RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 TRIM49BA6NDI0 452 aa18.51■□□□□ 0.55
SIN3A-203ENST00000394949 RASSF10A6NK89 507 aa18.51■□□□□ 0.55
SIN3A-203ENST00000394949 PPEF1O14829 653 aaPredicted RBP18.51■□□□□ 0.55
SIN3A-203ENST00000394949 TTLL1O95922 423 aa18.51■□□□□ 0.55
SIN3A-203ENST00000394949 PLS3P13797 630 aa18.51■□□□□ 0.55
SIN3A-203ENST00000394949 YARSP54577 528 aaKnown RBP18.51■□□□□ 0.55
SIN3A-203ENST00000394949 CCNI2Q6ZMN8 369 aaPredicted RBP18.51■□□□□ 0.55
SIN3A-203ENST00000394949 METTL13Q8N6R0 699 aa18.51■□□□□ 0.55
SIN3A-203ENST00000394949 PCDHB4Q9Y5E5 795 aa18.51■□□□□ 0.55
SIN3A-203ENST00000394949 SHROOM2Q13796 1616 aa18.51■□□□□ 0.55
SIN3A-203ENST00000394949 DPF2Q92785 391 aa18.51■□□□□ 0.55
SIN3A-203ENST00000394949 TUBE1Q9UJT0 475 aa18.51■□□□□ 0.55
SIN3A-203ENST00000394949 RASA4BC9J798 803 aa18.5■□□□□ 0.55
SIN3A-203ENST00000394949 H7C1W4 665 aa18.5■□□□□ 0.55
SIN3A-203ENST00000394949 CLIC2O15247 247 aa18.5■□□□□ 0.55
SIN3A-203ENST00000394949 RASA4O43374 803 aa18.5■□□□□ 0.55
SIN3A-203ENST00000394949 STX1BP61266 288 aa18.5■□□□□ 0.55
SIN3A-203ENST00000394949 PPWD1Q96BP3 646 aaKnown RBP18.5■□□□□ 0.55
SIN3A-203ENST00000394949 PARVGQ9HBI0 331 aa18.5■□□□□ 0.55
SIN3A-203ENST00000394949 MYO5CQ9NQX4 1742 aa18.5■□□□□ 0.55
SIN3A-203ENST00000394949 TTI1O43156 1089 aa18.5■□□□□ 0.55
SIN3A-203ENST00000394949 TMOD1P28289 359 aa18.5■□□□□ 0.55
SIN3A-203ENST00000394949 PROCA1Q8NCQ7 364 aaPredicted RBP18.5■□□□□ 0.55
SIN3A-203ENST00000394949 ZNF473Q8WTR7 871 aaKnown RBP18.5■□□□□ 0.55
SIN3A-203ENST00000394949 PYROXD1Q8WU10 500 aa18.5■□□□□ 0.55
SIN3A-203ENST00000394949 OLFM3Q96PB7 478 aa18.5■□□□□ 0.55
SIN3A-203ENST00000394949 ZFP69BQ9UJL9 534 aa18.5■□□□□ 0.55
SIN3A-203ENST00000394949 TMEM191BP0C7N4 346 aa18.5■□□□□ 0.55
SIN3A-203ENST00000394949 FAM83BQ5T0W9 1011 aa18.5■□□□□ 0.55
SIN3A-203ENST00000394949 JADE1Q6IE81 842 aa18.5■□□□□ 0.55
SIN3A-203ENST00000394949 PI16Q6UXB8 463 aa18.5■□□□□ 0.55
SIN3A-203ENST00000394949 BEGAINQ9BUH8 593 aa18.5■□□□□ 0.55
SIN3A-203ENST00000394949 ECT2Q9H8V3 914 aa18.5■□□□□ 0.55
SIN3A-203ENST00000394949 QTRT2Q9H974 415 aaKnown RBP18.5■□□□□ 0.55
SIN3A-203ENST00000394949 ZNF277Q9NRM2 450 aaPredicted RBP18.5■□□□□ 0.55
SIN3A-203ENST00000394949 HPCAL4Q9UM19 191 aa18.5■□□□□ 0.55
SIN3A-203ENST00000394949 ELF1P32519 619 aa18.49■□□□□ 0.55
SIN3A-203ENST00000394949 SATB1Q01826 763 aa18.49■□□□□ 0.55
SIN3A-203ENST00000394949 GFPT1Q06210 699 aaPredicted RBP18.49■□□□□ 0.55
SIN3A-203ENST00000394949 BYSLQ13895 437 aaKnown RBP18.49■□□□□ 0.55
SIN3A-203ENST00000394949 EPM2AIP1Q7L775 607 aaPredicted RBP18.49■□□□□ 0.55
SIN3A-203ENST00000394949 METTL16Q86W50 562 aaKnown RBP18.49■□□□□ 0.55
SIN3A-203ENST00000394949 MORC4Q8TE76 937 aa18.49■□□□□ 0.55
SIN3A-203ENST00000394949 TRAIPQ9BWF2 469 aa18.49■□□□□ 0.55
SIN3A-203ENST00000394949 BRIP1Q9BX63 1249 aa18.49■□□□□ 0.55
SIN3A-203ENST00000394949 SEC31BQ9NQW1 1179 aa18.49■□□□□ 0.55
SIN3A-203ENST00000394949 PRR36Q9H6K5 1346 aa18.49■□□□□ 0.55
SIN3A-203ENST00000394949 MTF1Q14872 753 aa18.49■□□□□ 0.55
SIN3A-203ENST00000394949 PIGSQ96S52 555 aa18.49■□□□□ 0.55
SIN3A-203ENST00000394949 ETNK1Q9HBU6 452 aa18.49■□□□□ 0.55
SIN3A-203ENST00000394949 PIH1D3Q9NQM4 214 aaKnown RBP18.49■□□□□ 0.55
SIN3A-203ENST00000394949 GSTA1P08263 222 aa18.49■□□□□ 0.55
SIN3A-203ENST00000394949 GSTA2P09210 222 aa18.49■□□□□ 0.55
SIN3A-203ENST00000394949 HDLBPQ00341 1268 aaKnown RBP18.49■□□□□ 0.55
SIN3A-203ENST00000394949 KCNB1Q14721 858 aa18.49■□□□□ 0.55
SIN3A-203ENST00000394949 EAPPQ56P03 285 aaPredicted RBP18.49■□□□□ 0.55
SIN3A-203ENST00000394949 CRLF3Q8IUI8 442 aa18.49■□□□□ 0.55
SIN3A-203ENST00000394949 CCT8L2Q96SF2 557 aa18.49■□□□□ 0.55
SIN3A-203ENST00000394949 DHX36Q9H2U1 1008 aaKnown RBP18.49■□□□□ 0.55
SIN3A-203ENST00000394949 ESYT3A0FGR9 886 aa18.49■□□□□ 0.55
SIN3A-203ENST00000394949 HNRNPDLO14979 420 aaKnown RBP18.49■□□□□ 0.55
SIN3A-203ENST00000394949 HNRNPCL1O60812 293 aaKnown RBP18.49■□□□□ 0.55
SIN3A-203ENST00000394949 MX2P20592 715 aa18.49■□□□□ 0.55
SIN3A-203ENST00000394949 GUCY1A3Q02108 690 aa18.49■□□□□ 0.55
SIN3A-203ENST00000394949 ALX1Q15699 326 aa18.49■□□□□ 0.55
SIN3A-203ENST00000394949 GRAMD1BQ3KR37 738 aa18.49■□□□□ 0.55
SIN3A-203ENST00000394949 DCPSQ96C86 337 aaKnown RBP18.49■□□□□ 0.55
SIN3A-203ENST00000394949 KIF1BO60333 1816 aa18.49■□□□□ 0.55
SIN3A-203ENST00000394949 KRT37O76014 449 aa18.48■□□□□ 0.55
SIN3A-203ENST00000394949 HAUS5O94927 633 aa18.48■□□□□ 0.55
SIN3A-203ENST00000394949 PPP2R5CQ13362 524 aa18.48■□□□□ 0.55
SIN3A-203ENST00000394949 TMED1Q13445 227 aa18.48■□□□□ 0.55
SIN3A-203ENST00000394949 DHX34Q14147 1143 aaKnown RBP18.48■□□□□ 0.55
SIN3A-203ENST00000394949 NCAPD2Q15021 1401 aa18.48■□□□□ 0.55
SIN3A-203ENST00000394949 PFKFB3Q16875 520 aaPredicted RBP18.48■□□□□ 0.55
SIN3A-203ENST00000394949 SGMS1Q86VZ5 419 aa18.48■□□□□ 0.55
SIN3A-203ENST00000394949 TAB3Q8N5C8 712 aaPredicted RBP18.48■□□□□ 0.55
SIN3A-203ENST00000394949 ATP6V0A1Q93050 837 aa18.48■□□□□ 0.55
SIN3A-203ENST00000394949 THRAP3Q9Y2W1 955 aaKnown RBP18.48■□□□□ 0.55
SIN3A-203ENST00000394949 A6NJR5 290 aa18.48■□□□□ 0.55
SIN3A-203ENST00000394949 H0Y3Z8 333 aa18.48■□□□□ 0.55
SIN3A-203ENST00000394949 KPNA2P52292 529 aaKnown RBP18.48■□□□□ 0.55
SIN3A-203ENST00000394949 MDM2Q00987 491 aaPredicted RBP18.48■□□□□ 0.55
SIN3A-203ENST00000394949 CACNB1Q02641 598 aaPredicted RBP18.48■□□□□ 0.55
SIN3A-203ENST00000394949 DNAJC24Q6P3W2 148 aa18.48■□□□□ 0.55
SIN3A-203ENST00000394949 WDR75Q8IWA0 830 aaKnown RBP18.48■□□□□ 0.55
SIN3A-203ENST00000394949 MMS19Q96T76 1030 aa18.48■□□□□ 0.55
SIN3A-203ENST00000394949 LCMT1Q9UIC8 334 aa18.48■□□□□ 0.55
SIN3A-203ENST00000394949 GGPS1O95749 300 aa18.48■□□□□ 0.55
SIN3A-203ENST00000394949 TBC1D10CQ8IV04 446 aa18.48■□□□□ 0.55
SIN3A-203ENST00000394949 GUF1Q8N442 669 aaKnown RBP18.48■□□□□ 0.55
SIN3A-203ENST00000394949 MAML1Q92585 1016 aa18.48■□□□□ 0.55
SIN3A-203ENST00000394949 SUGCTQ9HAC7 445 aa18.48■□□□□ 0.55
SIN3A-203ENST00000394949 BAG5Q9UL15 447 aa18.48■□□□□ 0.55
SIN3A-203ENST00000394949 TRPA1O75762 1119 aa18.48■□□□□ 0.55
SIN3A-203ENST00000394949 NRBF2Q96F24 287 aa18.48■□□□□ 0.55
SIN3A-203ENST00000394949 FBXL5Q9UKA1 691 aa18.48■□□□□ 0.55
SIN3A-203ENST00000394949 PLEKHA8P1O95397 391 aa18.47■□□□□ 0.55
SIN3A-203ENST00000394949 H2AFXP16104 143 aaPredicted RBP18.47■□□□□ 0.55
SIN3A-203ENST00000394949 ECE1P42892 770 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms