RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 CXorf56Q9H5V9 222 aa14.41□□□□□ -0.1
NFKB1-202ENST00000394820 SART1O43290 800 aaKnown RBP14.4□□□□□ -0.1
NFKB1-202ENST00000394820 DENND2CQ68D51 928 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 NSMFQ6X4W1 530 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 SPATA20Q8TB22 786 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 TBC1D22AQ8WUA7 517 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 FAM53CQ9NYF3 392 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 USTQ9Y2C2 406 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 POTEFA5A3E0 1075 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 FLOT1O75955 427 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 MMP10P09238 476 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 POTEIP0CG38 1075 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 TTMPQ5BVD1 217 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 POTEGQ6S5H5 508 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 POTEEQ6S8J3 1075 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 GSTA5Q7RTV2 222 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 ADGRF4Q8IZF3 695 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 C4orf32Q8N8J7 132 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 CASKIN2Q8WXE0 1202 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 ELMO3Q96BJ8 720 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 SEMA6BQ9H3T3 888 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 PSTPIP2Q9H939 334 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 EMILIN3Q9NT22 766 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 AMFRQ9UKV5 643 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 C4AP0C0L4 1744 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 C4BP0C0L5 1744 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 APBA3O96018 575 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 MYO1EQ12965 1108 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 HAUS3Q68CZ6 603 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 CREG2Q8IUH2 290 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 LRRC15Q8TF66 581 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 DUSP9Q99956 384 aaKnown RBP14.4□□□□□ -0.1
NFKB1-202ENST00000394820 INTS9Q9NV88 658 aaKnown RBP14.4□□□□□ -0.1
NFKB1-202ENST00000394820 MTMR4Q9NYA4 1195 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 ABCA3Q99758 1704 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 PCNTO95613 3336 aa14.4□□□□□ -0.1
NFKB1-202ENST00000394820 CFBP00751 764 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 HOXA13P31271 388 aaPredicted RBP14.39□□□□□ -0.11
NFKB1-202ENST00000394820 RHBDL3P58872 404 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 PPP4CP60510 307 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 KCNH2Q12809 1159 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 UAP1Q16222 522 aaPredicted RBP14.39□□□□□ -0.11
NFKB1-202ENST00000394820 GIMAP8Q8ND71 665 aaPredicted RBP14.39□□□□□ -0.11
NFKB1-202ENST00000394820 KAT2BQ92831 832 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 GLG1Q92896 1179 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 TEKT1Q969V4 418 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 CCDC127Q96BQ5 260 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 NCAPGQ9BPX3 1015 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 LZTS2Q9BRK4 669 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 KLC4Q9NSK0 619 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 PNMA2Q9UL42 364 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 ZNF263O14978 683 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 ITGA4P13612 1032 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 GCKP35557 465 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 FAM47EQ6ZV65 393 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 APTXQ7Z2E3 356 aaKnown RBP14.39□□□□□ -0.11
NFKB1-202ENST00000394820 GLYCTKQ8IVS8 523 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 KIF2BQ8N4N8 673 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 SH3GLB2Q9NR46 395 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 ATP6V0A2Q9Y487 856 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 CTDP1Q9Y5B0 961 aaPredicted RBP14.39□□□□□ -0.11
NFKB1-202ENST00000394820 PCDHA1Q9Y5I3 950 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 ANO9A1A5B4 782 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 H0Y3Z8 333 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 EXOC3O60645 756 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 EPB41P11171 864 aaKnown RBP14.39□□□□□ -0.11
NFKB1-202ENST00000394820 STAT1P42224 750 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 MRPL12P52815 198 aaKnown RBP14.39□□□□□ -0.11
NFKB1-202ENST00000394820 AMPD2Q01433 879 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 ALS2CLQ60I27 953 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 RPAINQ86UA6 219 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 ATP6V1G3Q96LB4 118 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 FAM118BQ9BPY3 351 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 VEZTQ9HBM0 779 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 SALL4Q9UJQ4 1053 aa14.39□□□□□ -0.11
NFKB1-202ENST00000394820 TTLL1O95922 423 aa14.38□□□□□ -0.11
NFKB1-202ENST00000394820 HSPA1LP34931 641 aa14.38□□□□□ -0.11
NFKB1-202ENST00000394820 CALCOCO2Q13137 446 aa14.38□□□□□ -0.11
NFKB1-202ENST00000394820 CERS5Q8N5B7 392 aa14.38□□□□□ -0.11
NFKB1-202ENST00000394820 CCDC63Q8NA47 563 aa14.38□□□□□ -0.11
NFKB1-202ENST00000394820 ZMYND12Q9H0C1 365 aa14.38□□□□□ -0.11
NFKB1-202ENST00000394820 ITIH6Q6UXX5 1313 aa14.38□□□□□ -0.11
NFKB1-202ENST00000394820 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.38□□□□□ -0.11
NFKB1-202ENST00000394820 PGRMC1O00264 195 aaKnown RBP14.38□□□□□ -0.11
NFKB1-202ENST00000394820 LMBR1Q8WVP7 490 aa14.38□□□□□ -0.11
NFKB1-202ENST00000394820 PPP1R1BQ9UD71 204 aaPredicted RBP14.38□□□□□ -0.11
NFKB1-202ENST00000394820 HDAC9Q9UKV0 1011 aa14.38□□□□□ -0.11
NFKB1-202ENST00000394820 CLRN2A0PK11 232 aa14.38□□□□□ -0.11
NFKB1-202ENST00000394820 MDH1P40925 334 aaKnown RBP14.38□□□□□ -0.11
NFKB1-202ENST00000394820 EAPPQ56P03 285 aaPredicted RBP14.38□□□□□ -0.11
NFKB1-202ENST00000394820 PAPD7Q5XG87 772 aaKnown RBP14.38□□□□□ -0.11
NFKB1-202ENST00000394820 HS2ST1Q7LGA3 356 aa14.38□□□□□ -0.11
NFKB1-202ENST00000394820 VSIG1Q86XK7 387 aa14.38□□□□□ -0.11
NFKB1-202ENST00000394820 DNAJC7Q99615 494 aa14.38□□□□□ -0.11
NFKB1-202ENST00000394820 GCNT4Q9P109 453 aa14.38□□□□□ -0.11
NFKB1-202ENST00000394820 A0A1W2PQC6 194 aa14.37□□□□□ -0.11
NFKB1-202ENST00000394820 GMNCA6NCL1 334 aa14.37□□□□□ -0.11
NFKB1-202ENST00000394820 SSTR3P32745 418 aaPredicted RBP14.37□□□□□ -0.11
NFKB1-202ENST00000394820 SEPT2Q15019 361 aa14.37□□□□□ -0.11
NFKB1-202ENST00000394820 CYP4F22Q6NT55 531 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms