RNA–Protein interactions for RNA: ENST00000389797.7

LRCH1-202, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRCH1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-202ENST00000389797 FAM163AQ96GL9 167 aaPredicted RBP16.89■□□□□ 0.29
LRCH1-202ENST00000389797 NT5C3AQ9H0P0 336 aa16.89■□□□□ 0.29
LRCH1-202ENST00000389797 ADAMTSL1Q8N6G6 1762 aa16.89■□□□□ 0.29
LRCH1-202ENST00000389797 MYO1FO00160 1098 aa16.88■□□□□ 0.29
LRCH1-202ENST00000389797 CEP104O60308 925 aa16.88■□□□□ 0.29
LRCH1-202ENST00000389797 ECM1Q16610 540 aa16.88■□□□□ 0.29
LRCH1-202ENST00000389797 MSL1Q68DK7 614 aa16.88■□□□□ 0.29
LRCH1-202ENST00000389797 SNED1Q8TER0 1413 aa16.88■□□□□ 0.29
LRCH1-202ENST00000389797 ZNF646O15015 1829 aaPredicted RBP16.88■□□□□ 0.29
LRCH1-202ENST00000389797 HSD17B3P37058 310 aa16.88■□□□□ 0.29
LRCH1-202ENST00000389797 HDLBPQ00341 1268 aaKnown RBP16.88■□□□□ 0.29
LRCH1-202ENST00000389797 HERC4Q5GLZ8 1057 aaPredicted RBP16.88■□□□□ 0.29
LRCH1-202ENST00000389797 RUFY4Q6ZNE9 571 aa16.88■□□□□ 0.29
LRCH1-202ENST00000389797 TEX11Q8IYF3 940 aa16.88■□□□□ 0.29
LRCH1-202ENST00000389797 MYCBPQ99417 103 aaPredicted RBP16.88■□□□□ 0.29
LRCH1-202ENST00000389797 DDX25Q9UHL0 483 aaKnown RBP16.88■□□□□ 0.29
LRCH1-202ENST00000389797 FRMPD2Q68DX3 1309 aaPredicted RBP16.88■□□□□ 0.29
LRCH1-202ENST00000389797 IFT88Q13099 833 aa16.88■□□□□ 0.29
LRCH1-202ENST00000389797 ADAM9Q13443 819 aa16.88■□□□□ 0.29
LRCH1-202ENST00000389797 SCFD2Q8WU76 684 aa16.88■□□□□ 0.29
LRCH1-202ENST00000389797 SPAG5Q96R06 1193 aa16.88■□□□□ 0.29
LRCH1-202ENST00000389797 GANQ9H2C0 597 aa16.88■□□□□ 0.29
LRCH1-202ENST00000389797 PPANQ9NQ55 473 aaKnown RBP16.88■□□□□ 0.29
LRCH1-202ENST00000389797 PCDHA12Q9UN75 941 aa16.88■□□□□ 0.29
LRCH1-202ENST00000389797 BZW2Q9Y6E2 419 aaKnown RBP16.88■□□□□ 0.29
LRCH1-202ENST00000389797 KDM3AQ9Y4C1 1321 aa16.87■□□□□ 0.29
LRCH1-202ENST00000389797 CETN3O15182 167 aa16.87■□□□□ 0.29
LRCH1-202ENST00000389797 PDHBP11177 359 aa16.87■□□□□ 0.29
LRCH1-202ENST00000389797 KCNH2Q12809 1159 aa16.87■□□□□ 0.29
LRCH1-202ENST00000389797 FLAD1Q8NFF5 587 aa16.87■□□□□ 0.29
LRCH1-202ENST00000389797 ACTRT1Q8TDG2 376 aa16.87■□□□□ 0.29
LRCH1-202ENST00000389797 CALR3Q96L12 384 aaKnown RBP16.87■□□□□ 0.29
LRCH1-202ENST00000389797 CTNNA1P35221 906 aaKnown RBP16.87■□□□□ 0.29
LRCH1-202ENST00000389797 EMILIN3Q9NT22 766 aa16.87■□□□□ 0.29
LRCH1-202ENST00000389797 PGRMC1O00264 195 aaKnown RBP16.86■□□□□ 0.29
LRCH1-202ENST00000389797 RIMBP2O15034 1052 aa16.86■□□□□ 0.29
LRCH1-202ENST00000389797 PTK2Q05397 1052 aa16.86■□□□□ 0.29
LRCH1-202ENST00000389797 BIRC3Q13489 604 aa16.86■□□□□ 0.29
LRCH1-202ENST00000389797 ASPRV1Q53RT3 343 aa16.86■□□□□ 0.29
LRCH1-202ENST00000389797 CERS5Q8N5B7 392 aa16.86■□□□□ 0.29
LRCH1-202ENST00000389797 FGFBP2Q9BYJ0 223 aa16.86■□□□□ 0.29
LRCH1-202ENST00000389797 SLX4Q8IY92 1834 aa16.86■□□□□ 0.29
LRCH1-202ENST00000389797 SART1O43290 800 aaKnown RBP16.86■□□□□ 0.29
LRCH1-202ENST00000389797 PPP4R3CPQ6ZMV5 832 aa16.86■□□□□ 0.29
LRCH1-202ENST00000389797 GTF2IP78347 998 aa16.86■□□□□ 0.29
LRCH1-202ENST00000389797 SCFD1Q8WVM8 642 aa16.86■□□□□ 0.29
LRCH1-202ENST00000389797 HAS1Q92839 578 aa16.86■□□□□ 0.29
LRCH1-202ENST00000389797 PLCG2P16885 1265 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 DRP2Q13474 957 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 MTMR3Q13615 1198 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 EDRF1Q3B7T1 1238 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 ODF2Q5BJF6 829 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 GPBP1Q86WP2 473 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 C3orf20Q8ND61 904 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 TBC1D22AQ8WUA7 517 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 CYFIP2Q96F07 1278 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 COA1Q9GZY4 146 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 KCTD10Q9H3F6 313 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 KIAA1024Q9UPX6 916 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 GMNCA6NCL1 334 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 TMCO5BA8MYB1 307 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 E9PMD0 336 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 CCDC188H7C350 402 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 KRT18P05783 430 aaKnown RBP16.85■□□□□ 0.29
LRCH1-202ENST00000389797 PLA2G4BP0C869 781 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 ECHS1P30084 290 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 PDE6BP35913 854 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 ACTN3Q08043 901 aaPredicted RBP16.85■□□□□ 0.29
LRCH1-202ENST00000389797 UBE2SQ16763 222 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 HYIQ5T013 277 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 ALKBH5Q6P6C2 394 aaKnown RBP16.85■□□□□ 0.29
LRCH1-202ENST00000389797 ZNF571Q7Z3V5 609 aaPredicted RBP16.85■□□□□ 0.29
LRCH1-202ENST00000389797 IRF2BP2Q7Z5L9 587 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.85■□□□□ 0.299e-7■■■■□ 24.4
LRCH1-202ENST00000389797 AP1M1Q9BXS5 423 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 VCPKMTQ9H867 229 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 PCDHA2Q9Y5H9 948 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 H0YGN5 161 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 GCFC2P16383 781 aaKnown RBP16.85■□□□□ 0.29
LRCH1-202ENST00000389797 NOVP48745 357 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 PLCB4Q15147 1175 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 CCDC121Q6ZUS5 278 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 DDX42Q86XP3 938 aaKnown RBP eCLIP16.85■□□□□ 0.29
LRCH1-202ENST00000389797 OR2W6PQ8NHA6 318 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 LMBR1Q8WVP7 490 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 GOLPH3Q9H4A6 298 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 ZHX3Q9H4I2 956 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 NAGPAQ9UK23 515 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 HDAC9Q9UKV0 1011 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 DAGLAQ9Y4D2 1042 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 NFS1Q9Y697 457 aa16.85■□□□□ 0.29
LRCH1-202ENST00000389797 NR2F2P24468 414 aa16.84■□□□□ 0.29
LRCH1-202ENST00000389797 MRPL12P52815 198 aaKnown RBP16.84■□□□□ 0.29
LRCH1-202ENST00000389797 ZNF844Q08AG5 666 aa16.84■□□□□ 0.29
LRCH1-202ENST00000389797 UAP1Q16222 522 aaPredicted RBP16.84■□□□□ 0.29
LRCH1-202ENST00000389797 PPP1R18Q6NYC8 613 aa16.84■□□□□ 0.29
LRCH1-202ENST00000389797 UBLCP1Q8WVY7 318 aaPredicted RBP16.84■□□□□ 0.29
LRCH1-202ENST00000389797 MASTLQ96GX5 879 aa16.84■□□□□ 0.29
LRCH1-202ENST00000389797 GPCPD1Q9NPB8 672 aa16.84■□□□□ 0.29
LRCH1-202ENST00000389797 SCN9AQ15858 1988 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms