RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 STAT1P42224 750 aa13.84□□□□□ -0.19
PPP4R1-202ENST00000400555 ODR4Q5SWX8 454 aa13.84□□□□□ -0.19
PPP4R1-202ENST00000400555 FAM169AQ9Y6X4 670 aa13.84□□□□□ -0.19
PPP4R1-202ENST00000400555 FAM86B1E9PN63 330 aa13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 FAM86B2P0C5J1 330 aa13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 TNFAIP3P21580 790 aa13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 FIGNQ5HY92 759 aa13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 FAM186BQ8IYM0 893 aa13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 EDIL3O43854 480 aa13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 GNA14O95837 355 aa13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 KRT71Q3SY84 523 aa13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 RBM26Q5T8P6 1007 aaKnown RBP13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 LRCH2Q5VUJ6 765 aa13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 FAM178BQ8IXR5 827 aa13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 AENQ8WTP8 325 aaKnown RBP13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 HOOK2Q96ED9 719 aa13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 DYDC2Q96IM9 177 aa13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 CSRNP1Q96S65 589 aa13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 CEP89Q96ST8 783 aa13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 VIPAS39Q9H9C1 493 aa13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 ATP8A1Q9Y2Q0 1164 aa13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 ESYT2A0FGR8 921 aa13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 GRID2IPA4D2P6 1211 aa13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 GOLGA8KD6RF30 607 aa13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 GAS7O60861 476 aa13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 INPP5BP32019 993 aa13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 MNAT1P51948 309 aa13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 NAB2Q15742 525 aa13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 ARSHQ5FYA8 562 aa13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 TRIM59Q8IWR1 403 aa13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 PROM2Q8N271 834 aa13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 OSGEPQ9NPF4 335 aa13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 DOT1LQ8TEK3 1739 aa13.83□□□□□ -0.2
PPP4R1-202ENST00000400555 EP400Q96L91 3159 aa13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 GOLGA8IPA6NC78 632 aa13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 GOLGA8JA6NMD2 632 aa13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 NDUFB10O96000 172 aa13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 FGGP02679 453 aa13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 IL1R1P14778 569 aa13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 GCFC2P16383 781 aaKnown RBP13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 SSR1P43307 286 aaKnown RBP13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 EMBQ6PCB8 327 aa13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 BANK1Q8NDB2 785 aa13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 CTNNBL1Q8WYA6 563 aaPredicted RBP13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 CCDC127Q96BQ5 260 aa13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 RNPC3Q96LT9 517 aaKnown RBP13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 SELENOSQ9BQE4 189 aa13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 CTTNBP2NLQ9P2B4 639 aa13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 CAPN7Q9Y6W3 813 aa13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 ECE1P42892 770 aa13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 IFT88Q13099 833 aa13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 TMEM119Q4V9L6 283 aa13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 TTMPQ5BVD1 217 aa13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 PPP4R3AQ6IN85 833 aa13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 SLFN12Q8IYM2 578 aa13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 TRIM51Q9BSJ1 452 aa13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 COA1Q9GZY4 146 aa13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 NUCKS1Q9H1E3 243 aaKnown RBP13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 TMOD4Q9NZQ9 345 aa13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 SSU72P8A0A1W2PR75 194 aa13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 EML1O00423 815 aa13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 SART1O43290 800 aaKnown RBP13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 ERLIN2O94905 339 aa13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 TMOD1P28289 359 aa13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 GJC1P36383 396 aa13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 FBXW10Q5XX13 1052 aa13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 SNED1Q8TER0 1413 aa13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 EIF2AK1Q9BQI3 630 aaKnown RBP13.82□□□□□ -0.2
PPP4R1-202ENST00000400555 GCOM1H8Y6P7 765 aaPredicted RBP13.81□□□□□ -0.2
PPP4R1-202ENST00000400555 TTI1O43156 1089 aa13.81□□□□□ -0.2
PPP4R1-202ENST00000400555 MMP10P09238 476 aa13.81□□□□□ -0.2
PPP4R1-202ENST00000400555 MYZAPP0CAP1 466 aa13.81□□□□□ -0.2
PPP4R1-202ENST00000400555 BMP3P12645 472 aa13.81□□□□□ -0.2
PPP4R1-202ENST00000400555 NR1D1P20393 614 aa13.81□□□□□ -0.2
PPP4R1-202ENST00000400555 GIT2Q14161 759 aa13.81□□□□□ -0.2
PPP4R1-202ENST00000400555 FRMD4BQ9Y2L6 1034 aa13.81□□□□□ -0.2
PPP4R1-202ENST00000400555 PON1P27169 355 aa13.81□□□□□ -0.2
PPP4R1-202ENST00000400555 SLCO1A2P46721 670 aa13.81□□□□□ -0.2
PPP4R1-202ENST00000400555 IFI16Q16666 785 aaKnown RBP13.81□□□□□ -0.2
PPP4R1-202ENST00000400555 SYDE2Q5VT97 1194 aa13.81□□□□□ -0.2
PPP4R1-202ENST00000400555 SWAP70Q9UH65 585 aa13.81□□□□□ -0.2
PPP4R1-202ENST00000400555 TSKSQ9UJT2 592 aa13.81□□□□□ -0.2
PPP4R1-202ENST00000400555 DNAJC12Q9UKB3 198 aa13.81□□□□□ -0.2
PPP4R1-202ENST00000400555 PTPN22Q9Y2R2 807 aa13.81□□□□□ -0.2
PPP4R1-202ENST00000400555 CTDP1Q9Y5B0 961 aaPredicted RBP13.81□□□□□ -0.2
PPP4R1-202ENST00000400555 KIF4AO95239 1232 aa13.81□□□□□ -0.2
PPP4R1-202ENST00000400555 CDK17Q00537 523 aa13.81□□□□□ -0.2
PPP4R1-202ENST00000400555 DHX9Q08211 1270 aaKnown RBP13.81□□□□□ -0.2
PPP4R1-202ENST00000400555 VPS72Q15906 364 aa13.81□□□□□ -0.2
PPP4R1-202ENST00000400555 RNF10Q8N5U6 811 aaKnown RBP13.81□□□□□ -0.2
PPP4R1-202ENST00000400555 METTL13Q8N6R0 699 aa13.81□□□□□ -0.2
PPP4R1-202ENST00000400555 IQCDQ96DY2 449 aa13.81□□□□□ -0.2
PPP4R1-202ENST00000400555 CEP63Q96MT8 703 aa13.81□□□□□ -0.2
PPP4R1-202ENST00000400555 PI4KBQ9UBF8 816 aa13.81□□□□□ -0.2
PPP4R1-202ENST00000400555 NAGPAQ9UK23 515 aa13.81□□□□□ -0.2
PPP4R1-202ENST00000400555 NOVA2Q9UNW9 492 aaKnown RBP13.81□□□□□ -0.2
PPP4R1-202ENST00000400555 ARHGEF35A5YM69 484 aa13.8□□□□□ -0.2
PPP4R1-202ENST00000400555 PLTPP55058 493 aa13.8□□□□□ -0.2
PPP4R1-202ENST00000400555 DRAP1Q14919 205 aaPredicted RBP13.8□□□□□ -0.2
PPP4R1-202ENST00000400555 DNAJC17Q9NVM6 304 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms