aa16.71■□□□□ 0.27
SCAMP4-202ENST00000409472 CAPZA3Q96KX2 299 aa16.71■□□□□ 0.27
SCAMP4-202ENST00000409472 SH2D4AQ9H788 454 aa16.71■□□□□ 0.27
SCAMP4-202ENST00000409472 RAVER2Q9HCJ3 691 aaKnown RBP16.71■□□□□ 0.27
SCAMP4-202ENST00000409472 TRAF3IP3Q9Y228 551 aa16.71■□□□□ 0.27
SCAMP4-202ENST00000409472 PCDHA13Q9Y5I0 950 aa16.71■□□□□ 0.27
SCAMP4-202ENST00000409472 ZNF185O15231 689 aa16.71■□□□□ 0.26
SCAMP4-202ENST00000409472 KRT86O43790 486 aa16.71■□□□□ 0.26
SCAMP4-202ENST00000409472 PLA2G6O60733 806 aa16.71■□□□□ 0.26
SCAMP4-202ENST00000409472 ICAM1P05362 532 aa16.71■□□□□ 0.26
SCAMP4-202ENST00000409472 RHOXF2BP0C7M4 288 aa16.71■□□□□ 0.26
SCAMP4-202ENST00000409472 KCNH2Q12809 1159 aa16.71■□□□□ 0.26
SCAMP4-202ENST00000409472 ENOX2Q16206 610 aaKnown RBP16.71■□□□□ 0.26
SCAMP4-202ENST00000409472 ASTE1Q2TB18 679 aaPredicted RBP16.71■□□□□ 0.26
SCAMP4-202ENST00000409472 DALRD3Q5D0E6 543 aaKnown RBP16.71■□□□□ 0.26
SCAMP4-202ENST00000409472 TMCO3Q6UWJ1 677 aa16.71■□□□□ 0.26
SCAMP4-202ENST00000409472 C1orf186Q6ZWK4 172 aa16.71■□□□□ 0.26
SCAMP4-202ENST00000409472 DRC1Q96MC2 740 aa16.71■□□□□ 0.26
SCAMP4-202ENST00000409472 RHOXF2Q9BQY4 288 aa16.71■□□□□ 0.26
SCAMP4-202ENST00000409472 WDR11Q9BZH6 1224 aa16.71■□□□□ 0.26
SCAMP4-202ENST00000409472 AKR1B10O60218 316 aa16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 IPO7O95373 1038 aaKnown RBP16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 MOCS3O95396 460 aa16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 HSD17B4P51659 736 aa16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 ARID5AQ03989 594 aa16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 PRAMEF18Q5VWM3 479 aa16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 B3GNT9Q6UX72 402 aa16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 ZNF662Q6ZS27 426 aa16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 CEP112Q8N8E3 955 aa16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 JDP2Q8WYK2 163 aa16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 FIZ1Q96SL8 496 aa16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 MMS19Q96T76 1030 aa16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 LXNQ9BS40 222 aa16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 GANQ9H2C0 597 aa16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 DEF6Q9H4E7 631 aa16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 CEP72Q9P209 647 aa16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 IPO5O00410 1097 aaKnown RBP16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 CETN3O15182 167 aa16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 TGFB1I1O43294 461 aa16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 TBC1D8O95759 1140 aa16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 NR3C1P04150 777 aa16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 ALAS1P13196 640 aa16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 SLC9A1P19634 815 aa16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 HOXA7P31268 230 aaPredicted RBP16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 MTMR2Q13614 643 aa16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 DCAF17Q5H9S7 520 aaPredicted RBP16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 DPY19L2P1Q6NXN4 242 aa16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 MICALL2Q8IY33 904 aa16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 SH2D3AQ9BRG2 576 aa16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 TUFT1Q9NNX1 390 aa16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 AJAP1Q9UKB5 411 aaPredicted RBP16.7■□□□□ 0.26
SCAMP4-202ENST00000409472 MYH11P35749 1972 aa16.69■□□□□ 0.26
SCAMP4-202ENST00000409472 FRMPD4Q14CM0 1322 aa16.69■□□□□ 0.26
SCAMP4-202ENST00000409472 PLA2G4AP47712 749 aa16.69■□□□□ 0.26
SCAMP4-202ENST00000409472 GMPSP49915 693 aaPredicted RBP16.69■□□□□ 0.26
SCAMP4-202ENST00000409472 GTF2A1P52655 376 aaPredicted RBP16.69■□□□□ 0.26
SCAMP4-202ENST00000409472 SPA17Q15506 151 aa16.69■□□□□ 0.26
SCAMP4-202ENST00000409472 WHAMMP3Q1A5X7 153 aa16.69■□□□□ 0.26
SCAMP4-202ENST00000409472 BMT2Q1RMZ1 405 aa16.69■□□□□ 0.26
SCAMP4-202ENST00000409472 TDRD12Q587J7 1177 aaKnown RBP16.69■□□□□ 0.26
SCAMP4-202ENST00000409472 VPS33BQ9H267 617 aa16.69■□□□□ 0.26
SCAMP4-202ENST00000409472 ARGLU1Q9NWB6 273 aaPredicted RBP16.69■□□□□ 0.26
SCAMP4-202ENST00000409472 CWC15Q9P013 229 aaKnown RBP16.69■□□□□ 0.26
SCAMP4-202ENST00000409472 PARP14Q460N5 1801 aa16.69■□□□□ 0.26
SCAMP4-202ENST00000409472 LCA5LO95447 670 aa16.69■□□□□ 0.26
SCAMP4-202ENST00000409472 GNA14O95837 355 aa16.69■□□□□ 0.26
SCAMP4-202ENST00000409472 KIF5AQ12840 1032 aa16.69■□□□□ 0.26
SCAMP4-202ENST00000409472 ITGB3BPQ13352 177 aaPredicted RBP16.69■□□□□ 0.26
SCAMP4-202ENST00000409472 RAPGEF1Q13905 1077 aa16.69■□□□□ 0.26
SCAMP4-202ENST00000409472 NBPF12Q5TAG4 269 aaPredicted RBP16.69■□□□□ 0.26
SCAMP4-202ENST00000409472 PPP4R3CPQ6ZMV5 832 aa16.69■□□□□ 0.26
SCAMP4-202ENST00000409472 MYCT1Q8N699 235 aa16.69■□□□□ 0.26
SCAMP4-202ENST00000409472 SLC16A10Q8TF71 515 aa16.69■□□□□ 0.26
SCAMP4-202ENST00000409472 IQCDQ96DY2 449 aa16.69■□□□□ 0.26
SCAMP4-202ENST00000409472 MXRA8Q9BRK3 442 aa16.69■□□□□ 0.26
SCAMP4-202ENST00000409472 KCNH7Q9NS40 1196 aa16.69■□□□□ 0.26
SCAMP4-202ENST00000409472 RPTORQ8N122 1335 aa16.68■□□□□ 0.26
SCAMP4-202ENST00000409472 CTAGE15A4D2H0 777 aa16.68■□□□□ 0.26
SCAMP4-202ENST00000409472 TMEM150BA6NC51 233 aa16.68■□□□□ 0.26
SCAMP4-202ENST00000409472 PDE2AO00408 941 aaPredicted RBP16.68■□□□□ 0.26
SCAMP4-202ENST00000409472 CLGNO14967 610 aa16.68■□□□□ 0.26
SCAMP4-202ENST00000409472 FAM13AO94988 1023 aa16.68■□□□□ 0.26
SCAMP4-202ENST00000409472 CTAGE8P0CG41 777 aa16.68■□□□□ 0.26
SCAMP4-202ENST00000409472 VCAM1P19320 739 aa16.68■□□□□ 0.26
SCAMP4-202ENST00000409472 NOP2P46087 812 aaKnown RBP16.68■□□□□ 0.26
SCAMP4-202ENST00000409472 ZNF280AP59817 542 aaPredicted RBP16.68■□□□□ 0.26
SCAMP4-202ENST00000409472 MRPS9P82933 396 aaKnown RBP16.68■□□□□ 0.26
SCAMP4-202ENST00000409472 SPP2Q13103 211 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms