RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 PCDHA1Q9Y5I3 950 aa18.27■□□□□ 0.52
SIPA1-201ENST00000394224 KIF1AQ12756 1690 aa18.27■□□□□ 0.51
SIPA1-201ENST00000394224 DNM1LO00429 736 aa18.27■□□□□ 0.51
SIPA1-201ENST00000394224 CAND2O75155 1236 aa18.27■□□□□ 0.51
SIPA1-201ENST00000394224 NMT1P30419 496 aaKnown RBP18.27■□□□□ 0.51
SIPA1-201ENST00000394224 NSMFQ6X4W1 530 aa18.27■□□□□ 0.51
SIPA1-201ENST00000394224 CCDC91Q7Z6B0 441 aa18.27■□□□□ 0.51
SIPA1-201ENST00000394224 SPIRE2Q8WWL2 714 aa18.27■□□□□ 0.51
SIPA1-201ENST00000394224 SLC24A3Q9HC58 644 aa18.27■□□□□ 0.51
SIPA1-201ENST00000394224 CEP72Q9P209 647 aa18.27■□□□□ 0.51
SIPA1-201ENST00000394224 SCAF8Q9UPN6 1271 aaKnown RBP18.27■□□□□ 0.51
SIPA1-201ENST00000394224 ECM29Q5VYK3 1845 aa18.26■□□□□ 0.51
SIPA1-201ENST00000394224 ZNF844Q08AG5 666 aa18.26■□□□□ 0.51
SIPA1-201ENST00000394224 SEPT14Q6ZU15 432 aa18.26■□□□□ 0.51
SIPA1-201ENST00000394224 TAB3Q8N5C8 712 aaPredicted RBP18.26■□□□□ 0.51
SIPA1-201ENST00000394224 HAS1Q92839 578 aa18.26■□□□□ 0.51
SIPA1-201ENST00000394224 SLC40A1Q9NP59 571 aa18.26■□□□□ 0.51
SIPA1-201ENST00000394224 TAS2R14Q9NYV8 317 aa18.26■□□□□ 0.51
SIPA1-201ENST00000394224 PPP1R11O60927 126 aaPredicted RBP18.26■□□□□ 0.51
SIPA1-201ENST00000394224 GDF11O95390 407 aa18.26■□□□□ 0.51
SIPA1-201ENST00000394224 KIF2BQ8N4N8 673 aa18.26■□□□□ 0.51
SIPA1-201ENST00000394224 RBM46Q8TBY0 533 aaKnown RBP18.26■□□□□ 0.51
SIPA1-201ENST00000394224 MTFR1LQ9H019 292 aa18.26■□□□□ 0.51
SIPA1-201ENST00000394224 AKAP3O75969 853 aa18.25■□□□□ 0.51
SIPA1-201ENST00000394224 NAA25Q14CX7 972 aa18.25■□□□□ 0.51
SIPA1-201ENST00000394224 TNIP1Q15025 636 aa18.25■□□□□ 0.51
SIPA1-201ENST00000394224 ZFYVE27Q5T4F4 411 aa18.25■□□□□ 0.51
SIPA1-201ENST00000394224 PALB2Q86YC2 1186 aa18.25■□□□□ 0.51
SIPA1-201ENST00000394224 GDAP1Q8TB36 358 aa18.25■□□□□ 0.51
SIPA1-201ENST00000394224 CTNNBL1Q8WYA6 563 aaPredicted RBP18.25■□□□□ 0.51
SIPA1-201ENST00000394224 RAPGEF5Q92565 580 aa18.25■□□□□ 0.51
SIPA1-201ENST00000394224 KCNK9Q9NPC2 374 aa18.25■□□□□ 0.51
SIPA1-201ENST00000394224 GMNCA6NCL1 334 aa18.25■□□□□ 0.51
SIPA1-201ENST00000394224 PLCG2P16885 1265 aa18.25■□□□□ 0.51
SIPA1-201ENST00000394224 IFI35P80217 286 aaPredicted RBP18.25■□□□□ 0.51
SIPA1-201ENST00000394224 MEI1Q5TIA1 1274 aa18.25■□□□□ 0.51
SIPA1-201ENST00000394224 MICALCLQ6ZW33 695 aa18.25■□□□□ 0.51
SIPA1-201ENST00000394224 PLCD4Q9BRC7 762 aa18.25■□□□□ 0.51
SIPA1-201ENST00000394224 CXorf56Q9H5V9 222 aa18.25■□□□□ 0.51
SIPA1-201ENST00000394224 L3MBTL1Q9Y468 752 aa18.25■□□□□ 0.51
SIPA1-201ENST00000394224 POLD1P28340 1107 aa18.25■□□□□ 0.51
SIPA1-201ENST00000394224 LRRC63Q05C16 580 aa18.25■□□□□ 0.51
SIPA1-201ENST00000394224 MYCT1Q8N699 235 aa18.25■□□□□ 0.51
SIPA1-201ENST00000394224 SH3GLB2Q9NR46 395 aa18.25■□□□□ 0.51
SIPA1-201ENST00000394224 NID2Q14112 1375 aa18.24■□□□□ 0.51
SIPA1-201ENST00000394224 A0A1W2PQJ5 194 aa18.24■□□□□ 0.51
SIPA1-201ENST00000394224 TISP43B9A030 160 aa18.24■□□□□ 0.51
SIPA1-201ENST00000394224 PGRMC1O00264 195 aaKnown RBP18.24■□□□□ 0.51
SIPA1-201ENST00000394224 ERFP50548 548 aa18.24■□□□□ 0.51
SIPA1-201ENST00000394224 ITGB3BPQ13352 177 aaPredicted RBP18.24■□□□□ 0.51
SIPA1-201ENST00000394224 INPP4AQ96PE3 977 aaPredicted RBP18.24■□□□□ 0.51
SIPA1-201ENST00000394224 POP1Q99575 1024 aaKnown RBP18.24■□□□□ 0.51
SIPA1-201ENST00000394224 NCAPGQ9BPX3 1015 aa18.24■□□□□ 0.51
SIPA1-201ENST00000394224 NAGPAQ9UK23 515 aa18.24■□□□□ 0.51
SIPA1-201ENST00000394224 PPP1R9AQ9ULJ8 1098 aa18.24■□□□□ 0.51
SIPA1-201ENST00000394224 ACSL3O95573 720 aa18.24■□□□□ 0.51
SIPA1-201ENST00000394224 H2AFZP0C0S5 128 aa18.24■□□□□ 0.51
SIPA1-201ENST00000394224 MESDQ14696 234 aa18.24■□□□□ 0.51
SIPA1-201ENST00000394224 H2AFVQ71UI9 128 aa18.24■□□□□ 0.51
SIPA1-201ENST00000394224 DNAJC19Q96DA6 116 aa18.24■□□□□ 0.51
SIPA1-201ENST00000394224 JMJD4Q9H9V9 463 aa18.24■□□□□ 0.51
SIPA1-201ENST00000394224 UTP11Q9Y3A2 253 aaKnown RBP18.24■□□□□ 0.51
SIPA1-201ENST00000394224 CACNA2D3Q8IZS8 1091 aa18.24■□□□□ 0.51
SIPA1-201ENST00000394224 SSR1P43307 286 aaKnown RBP18.23■□□□□ 0.51
SIPA1-201ENST00000394224 GALCP54803 685 aa18.23■□□□□ 0.51
SIPA1-201ENST00000394224 MSL1Q68DK7 614 aa18.23■□□□□ 0.51
SIPA1-201ENST00000394224 SEC16BQ96JE7 1060 aa18.23■□□□□ 0.51
SIPA1-201ENST00000394224 REEP2Q9BRK0 252 aa18.23■□□□□ 0.51
SIPA1-201ENST00000394224 AZI2Q9H6S1 392 aa18.23■□□□□ 0.51
SIPA1-201ENST00000394224 GDF3Q9NR23 364 aa18.23■□□□□ 0.51
SIPA1-201ENST00000394224 LEMD3Q9Y2U8 911 aa18.23■□□□□ 0.51
SIPA1-201ENST00000394224 THRAP3Q9Y2W1 955 aaKnown RBP18.23■□□□□ 0.51
SIPA1-201ENST00000394224 SORBS3O60504 671 aa18.23■□□□□ 0.51
SIPA1-201ENST00000394224 MARCKSL1P49006 195 aa18.23■□□□□ 0.51
SIPA1-201ENST00000394224 WDR66Q8TBY9 1149 aa18.23■□□□□ 0.51
SIPA1-201ENST00000394224 C18orf8Q96DM3 657 aa18.23■□□□□ 0.51
SIPA1-201ENST00000394224 OSBPL7Q9BZF2 842 aa18.23■□□□□ 0.51
SIPA1-201ENST00000394224 LAD1O00515 517 aa18.23■□□□□ 0.51
SIPA1-201ENST00000394224 FGRP09769 529 aa18.23■□□□□ 0.51
SIPA1-201ENST00000394224 NF2P35240 595 aa18.23■□□□□ 0.51
SIPA1-201ENST00000394224 PRPHP41219 470 aa18.23■□□□□ 0.51
SIPA1-201ENST00000394224 GPSM2P81274 684 aa18.23■□□□□ 0.51
SIPA1-201ENST00000394224 DAB2IPQ5VWQ8 1189 aa18.23■□□□□ 0.51
SIPA1-201ENST00000394224 MTMR9Q96QG7 549 aa18.23■□□□□ 0.51
SIPA1-201ENST00000394224 CUEDC2Q9H467 287 aa18.23■□□□□ 0.51
SIPA1-201ENST00000394224 ERVK-5Q9HDB9 667 aa18.23■□□□□ 0.51
SIPA1-201ENST00000394224 CTTNBP2NLQ9P2B4 639 aa18.23■□□□□ 0.51
SIPA1-201ENST00000394224 LAMB4A4D0S4 1761 aa18.22■□□□□ 0.51
SIPA1-201ENST00000394224 SPEF2Q9C093 1822 aa18.22■□□□□ 0.51
SIPA1-201ENST00000394224 TBCAO75347 108 aaKnown RBP18.22■□□□□ 0.51
SIPA1-201ENST00000394224 GBP2P32456 591 aaPredicted RBP18.22■□□□□ 0.51
SIPA1-201ENST00000394224 ASTE1Q2TB18 679 aaPredicted RBP18.22■□□□□ 0.51
SIPA1-201ENST00000394224 CUL5Q93034 780 aa18.22■□□□□ 0.51
SIPA1-201ENST00000394224 PWWP2AQ96N64 755 aa18.22■□□□□ 0.51
SIPA1-201ENST00000394224 CICQ96RK0 1608 aaPredicted RBP18.22■□□□□ 0.51
SIPA1-201ENST00000394224 EDIL3O43854 480 aa18.22■□□□□ 0.51
SIPA1-201ENST00000394224 ZNF804AQ7Z570 1209 aa18.22■□□□□ 0.51
SIPA1-201ENST00000394224 SYCP3Q8IZU3 236 aa18.22■□□□□ 0.51
SIPA1-201ENST00000394224 C8orf37Q96NL8 207 aa18.22■□□□□ 0.51
SIPA1-201ENST00000394224 PRMT1Q99873 361 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms