RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 FLOT1O75955 427 aa14.65□□□□□ -0.06
COL6A2-204ENST00000409416 DDX42Q86XP3 938 aaKnown RBP eCLIP14.65□□□□□ -0.06
COL6A2-204ENST00000409416 BCAS4Q8TDM0 211 aa14.65□□□□□ -0.06
COL6A2-204ENST00000409416 ZNF341Q9BYN7 854 aa14.65□□□□□ -0.06
COL6A2-204ENST00000409416 ATP6V0A2Q9Y487 856 aa14.65□□□□□ -0.06
COL6A2-204ENST00000409416 ANO9A1A5B4 782 aa14.64□□□□□ -0.07
COL6A2-204ENST00000409416 NF2P35240 595 aa14.64□□□□□ -0.07
COL6A2-204ENST00000409416 JAG1P78504 1218 aa14.64□□□□□ -0.07
COL6A2-204ENST00000409416 SF3B2Q13435 895 aaKnown RBP14.64□□□□□ -0.07
COL6A2-204ENST00000409416 CENPPQ6IPU0 288 aa14.64□□□□□ -0.07
COL6A2-204ENST00000409416 APOBEC3HQ6NTF7 200 aaKnown RBP14.64□□□□□ -0.07
COL6A2-204ENST00000409416 RABGAP1Q9Y3P9 1069 aa14.64□□□□□ -0.07
COL6A2-204ENST00000409416 KRT14P02533 472 aa14.64□□□□□ -0.07
COL6A2-204ENST00000409416 TCP1P17987 556 aaKnown RBP14.64□□□□□ -0.07
COL6A2-204ENST00000409416 PDE6BP35913 854 aa14.64□□□□□ -0.07
COL6A2-204ENST00000409416 KCNH2Q12809 1159 aa14.64□□□□□ -0.07
COL6A2-204ENST00000409416 EPC2Q52LR7 807 aa14.64□□□□□ -0.07
COL6A2-204ENST00000409416 RC3H1Q5TC82 1133 aaKnown RBP14.64□□□□□ -0.07
COL6A2-204ENST00000409416 SYDE2Q5VT97 1194 aa14.64□□□□□ -0.07
COL6A2-204ENST00000409416 SPIRE2Q8WWL2 714 aa14.64□□□□□ -0.07
COL6A2-204ENST00000409416 REEP2Q9BRK0 252 aa14.64□□□□□ -0.07
COL6A2-204ENST00000409416 TSPYL1Q9H0U9 437 aa14.64□□□□□ -0.07
COL6A2-204ENST00000409416 MKRN1Q9UHC7 482 aaKnown RBP14.64□□□□□ -0.07
COL6A2-204ENST00000409416 COL4A3BPQ9Y5P4 624 aa14.64□□□□□ -0.07
COL6A2-204ENST00000409416 ARHGEF35A5YM69 484 aa14.64□□□□□ -0.07
COL6A2-204ENST00000409416 HEXIM1O94992 359 aaKnown RBP14.64□□□□□ -0.07
COL6A2-204ENST00000409416 XRCC5P13010 732 aaKnown RBP14.64□□□□□ -0.07
COL6A2-204ENST00000409416 FKBP3Q00688 224 aaKnown RBP14.64□□□□□ -0.07
COL6A2-204ENST00000409416 AKT1S1Q96B36 256 aa14.64□□□□□ -0.07
COL6A2-204ENST00000409416 HDAC9Q9UKV0 1011 aa14.64□□□□□ -0.07
COL6A2-204ENST00000409416 CCPG1Q9ULG6 757 aa14.64□□□□□ -0.07
COL6A2-204ENST00000409416 GINS2Q9Y248 185 aa14.64□□□□□ -0.07
COL6A2-204ENST00000409416 TULP2O00295 520 aa14.63□□□□□ -0.07
COL6A2-204ENST00000409416 LIG3P49916 1009 aa14.63□□□□□ -0.07
COL6A2-204ENST00000409416 PDCLQ13371 301 aa14.63□□□□□ -0.07
COL6A2-204ENST00000409416 CATSPER3Q86XQ3 398 aa14.63□□□□□ -0.07
COL6A2-204ENST00000409416 PROM2Q8N271 834 aa14.63□□□□□ -0.07
COL6A2-204ENST00000409416 CAPS2Q9BXY5 557 aa14.63□□□□□ -0.07
COL6A2-204ENST00000409416 SIK3Q9Y2K2 1263 aa14.63□□□□□ -0.07
COL6A2-204ENST00000409416 PLCH1Q4KWH8 1693 aa14.63□□□□□ -0.07
COL6A2-204ENST00000409416 FAM86B1E9PN63 330 aa14.63□□□□□ -0.07
COL6A2-204ENST00000409416 FAM86B2P0C5J1 330 aa14.63□□□□□ -0.07
COL6A2-204ENST00000409416 NPR1P16066 1061 aa14.63□□□□□ -0.07
COL6A2-204ENST00000409416 TTLL12Q14166 644 aaPredicted RBP14.63□□□□□ -0.07
COL6A2-204ENST00000409416 NBPF9Q3BBW0 867 aa14.63□□□□□ -0.07
COL6A2-204ENST00000409416 CFAP221Q4G0U5 840 aa14.63□□□□□ -0.07
COL6A2-204ENST00000409416 CFAP58Q5T655 872 aa14.63□□□□□ -0.07
COL6A2-204ENST00000409416 PDXDC1Q6P996 788 aa14.63□□□□□ -0.07
COL6A2-204ENST00000409416 FAM178BQ8IXR5 827 aa14.63□□□□□ -0.07
COL6A2-204ENST00000409416 TSEN2Q8NCE0 465 aaKnown RBP14.63□□□□□ -0.07
COL6A2-204ENST00000409416 LUC7LQ9NQ29 371 aaKnown RBP14.63□□□□□ -0.07
COL6A2-204ENST00000409416 GPRC5CQ9NQ84 441 aa14.63□□□□□ -0.07
COL6A2-204ENST00000409416 STIM2Q9P246 746 aa14.63□□□□□ -0.07
COL6A2-204ENST00000409416 A0A1W2PRG0 241 aa14.63□□□□□ -0.07
COL6A2-204ENST00000409416 PPP1R2P41236 205 aa14.63□□□□□ -0.07
COL6A2-204ENST00000409416 CARSP49589 748 aaKnown RBP14.63□□□□□ -0.07
COL6A2-204ENST00000409416 FAM102BQ5T8I3 360 aa14.63□□□□□ -0.07
COL6A2-204ENST00000409416 SAMD7Q7Z3H4 446 aa14.63□□□□□ -0.07
COL6A2-204ENST00000409416 GUF1Q8N442 669 aaKnown RBP14.63□□□□□ -0.07
COL6A2-204ENST00000409416 ARL8AQ96BM9 186 aa14.63□□□□□ -0.07
COL6A2-204ENST00000409416 ZNF577Q9BSK1 485 aa14.63□□□□□ -0.07
COL6A2-204ENST00000409416 RUSC1Q9BVN2 902 aa14.63□□□□□ -0.07
COL6A2-204ENST00000409416 ADAM33Q9BZ11 813 aa14.63□□□□□ -0.07
COL6A2-204ENST00000409416 STK17AQ9UEE5 414 aa14.63□□□□□ -0.07
COL6A2-204ENST00000409416 TARSL2A2RTX5 802 aaKnown RBP14.62□□□□□ -0.07
COL6A2-204ENST00000409416 K7ENM7 598 aa14.62□□□□□ -0.07
COL6A2-204ENST00000409416 BUB1BO60566 1050 aaPredicted RBP14.62□□□□□ -0.07
COL6A2-204ENST00000409416 MTM1Q13496 603 aa14.62□□□□□ -0.07
COL6A2-204ENST00000409416 TRADDQ15628 312 aa14.62□□□□□ -0.07
COL6A2-204ENST00000409416 DAAM2Q86T65 1068 aa14.62□□□□□ -0.07
COL6A2-204ENST00000409416 GCNT4Q9P109 453 aa14.62□□□□□ -0.07
COL6A2-204ENST00000409416 EML1O00423 815 aa14.62□□□□□ -0.07
COL6A2-204ENST00000409416 ATMINO43313 823 aaPredicted RBP14.62□□□□□ -0.07
COL6A2-204ENST00000409416 KLRC1P26715 233 aa14.62□□□□□ -0.07
COL6A2-204ENST00000409416 HAS1Q92839 578 aa14.62□□□□□ -0.07
COL6A2-204ENST00000409416 SAAL1Q96ER3 474 aa14.62□□□□□ -0.07
COL6A2-204ENST00000409416 MASTLQ96GX5 879 aa14.62□□□□□ -0.07
COL6A2-204ENST00000409416 KRT5P13647 590 aa14.62□□□□□ -0.07
COL6A2-204ENST00000409416 PPP4CP60510 307 aa14.62□□□□□ -0.07
COL6A2-204ENST00000409416 EXOC3L4Q17RC7 722 aa14.62□□□□□ -0.07
COL6A2-204ENST00000409416 GPATCH4Q5T3I0 446 aaKnown RBP14.62□□□□□ -0.07
COL6A2-204ENST00000409416 HS2ST1Q7LGA3 356 aa14.62□□□□□ -0.07
COL6A2-204ENST00000409416 SP8Q8IXZ3 490 aa14.62□□□□□ -0.07
COL6A2-204ENST00000409416 PPM1KQ8N3J5 372 aa14.62□□□□□ -0.07
COL6A2-204ENST00000409416 UBLCP1Q8WVY7 318 aaPredicted RBP14.62□□□□□ -0.07
COL6A2-204ENST00000409416 FAM118BQ9BPY3 351 aa14.62□□□□□ -0.07
COL6A2-204ENST00000409416 OPA1O60313 960 aa14.61□□□□□ -0.07
COL6A2-204ENST00000409416 GCLMP48507 274 aa14.61□□□□□ -0.07
COL6A2-204ENST00000409416 STAT2P52630 851 aa14.61□□□□□ -0.07
COL6A2-204ENST00000409416 NPEPPSP55786 919 aa14.61□□□□□ -0.07
COL6A2-204ENST00000409416 LRRC63Q05C16 580 aa14.61□□□□□ -0.07
COL6A2-204ENST00000409416 TTC31Q49AM3 519 aaPredicted RBP14.61□□□□□ -0.07
COL6A2-204ENST00000409416 CAPN12Q6ZSI9 719 aa14.61□□□□□ -0.07
COL6A2-204ENST00000409416 DNAJC18Q9H819 358 aa14.61□□□□□ -0.07
COL6A2-204ENST00000409416 PRR12Q9ULL5 1215 aa14.61□□□□□ -0.07
COL6A2-204ENST00000409416 CASZ1Q86V15 1759 aa14.61□□□□□ -0.07
COL6A2-204ENST00000409416 ARAP2Q8WZ64 1704 aa14.61□□□□□ -0.07
COL6A2-204ENST00000409416 A0A087X0T9 212 aa14.61□□□□□ -0.07
COL6A2-204ENST00000409416 AGPSO00116 658 aa14.61□□□□□ -0.07
COL6A2-204ENST00000409416 EBAG9O00559 213 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms