RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 FZD9O00144 591 aa4.21□□□□□ -1.74
PTPRC-205ENST00000391970 MT-CO1P00395 513 aa4.21□□□□□ -1.74
PTPRC-205ENST00000391970 ASGR2P07307 311 aa4.21□□□□□ -1.74
PTPRC-205ENST00000391970 MYBL2P10244 700 aa4.21□□□□□ -1.74
PTPRC-205ENST00000391970 MC4RP32245 332 aa4.21□□□□□ -1.74
PTPRC-205ENST00000391970 NFE2Q16621 373 aaPredicted RBP4.21□□□□□ -1.74
PTPRC-205ENST00000391970 CR1LQ2VPA4 569 aa4.21□□□□□ -1.74
PTPRC-205ENST00000391970 ZNF605Q86T29 641 aa4.21□□□□□ -1.74
PTPRC-205ENST00000391970 NBPF11Q86T75 865 aa4.21□□□□□ -1.74
PTPRC-205ENST00000391970 PROSER1Q86XN7 944 aa4.21□□□□□ -1.74
PTPRC-205ENST00000391970 CMIPQ8IY22 773 aa4.21□□□□□ -1.74
PTPRC-205ENST00000391970 C7orf31Q8N865 590 aa4.21□□□□□ -1.74
PTPRC-205ENST00000391970 HIPK4Q8NE63 616 aa4.21□□□□□ -1.74
PTPRC-205ENST00000391970 LMBR1Q8WVP7 490 aa4.21□□□□□ -1.74
PTPRC-205ENST00000391970 FAM168AQ92567 244 aa4.21□□□□□ -1.74
PTPRC-205ENST00000391970 LIN37Q96GY3 246 aaPredicted RBP4.21□□□□□ -1.74
PTPRC-205ENST00000391970 ZNF496Q96IT1 587 aaPredicted RBP4.21□□□□□ -1.74
PTPRC-205ENST00000391970 RNF38Q9H0F5 515 aa4.21□□□□□ -1.74
PTPRC-205ENST00000391970 NGRNQ9NPE2 291 aaKnown RBP4.21□□□□□ -1.74
PTPRC-205ENST00000391970 TCEAL9Q9UHQ7 104 aa4.21□□□□□ -1.74
PTPRC-205ENST00000391970 IRS2Q9Y4H2 1338 aa4.21□□□□□ -1.74
PTPRC-205ENST00000391970 UBA6A0AVT1 1052 aaPredicted RBP4.2□□□□□ -1.74
PTPRC-205ENST00000391970 PRAMEF22A3QJZ6 481 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 TRIM75PA6NK02 468 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 ZNF839A8K0R7 811 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 AKAP10O43572 662 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 MPIG6BO95866 241 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 PRLP01236 227 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 C8BP07358 591 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 NCAM1P13591 858 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 JUNBP17275 347 aaPredicted RBP4.2□□□□□ -1.74
PTPRC-205ENST00000391970 PTGS1P23219 599 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 GPR3P46089 330 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 RAB27AP51159 221 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 SCAND1P57086 179 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 NKX3-2P78367 333 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 KRT85P78386 507 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 PIN1Q13526 163 aaPredicted RBP4.2□□□□□ -1.74
PTPRC-205ENST00000391970 MOGSQ13724 837 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 PTPN21Q16825 1174 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 TTC38Q5R3I4 469 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 PRAMEF18Q5VWM3 479 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 MPZL3Q6UWV2 235 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 ESPNLQ6ZVH7 1005 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 ZC3H18Q86VM9 953 aaKnown RBP4.2□□□□□ -1.74
PTPRC-205ENST00000391970 CXorf67Q86X51 503 aaPredicted RBP4.2□□□□□ -1.74
PTPRC-205ENST00000391970 PHYKPLQ8IUZ5 450 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 FMNL3Q8IVF7 1028 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 FAM26EQ8N5C1 309 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 C1orf162Q8NEQ5 155 aaPredicted RBP4.2□□□□□ -1.74
PTPRC-205ENST00000391970 ERCC4Q92889 916 aaPredicted RBP4.2□□□□□ -1.74
PTPRC-205ENST00000391970 E2F7Q96AV8 911 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 HOOK2Q96ED9 719 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 DDX11Q96FC9 970 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 FUBP3Q96I24 572 aaKnown RBP eCLIP4.2□□□□□ -1.74
PTPRC-205ENST00000391970 MAML3Q96JK9 1138 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 ACAP3Q96P50 834 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 ORAI2Q96SN7 254 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 FOXB1Q99853 325 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 SLC13A1Q9BZW2 595 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 SEMA4AQ9H3S1 761 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 ARHGAP28Q9P2N2 729 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 RBPJLQ9UBG7 517 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 WASF3Q9UPY6 502 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 CARMIL2Q6F5E8 1435 aa4.2□□□□□ -1.74
PTPRC-205ENST00000391970 MYOCOSA0A1B0GUC4 107 aa4.19□□□□□ -1.74
PTPRC-205ENST00000391970 E2F8A0AVK6 867 aa4.19□□□□□ -1.74
PTPRC-205ENST00000391970 GOLGA8AA7E2F4 631 aa4.19□□□□□ -1.74
PTPRC-205ENST00000391970 GOLGA8BA8MQT2 603 aa4.19□□□□□ -1.74
PTPRC-205ENST00000391970 PEX10O60683 326 aa4.19□□□□□ -1.74
PTPRC-205ENST00000391970 H2AFYO75367 372 aaKnown RBP4.19□□□□□ -1.74
PTPRC-205ENST00000391970 ABLIM3O94929 683 aa4.19□□□□□ -1.74
PTPRC-205ENST00000391970 CFBP00751 764 aa4.19□□□□□ -1.74
PTPRC-205ENST00000391970 ENO2P09104 434 aaPredicted RBP4.19□□□□□ -1.74
PTPRC-205ENST00000391970 RBP3P10745 1247 aa4.19□□□□□ -1.74
PTPRC-205ENST00000391970 MANFP55145 182 aaKnown RBP4.19□□□□□ -1.74
PTPRC-205ENST00000391970 SRSF3P84103 164 aaKnown RBP4.19□□□□□ -1.74
PTPRC-205ENST00000391970 ALDH6A1Q02252 535 aaKnown RBP4.19□□□□□ -1.74
PTPRC-205ENST00000391970 CACNB2Q08289 660 aaPredicted RBP4.19□□□□□ -1.74
PTPRC-205ENST00000391970 MYBPC3Q14896 1274 aa4.19□□□□□ -1.74
PTPRC-205ENST00000391970 FSCN1Q16658 493 aaKnown RBP4.19□□□□□ -1.74
PTPRC-205ENST00000391970 ZBTB41Q5SVQ8 909 aa4.19□□□□□ -1.74
PTPRC-205ENST00000391970 VASNQ6EMK4 673 aa4.19□□□□□ -1.74
PTPRC-205ENST00000391970 CD300LDQ6UXZ3 194 aa4.19□□□□□ -1.74
PTPRC-205ENST00000391970 LIPIQ6XZB0 460 aa4.19□□□□□ -1.74
PTPRC-205ENST00000391970 FAXDC2Q96IV6 333 aa4.19□□□□□ -1.74
PTPRC-205ENST00000391970 RTFDC1Q9BY42 306 aaPredicted RBP4.19□□□□□ -1.74
PTPRC-205ENST00000391970 CDH19Q9H159 772 aa4.19□□□□□ -1.74
PTPRC-205ENST00000391970 EPB41L4BQ9H329 900 aa4.19□□□□□ -1.74
PTPRC-205ENST00000391970 POFUT1Q9H488 388 aa4.19□□□□□ -1.74
PTPRC-205ENST00000391970 CNTD2Q9H8S5 307 aa4.19□□□□□ -1.74
PTPRC-205ENST00000391970 SLC39A2Q9NP94 309 aa4.19□□□□□ -1.74
PTPRC-205ENST00000391970 AASDHPPTQ9NRN7 309 aa4.19□□□□□ -1.74
PTPRC-205ENST00000391970 CCM2LQ9NUG4 571 aaPredicted RBP4.19□□□□□ -1.74
PTPRC-205ENST00000391970 UCKL1Q9NWZ5 548 aa4.19□□□□□ -1.74
PTPRC-205ENST00000391970 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.19□□□□□ -1.74
PTPRC-205ENST00000391970 ZIM2Q9NZV7 527 aa4.19□□□□□ -1.74
PTPRC-205ENST00000391970 MBD1Q9UIS9 605 aaPredicted RBP4.19□□□□□ -1.74
PTPRC-205ENST00000391970 PCDHA5Q9Y5H7 936 aa4.19□□□□□ -1.74
PTPRC-205ENST00000391970 PPP2R3BQ9Y5P8 575 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms