RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 CCDC94Q9BW85 323 aaPredicted RBP14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 RPF1Q9H9Y2 349 aaKnown RBP14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 PRDM10Q9NQV6 1147 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 E7EVH7 732 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 CYP2B6P20813 491 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 SMARCA1P28370 1054 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 ZBED6P86452 979 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 ARID5BQ14865 1188 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 CFAP58Q5T655 872 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 SCARA5Q6ZMJ2 495 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 PPP1R14CQ8TAE6 165 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 UBLCP1Q8WVY7 318 aaPredicted RBP14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 EHD4Q9H223 541 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.26□□□□□ -0.132e-6■■■□□ 15.1
PTPRN2-202ENST00000389416 THAP12O43422 761 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 CSPG5O95196 566 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 TUBBP07437 444 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 POLR2BP30876 1174 aaKnown RBP14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 GCLMP48507 274 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 KNOP1Q1ED39 458 aaKnown RBP14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 CERS5Q8N5B7 392 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 FAM163AQ96GL9 167 aaPredicted RBP14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 MTRQ99707 1265 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 IL17RBQ9NRM6 502 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 TTLL3Q9Y4R7 772 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 NPHP3-ACAD11A0A0J9YXS1 232 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 IFNB1P01574 187 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 EHHADHQ08426 723 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 TUBB2AQ13885 445 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 SLFN12LQ6IEE8 588 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 TUBB2BQ9BVA1 445 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 BZW2Q9Y6E2 419 aaKnown RBP14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 MON2Q7Z3U7 1717 aa14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 SHPRHQ149N8 1683 aa14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 ACTN4O43707 911 aaKnown RBP14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 BACE1P56817 501 aa14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 MESDQ14696 234 aa14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 SPDYE2Q495Y8 402 aa14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 MB21D1Q8N884 522 aa14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 ACRBPQ8NEB7 543 aa14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 FAM149B1Q96BN6 582 aa14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 TSNARE1Q96NA8 513 aa14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 FAM213AQ9BRX8 229 aa14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 SPTLC3Q9NUV7 552 aa14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 NRXN3Q9Y4C0 1643 aa14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 SYNJ2BP-COX16A0A087WUM0 186 aa14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 SOWAHDA6NJG2 315 aa14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 ABCD1P33897 745 aa14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 LLGL1Q15334 1064 aa14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 LONRF2Q1L5Z9 754 aa14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 FAM83AQ86UY5 434 aa14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 KRT222Q8N1A0 295 aa14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 TAAR1Q96RJ0 339 aa14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 COX16Q9P0S2 106 aa14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 TXNDC16Q9P2K2 825 aa14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 TSKSQ9UJT2 592 aa14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 TMX2Q9Y320 296 aa14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 PCDHAC2Q9Y5I4 1007 aa14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 HIP1RO75146 1068 aa14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 EYA4O95677 639 aa14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 NMT1P30419 496 aaKnown RBP14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 EIF4A3P38919 411 aaKnown RBP14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 ADAMTS1Q9UHI8 967 aa14.25□□□□□ -0.13
PTPRN2-202ENST00000389416 ENC1O14682 589 aa14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 CDC25BP30305 580 aa14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 YWHABP31946 246 aaKnown RBP14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 GUF1Q8N442 669 aaKnown RBP14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 MRRFQ96E11 262 aaKnown RBP14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 POLR3FQ9H1D9 316 aaPredicted RBP14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 STIM2Q9P246 746 aa14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 UTP11Q9Y3A2 253 aaKnown RBP14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 GOLGA6L7A0A1B0GV03 622 aa14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 ESYT2A0FGR8 921 aa14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 MYO1FO00160 1098 aa14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 DYNC1LI2O43237 492 aaPredicted RBP14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 SLURP2P0DP57 97 aa14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 ZNF568Q3ZCX4 644 aa14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 ZNF394Q53GI3 561 aa14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 INTS8Q75QN2 995 aaKnown RBP14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 ERO1BQ86YB8 467 aa14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 PARK7Q99497 189 aaKnown RBP14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 FZD1Q9UP38 647 aa14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 GOLGA8SH3BPF8 625 aa14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 OPA1O60313 960 aa14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 HAUS6Q7Z4H7 955 aa14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 PHLDB2Q86SQ0 1253 aa14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 SAAL1Q96ER3 474 aa14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 LRFN2Q9ULH4 789 aa14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 KNDC1Q76NI1 1749 aa14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 CETPP11597 493 aa14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 NAA35Q5VZE5 725 aa14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 TWF2Q6IBS0 349 aaKnown RBP14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 GDAP1L1Q96MZ0 367 aa14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 RGPD8O14715 1765 aaPredicted RBP14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 RIC1Q4ADV7 1423 aa14.24□□□□□ -0.13
PTPRN2-202ENST00000389416 PHKA2P46019 1235 aa14.23□□□□□ -0.13
PTPRN2-202ENST00000389416 VPS41P49754 854 aa14.23□□□□□ -0.13
PTPRN2-202ENST00000389416 KCNH2Q12809 1159 aa14.23□□□□□ -0.13
PTPRN2-202ENST00000389416 ZNF653Q96CK0 615 aa14.23□□□□□ -0.13
PTPRN2-202ENST00000389416 HINFPQ9BQA5 517 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms