RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 CELF3Q5SZQ8 465 aaKnown RBP11.06□□□□□ -0.64
C9orf85-202ENST00000377027 LRRC8DQ7L1W4 858 aa11.06□□□□□ -0.64
C9orf85-202ENST00000377027 HOMER1Q86YM7 354 aa11.06□□□□□ -0.64
C9orf85-202ENST00000377027 CRIPAKQ8N1N5 446 aa11.06□□□□□ -0.64
C9orf85-202ENST00000377027 CAGE1Q8TC20 777 aa11.06□□□□□ -0.64
C9orf85-202ENST00000377027 IGDCC4Q8TDY8 1250 aa11.06□□□□□ -0.64
C9orf85-202ENST00000377027 ATXN2LQ8WWM7 1075 aaKnown RBP11.06□□□□□ -0.64
C9orf85-202ENST00000377027 NECAB3Q96P71 396 aaPredicted RBP11.06□□□□□ -0.64
C9orf85-202ENST00000377027 KCTD15Q96SI1 283 aaPredicted RBP11.06□□□□□ -0.64
C9orf85-202ENST00000377027 B4DLN1 442 aa11.05□□□□□ -0.64
C9orf85-202ENST00000377027 GGPS1O95749 300 aa11.05□□□□□ -0.64
C9orf85-202ENST00000377027 MYCLP12524 364 aaPredicted RBP11.05□□□□□ -0.64
C9orf85-202ENST00000377027 SELPP16109 830 aa11.05□□□□□ -0.64
C9orf85-202ENST00000377027 CASTP20810 708 aaKnown RBP11.05□□□□□ -0.64
C9orf85-202ENST00000377027 FSHRP23945 695 aa11.05□□□□□ -0.64
C9orf85-202ENST00000377027 SMCPP49901 116 aaPredicted RBP11.05□□□□□ -0.64
C9orf85-202ENST00000377027 KCNQ1P51787 676 aa11.05□□□□□ -0.64
C9orf85-202ENST00000377027 MRPL12P52815 198 aaKnown RBP11.05□□□□□ -0.64
C9orf85-202ENST00000377027 CTC1Q2NKJ3 1217 aa11.05□□□□□ -0.64
C9orf85-202ENST00000377027 ZNF618Q5T7W0 954 aa11.05□□□□□ -0.64
C9orf85-202ENST00000377027 MICALL1Q8N3F8 863 aa11.05□□□□□ -0.64
C9orf85-202ENST00000377027 PHOSPHO2Q8TCD6 241 aa11.05□□□□□ -0.64
C9orf85-202ENST00000377027 ADAMTS19Q8TE59 1207 aa11.05□□□□□ -0.64
C9orf85-202ENST00000377027 MYL10Q9BUA6 226 aa11.05□□□□□ -0.64
C9orf85-202ENST00000377027 FTOQ9C0B1 505 aaKnown RBP eCLIP11.05□□□□□ -0.64
C9orf85-202ENST00000377027 TRIOO75962 3097 aa11.05□□□□□ -0.64
C9orf85-202ENST00000377027 LOXHD1Q8IVV2 1947 aa11.04□□□□□ -0.64
C9orf85-202ENST00000377027 IFIT3O14879 490 aaKnown RBP11.04□□□□□ -0.64
C9orf85-202ENST00000377027 BAIAP3O94812 1187 aa11.04□□□□□ -0.64
C9orf85-202ENST00000377027 ACTN1P12814 892 aa11.04□□□□□ -0.64
C9orf85-202ENST00000377027 BMP1P13497 986 aa11.04□□□□□ -0.64
C9orf85-202ENST00000377027 PTK7Q13308 1070 aa11.04□□□□□ -0.64
C9orf85-202ENST00000377027 GRB10Q13322 594 aa11.04□□□□□ -0.64
C9orf85-202ENST00000377027 LAMC2Q13753 1193 aa11.04□□□□□ -0.64
C9orf85-202ENST00000377027 SKAP1Q86WV1 359 aa11.04□□□□□ -0.64
C9orf85-202ENST00000377027 DHX37Q8IY37 1157 aaKnown RBP11.04□□□□□ -0.64
C9orf85-202ENST00000377027 RETREG2Q8NC44 543 aa11.04□□□□□ -0.64
C9orf85-202ENST00000377027 MAP4K1Q92918 833 aa11.04□□□□□ -0.64
C9orf85-202ENST00000377027 LY9Q9HBG7 655 aa11.04□□□□□ -0.64
C9orf85-202ENST00000377027 AAASQ9NRG9 546 aa11.04□□□□□ -0.64
C9orf85-202ENST00000377027 NOD1Q9Y239 953 aa11.04□□□□□ -0.64
C9orf85-202ENST00000377027 PCDHB9Q9Y5E1 797 aa11.04□□□□□ -0.64
C9orf85-202ENST00000377027 KIAA1671Q9BY89 1806 aa11.03□□□□□ -0.64
C9orf85-202ENST00000377027 PNMA6FA0A0J9YX94 578 aa11.03□□□□□ -0.64
C9orf85-202ENST00000377027 MEIS2O14770 477 aa11.03□□□□□ -0.64
C9orf85-202ENST00000377027 ST8SIA5O15466 376 aa11.03□□□□□ -0.64
C9orf85-202ENST00000377027 PLEKHA8P1O95397 391 aa11.03□□□□□ -0.64
C9orf85-202ENST00000377027 LGALS2P05162 132 aa11.03□□□□□ -0.64
C9orf85-202ENST00000377027 MRPS5P82675 430 aaKnown RBP11.03□□□□□ -0.64
C9orf85-202ENST00000377027 WTAPQ15007 396 aa11.03□□□□□ -0.64
C9orf85-202ENST00000377027 CNKSR3Q6P9H4 555 aa11.03□□□□□ -0.64
C9orf85-202ENST00000377027 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.03□□□□□ -0.64
C9orf85-202ENST00000377027 SERINC5Q86VE9 423 aa11.03□□□□□ -0.64
C9orf85-202ENST00000377027 FCHSD1Q86WN1 690 aa11.03□□□□□ -0.64
C9orf85-202ENST00000377027 TRIM50Q86XT4 487 aa11.03□□□□□ -0.64
C9orf85-202ENST00000377027 C7orf31Q8N865 590 aa11.03□□□□□ -0.64
C9orf85-202ENST00000377027 GDPD5Q8WTR4 605 aa11.03□□□□□ -0.64
C9orf85-202ENST00000377027 PIBF1Q8WXW3 757 aa11.03□□□□□ -0.64
C9orf85-202ENST00000377027 ARNTL2Q8WYA1 636 aa11.03□□□□□ -0.64
C9orf85-202ENST00000377027 SPATA33Q96N06 139 aa11.03□□□□□ -0.64
C9orf85-202ENST00000377027 INPP4AQ96PE3 977 aaPredicted RBP11.03□□□□□ -0.64
C9orf85-202ENST00000377027 KLF16Q9BXK1 252 aaPredicted RBP11.03□□□□□ -0.64
C9orf85-202ENST00000377027 LSG1Q9H089 658 aaKnown RBP11.03□□□□□ -0.64
C9orf85-202ENST00000377027 MAP3K20Q9NYL2 800 aaKnown RBP11.03□□□□□ -0.64
C9orf85-202ENST00000377027 RAPGEFL1Q9UHV5 662 aa11.03□□□□□ -0.64
C9orf85-202ENST00000377027 RBM8AQ9Y5S9 174 aaKnown RBP11.03□□□□□ -0.64
C9orf85-202ENST00000377027 RALGAPA2Q2PPJ7 1873 aa11.03□□□□□ -0.64
C9orf85-202ENST00000377027 LINC01553A4QN01 128 aa11.02□□□□□ -0.65
C9orf85-202ENST00000377027 GCOM1H8Y6P7 765 aaPredicted RBP11.02□□□□□ -0.65
C9orf85-202ENST00000377027 AXIN1O15169 862 aa11.02□□□□□ -0.65
C9orf85-202ENST00000377027 PPFIA4O75335 1185 aa11.02□□□□□ -0.65
C9orf85-202ENST00000377027 GJB5O95377 273 aa11.02□□□□□ -0.65
C9orf85-202ENST00000377027 POLR2MP0CAP2 368 aa11.02□□□□□ -0.65
C9orf85-202ENST00000377027 CCND2P30279 289 aa11.02□□□□□ -0.65
C9orf85-202ENST00000377027 ICAM3P32942 547 aa11.02□□□□□ -0.65
C9orf85-202ENST00000377027 MCCD1P59942 119 aaPredicted RBP11.02□□□□□ -0.65
C9orf85-202ENST00000377027 ADAM17P78536 824 aa11.02□□□□□ -0.65
C9orf85-202ENST00000377027 USP17L6PQ6QN14 398 aa11.02□□□□□ -0.65
C9orf85-202ENST00000377027 CMTR1Q8N1G2 835 aaKnown RBP11.02□□□□□ -0.65
C9orf85-202ENST00000377027 NCOA7Q8NI08 942 aa11.02□□□□□ -0.65
C9orf85-202ENST00000377027 KATNAL1Q9BW62 490 aa11.02□□□□□ -0.65
C9orf85-202ENST00000377027 KAT6AQ92794 2004 aa11.02□□□□□ -0.65
C9orf85-202ENST00000377027 WDFY4Q6ZS81 3184 aa11.02□□□□□ -0.65
C9orf85-202ENST00000377027 SPATA31C2B4DYI2 1134 aa11.01□□□□□ -0.65
C9orf85-202ENST00000377027 SH2B2O14492 632 aaPredicted RBP11.01□□□□□ -0.65
C9orf85-202ENST00000377027 TREHO43280 583 aa11.01□□□□□ -0.65
C9orf85-202ENST00000377027 LGR5O75473 907 aa11.01□□□□□ -0.65
C9orf85-202ENST00000377027 SMIM10L2AP0DMW4 78 aa11.01□□□□□ -0.65
C9orf85-202ENST00000377027 SMIM10L2BP0DMW5 78 aa11.01□□□□□ -0.65
C9orf85-202ENST00000377027 RXRAP19793 462 aa11.01□□□□□ -0.65
C9orf85-202ENST00000377027 VAC14Q08AM6 782 aa11.01□□□□□ -0.65
C9orf85-202ENST00000377027 CYFIP1Q7L576 1253 aa11.01□□□□□ -0.65
C9orf85-202ENST00000377027 RAB11FIP4Q86YS3 637 aa11.01□□□□□ -0.65
C9orf85-202ENST00000377027 ZNF654Q8IZM8 581 aa11.01□□□□□ -0.65
C9orf85-202ENST00000377027 SRBD1Q8N5C6 995 aaKnown RBP11.01□□□□□ -0.65
C9orf85-202ENST00000377027 SAMD3Q8N6K7 520 aa11.01□□□□□ -0.65
C9orf85-202ENST00000377027 CCDC155Q8N6L0 562 aa11.01□□□□□ -0.65
C9orf85-202ENST00000377027 DBF4BQ8NFT6 615 aa11.01□□□□□ -0.65
C9orf85-202ENST00000377027 UHRF1Q96T88 793 aaPredicted RBP11.01□□□□□ -0.65
C9orf85-202ENST00000377027 GPR20Q99678 358 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms