RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 RRN3P2A6NIE6 340 aa19.18■□□□□ 0.66
CHMP3-203ENST00000409225 GALR2O43603 387 aaPredicted RBP19.18■□□□□ 0.66
CHMP3-203ENST00000409225 RPLP2P05387 115 aaKnown RBP19.18■□□□□ 0.66
CHMP3-203ENST00000409225 ERVFC1P60507 584 aa19.18■□□□□ 0.66
CHMP3-203ENST00000409225 UBE3AQ05086 875 aa19.18■□□□□ 0.66
CHMP3-203ENST00000409225 TMEM266Q2M3C6 531 aa19.18■□□□□ 0.66
CHMP3-203ENST00000409225 GPRASP2Q96D09 838 aa19.18■□□□□ 0.66
CHMP3-203ENST00000409225 CDCA3Q99618 268 aaPredicted RBP19.18■□□□□ 0.66
CHMP3-203ENST00000409225 TMX1Q9H3N1 280 aa19.18■□□□□ 0.66
CHMP3-203ENST00000409225 PCDHB7Q9Y5E2 793 aa19.18■□□□□ 0.66
CHMP3-203ENST00000409225 IGSF9BQ9UPX0 1349 aa19.18■□□□□ 0.66
CHMP3-203ENST00000409225 PTPRZ1P23471 2315 aaPredicted RBP19.17■□□□□ 0.66
CHMP3-203ENST00000409225 MYO15AQ9UKN7 3530 aa19.17■□□□□ 0.66
CHMP3-203ENST00000409225 TBKBP1A7MCY6 615 aa19.17■□□□□ 0.66
CHMP3-203ENST00000409225 IFIT3O14879 490 aaKnown RBP19.17■□□□□ 0.66
CHMP3-203ENST00000409225 FGF18O76093 207 aa19.17■□□□□ 0.66
CHMP3-203ENST00000409225 TECP42680 631 aa19.17■□□□□ 0.66
CHMP3-203ENST00000409225 HDAC1Q13547 482 aaPredicted RBP19.17■□□□□ 0.66
CHMP3-203ENST00000409225 LLGL2Q6P1M3 1020 aa19.17■□□□□ 0.66
CHMP3-203ENST00000409225 THNSL1Q8IYQ7 743 aa19.17■□□□□ 0.66
CHMP3-203ENST00000409225 TRAPPC12Q8WVT3 735 aa19.17■□□□□ 0.66
CHMP3-203ENST00000409225 CDHR1Q96JP9 859 aa19.17■□□□□ 0.66
CHMP3-203ENST00000409225 S1PR5Q9H228 398 aa19.17■□□□□ 0.66
CHMP3-203ENST00000409225 AAASQ9NRG9 546 aa19.17■□□□□ 0.66
CHMP3-203ENST00000409225 HCSTQ9UBK5 93 aa19.17■□□□□ 0.66
CHMP3-203ENST00000409225 TRPC6Q9Y210 931 aa19.17■□□□□ 0.66
CHMP3-203ENST00000409225 FSD2A1L4K1 749 aa19.16■□□□□ 0.66
CHMP3-203ENST00000409225 PROB1E7EW31 1015 aa19.16■□□□□ 0.66
CHMP3-203ENST00000409225 HIP1O00291 1037 aa19.16■□□□□ 0.66
CHMP3-203ENST00000409225 MEIS2O14770 477 aa19.16■□□□□ 0.66
CHMP3-203ENST00000409225 SRGAP2BP0DMP2 458 aa19.16■□□□□ 0.66
CHMP3-203ENST00000409225 SARSP49591 514 aaKnown RBP19.16■□□□□ 0.66
CHMP3-203ENST00000409225 NUBP1P53384 320 aa19.16■□□□□ 0.66
CHMP3-203ENST00000409225 PLPP4Q5VZY2 271 aa19.16■□□□□ 0.66
CHMP3-203ENST00000409225 ANKRD54Q6NXT1 300 aa19.16■□□□□ 0.66
CHMP3-203ENST00000409225 KREMEN2Q8NCW0 462 aa19.16■□□□□ 0.66
CHMP3-203ENST00000409225 CELF4Q9BZC1 486 aaKnown RBP19.16■□□□□ 0.66
CHMP3-203ENST00000409225 TSHZ2Q9NRE2 1034 aa19.16■□□□□ 0.66
CHMP3-203ENST00000409225 TMEM260Q9NX78 707 aa19.16■□□□□ 0.66
CHMP3-203ENST00000409225 SPTBN4Q9H254 2564 aa19.16■□□□□ 0.66
CHMP3-203ENST00000409225 LOXHD1Q8IVV2 1947 aa19.15■□□□□ 0.66
CHMP3-203ENST00000409225 ERICH2A1L162 156 aa19.15■□□□□ 0.66
CHMP3-203ENST00000409225 FSCN2O14926 492 aa19.15■□□□□ 0.66
CHMP3-203ENST00000409225 ITGB5P18084 799 aa19.15■□□□□ 0.66
CHMP3-203ENST00000409225 APOBRQ0VD83 1088 aa19.15■□□□□ 0.66
CHMP3-203ENST00000409225 TROAPQ12815 778 aa19.15■□□□□ 0.66
CHMP3-203ENST00000409225 NFX1Q12986 1120 aaKnown RBP19.15■□□□□ 0.66
CHMP3-203ENST00000409225 TRDNQ13061 729 aa19.15■□□□□ 0.66
CHMP3-203ENST00000409225 B4GALNT3Q6L9W6 998 aa19.15■□□□□ 0.66
CHMP3-203ENST00000409225 COLGALT1Q8NBJ5 622 aa19.15■□□□□ 0.66
CHMP3-203ENST00000409225 PCYT2Q99447 389 aa19.15■□□□□ 0.66
CHMP3-203ENST00000409225 PRR23AA6NEV1 266 aa19.14■□□□□ 0.65
CHMP3-203ENST00000409225 PIK3CDO00329 1044 aa19.14■□□□□ 0.65
CHMP3-203ENST00000409225 MGEA5O60502 916 aa19.14■□□□□ 0.65
CHMP3-203ENST00000409225 MTMR1Q13613 665 aa19.14■□□□□ 0.65
CHMP3-203ENST00000409225 WTAPQ15007 396 aa19.14■□□□□ 0.65
CHMP3-203ENST00000409225 FAM102BQ5T8I3 360 aa19.14■□□□□ 0.65
CHMP3-203ENST00000409225 SYCE2Q6PIF2 218 aa19.14■□□□□ 0.65
CHMP3-203ENST00000409225 PLEKHM2Q8IWE5 1019 aa19.14■□□□□ 0.65
CHMP3-203ENST00000409225 AZI2Q9H6S1 392 aa19.14■□□□□ 0.65
CHMP3-203ENST00000409225 TYW1Q9NV66 732 aaKnown RBP19.14■□□□□ 0.65
CHMP3-203ENST00000409225 CDH22Q9UJ99 828 aa19.14■□□□□ 0.65
CHMP3-203ENST00000409225 GINS2Q9Y248 185 aa19.14■□□□□ 0.65
CHMP3-203ENST00000409225 PCDHA2Q9Y5H9 948 aa19.14■□□□□ 0.65
CHMP3-203ENST00000409225 KRT76Q01546 638 aa19.13■□□□□ 0.65
CHMP3-203ENST00000409225 KCNC3Q14003 757 aa19.13■□□□□ 0.65
CHMP3-203ENST00000409225 PLCB4Q15147 1175 aa19.13■□□□□ 0.65
CHMP3-203ENST00000409225 PDE12Q6L8Q7 609 aaKnown RBP19.13■□□□□ 0.65
CHMP3-203ENST00000409225 TMEM184AQ6ZMB5 413 aa19.13■□□□□ 0.65
CHMP3-203ENST00000409225 CATIPQ7Z7H3 387 aa19.13■□□□□ 0.65
CHMP3-203ENST00000409225 TMEM105Q8N8V8 129 aa19.13■□□□□ 0.65
CHMP3-203ENST00000409225 RRP36Q96EU6 259 aaKnown RBP19.13■□□□□ 0.65
CHMP3-203ENST00000409225 IL25Q9H293 177 aa19.13■□□□□ 0.65
CHMP3-203ENST00000409225 ENTPD7Q9NQZ7 604 aa19.13■□□□□ 0.65
CHMP3-203ENST00000409225 NR2E1Q9Y466 385 aa19.13■□□□□ 0.65
CHMP3-203ENST00000409225 FNDC1Q4ZHG4 1894 aaPredicted RBP19.13■□□□□ 0.65
CHMP3-203ENST00000409225 KDM3AQ9Y4C1 1321 aa19.12■□□□□ 0.65
CHMP3-203ENST00000409225 DENND3A2RUS2 1198 aa19.12■□□□□ 0.65
CHMP3-203ENST00000409225 NBL1P41271 181 aa19.12■□□□□ 0.65
CHMP3-203ENST00000409225 MTMR3Q13615 1198 aa19.12■□□□□ 0.65
CHMP3-203ENST00000409225 PPP4R3CPQ6ZMV5 832 aa19.12■□□□□ 0.65
CHMP3-203ENST00000409225 ADAM2Q99965 735 aa19.12■□□□□ 0.65
CHMP3-203ENST00000409225 TCF25Q9BQ70 676 aa19.12■□□□□ 0.65
CHMP3-203ENST00000409225 ERVK-5Q9HDB9 667 aa19.12■□□□□ 0.65
CHMP3-203ENST00000409225 JPH1Q9HDC5 661 aaPredicted RBP19.12■□□□□ 0.65
CHMP3-203ENST00000409225 SEC63Q9UGP8 760 aaKnown RBP19.12■□□□□ 0.65
CHMP3-203ENST00000409225 NOC2LQ9Y3T9 749 aaKnown RBP19.12■□□□□ 0.65
CHMP3-203ENST00000409225 UBIAD1Q9Y5Z9 338 aa19.12■□□□□ 0.65
CHMP3-203ENST00000409225 DMDP11532 3685 aa19.12■□□□□ 0.65
CHMP3-203ENST00000409225 SMIM35A0A1B0GVV1 85 aa19.11■□□□□ 0.65
CHMP3-203ENST00000409225 RPS6KA5O75582 802 aa19.11■□□□□ 0.65
CHMP3-203ENST00000409225 BRD1O95696 1058 aa19.11■□□□□ 0.65
CHMP3-203ENST00000409225 UBE2SQ16763 222 aa19.11■□□□□ 0.65
CHMP3-203ENST00000409225 MTHFD1LQ6UB35 978 aa19.11■□□□□ 0.65
CHMP3-203ENST00000409225 UBALD2Q8IYN6 164 aa19.11■□□□□ 0.65
CHMP3-203ENST00000409225 MRPS27Q92552 414 aaKnown RBP19.11■□□□□ 0.65
CHMP3-203ENST00000409225 TNPO1Q92973 898 aaKnown RBP19.11■□□□□ 0.65
CHMP3-203ENST00000409225 SPZ1Q9BXG8 430 aa19.11■□□□□ 0.65
CHMP3-203ENST00000409225 SMOC2Q9H3U7 446 aa19.11■□□□□ 0.65
CHMP3-203ENST00000409225 OSBPL3Q9H4L5 887 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms