RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 TULP1O00294 542 aaPredicted RBP17.59■□□□□ 0.41
CNKSR1-202ENST00000374253 IPO5O00410 1097 aaKnown RBP17.59■□□□□ 0.41
CNKSR1-202ENST00000374253 TBC1D12O60347 775 aa17.59■□□□□ 0.41
CNKSR1-202ENST00000374253 SFMBT2Q5VUG0 894 aa17.59■□□□□ 0.41
CNKSR1-202ENST00000374253 FAM160B2Q86V87 743 aa17.59■□□□□ 0.41
CNKSR1-202ENST00000374253 SMAP1Q8IYB5 467 aaPredicted RBP17.59■□□□□ 0.41
CNKSR1-202ENST00000374253 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.59■□□□□ 0.41
CNKSR1-202ENST00000374253 SH2D4AQ9H788 454 aa17.59■□□□□ 0.41
CNKSR1-202ENST00000374253 ARFGAP3Q9NP61 516 aa17.59■□□□□ 0.41
CNKSR1-202ENST00000374253 ARMCX3Q9UH62 379 aaPredicted RBP17.59■□□□□ 0.41
CNKSR1-202ENST00000374253 NCK2O43639 380 aa17.58■□□□□ 0.41
CNKSR1-202ENST00000374253 GNA14O95837 355 aa17.58■□□□□ 0.41
CNKSR1-202ENST00000374253 NR3C1P04150 777 aa17.58■□□□□ 0.41
CNKSR1-202ENST00000374253 CXCR5P32302 372 aa17.58■□□□□ 0.41
CNKSR1-202ENST00000374253 DNA2P51530 1060 aa17.58■□□□□ 0.41
CNKSR1-202ENST00000374253 VSNL1P62760 191 aa17.58■□□□□ 0.41
CNKSR1-202ENST00000374253 EDRF1Q3B7T1 1238 aa17.58■□□□□ 0.41
CNKSR1-202ENST00000374253 MUM1L1Q5H9M0 696 aa17.58■□□□□ 0.41
CNKSR1-202ENST00000374253 ZBED3Q96IU2 234 aaPredicted RBP17.58■□□□□ 0.41
CNKSR1-202ENST00000374253 LXNQ9BS40 222 aa17.58■□□□□ 0.41
CNKSR1-202ENST00000374253 CEP72Q9P209 647 aa17.58■□□□□ 0.41
CNKSR1-202ENST00000374253 PDE2AO00408 941 aaPredicted RBP17.58■□□□□ 0.4
CNKSR1-202ENST00000374253 PTGER2P43116 358 aa17.58■□□□□ 0.4
CNKSR1-202ENST00000374253 NAP1L1P55209 391 aaKnown RBP17.58■□□□□ 0.4
CNKSR1-202ENST00000374253 PPP2R5CQ13362 524 aa17.58■□□□□ 0.4
CNKSR1-202ENST00000374253 FKBP1CQ5VVH2 108 aa17.58■□□□□ 0.4
CNKSR1-202ENST00000374253 C1orf186Q6ZWK4 172 aa17.58■□□□□ 0.4
CNKSR1-202ENST00000374253 SMARCAL1Q9NZC9 954 aa17.58■□□□□ 0.4
CNKSR1-202ENST00000374253 MRPS25P82663 173 aaKnown RBP17.57■□□□□ 0.4
CNKSR1-202ENST00000374253 LONRF2Q1L5Z9 754 aa17.57■□□□□ 0.4
CNKSR1-202ENST00000374253 DALRD3Q5D0E6 543 aaKnown RBP17.57■□□□□ 0.4
CNKSR1-202ENST00000374253 MTMR14Q8NCE2 650 aa17.57■□□□□ 0.4
CNKSR1-202ENST00000374253 CAGE1Q8TC20 777 aa17.57■□□□□ 0.4
CNKSR1-202ENST00000374253 TEPSINQ96N21 525 aa17.57■□□□□ 0.4
CNKSR1-202ENST00000374253 EHD2Q9NZN4 543 aa17.57■□□□□ 0.4
CNKSR1-202ENST00000374253 TRAF3IP3Q9Y228 551 aa17.57■□□□□ 0.4
CNKSR1-202ENST00000374253 TMEM150BA6NC51 233 aa17.57■□□□□ 0.4
CNKSR1-202ENST00000374253 NFKBIEO00221 500 aa17.57■□□□□ 0.4
CNKSR1-202ENST00000374253 TGFB1I1O43294 461 aa17.57■□□□□ 0.4
CNKSR1-202ENST00000374253 USO1O60763 962 aaKnown RBP17.57■□□□□ 0.4
CNKSR1-202ENST00000374253 ZMYND10O75800 440 aa17.57■□□□□ 0.4
CNKSR1-202ENST00000374253 FLOT1O75955 427 aa17.57■□□□□ 0.4
CNKSR1-202ENST00000374253 EIF2AK2P19525 551 aaKnown RBP17.57■□□□□ 0.4
CNKSR1-202ENST00000374253 MTMR2Q13614 643 aa17.57■□□□□ 0.4
CNKSR1-202ENST00000374253 GJB7Q6PEY0 223 aa17.57■□□□□ 0.4
CNKSR1-202ENST00000374253 WNK4Q96J92 1243 aa17.57■□□□□ 0.4
CNKSR1-202ENST00000374253 KCNH7Q9NS40 1196 aa17.57■□□□□ 0.4
CNKSR1-202ENST00000374253 SAMM50Q9Y512 469 aa17.57■□□□□ 0.4
CNKSR1-202ENST00000374253 POLR3GO15318 223 aaPredicted RBP17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 SLC26A4O43511 780 aa17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 CALUO43852 315 aaPredicted RBP17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 ICAM1P05362 532 aa17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 XRCC5P13010 732 aaKnown RBP17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 MARSP56192 900 aaKnown RBP17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 ASTE1Q2TB18 679 aaPredicted RBP17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 SLC9C1Q4G0N8 1177 aa17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 PAPD7Q5XG87 772 aaKnown RBP17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 FOXR2Q6PJQ5 311 aa17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 EHBP1Q8NDI1 1231 aa17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 IQCDQ96DY2 449 aa17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 TUFT1Q9NNX1 390 aa17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 ABCB6Q9NP58 842 aa17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 ADAMTS1Q9UHI8 967 aa17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 BCS1LQ9Y276 419 aa17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 TRAF1Q13077 416 aa17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 TUBB2AQ13885 445 aa17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 PPP4R3CPQ6ZMV5 832 aa17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 ZC3H3Q8IXZ2 948 aaKnown RBP17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 MICALL2Q8IY33 904 aa17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 COG1Q8WTW3 980 aa17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 CLEC4DQ8WXI8 215 aa17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 MXRA8Q9BRK3 442 aa17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 TUBB2BQ9BVA1 445 aa17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 TEKT3Q9BXF9 490 aa17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 PACSIN1Q9BY11 444 aa17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 GANQ9H2C0 597 aa17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 ZCCHC17Q9NP64 241 aaKnown RBP17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 TYW1Q9NV66 732 aaKnown RBP17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 AJAP1Q9UKB5 411 aaPredicted RBP17.56■□□□□ 0.4
CNKSR1-202ENST00000374253 ZMYM2Q9UBW7 1377 aa17.55■□□□□ 0.4
CNKSR1-202ENST00000374253 PDXKO00764 312 aa17.55■□□□□ 0.4
CNKSR1-202ENST00000374253 AFPP02771 609 aaKnown RBP17.55■□□□□ 0.4
CNKSR1-202ENST00000374253 CYP2J2P51589 502 aa17.55■□□□□ 0.4
CNKSR1-202ENST00000374253 NBPF12Q5TAG4 269 aaPredicted RBP17.55■□□□□ 0.4
CNKSR1-202ENST00000374253 NFRKBQ6P4R8 1299 aa17.55■□□□□ 0.4
CNKSR1-202ENST00000374253 PRPF38AQ8NAV1 312 aaKnown RBP17.55■□□□□ 0.4
CNKSR1-202ENST00000374253 RDH13Q8NBN7 331 aa17.55■□□□□ 0.4
CNKSR1-202ENST00000374253 EHMT1Q9H9B1 1298 aa17.55■□□□□ 0.4
CNKSR1-202ENST00000374253 PARVGQ9HBI0 331 aa17.55■□□□□ 0.4
CNKSR1-202ENST00000374253 A0A087X0T9 212 aa17.55■□□□□ 0.4
CNKSR1-202ENST00000374253 FAM228BP0C875 321 aa17.55■□□□□ 0.4
CNKSR1-202ENST00000374253 MYCLP12524 364 aaPredicted RBP17.55■□□□□ 0.4
CNKSR1-202ENST00000374253 C2orf54Q08AI8 447 aa17.55■□□□□ 0.4
CNKSR1-202ENST00000374253 ODR4Q5SWX8 454 aa17.55■□□□□ 0.4
CNKSR1-202ENST00000374253 ZNF662Q6ZS27 426 aa17.55■□□□□ 0.4
CNKSR1-202ENST00000374253 FUT8Q9BYC5 575 aa17.55■□□□□ 0.4
CNKSR1-202ENST00000374253 TSGA10Q9BZW7 698 aa17.55■□□□□ 0.4
CNKSR1-202ENST00000374253 FAM184BQ9ULE4 1060 aa17.55■□□□□ 0.4
CNKSR1-202ENST00000374253 KIF13BQ9NQT8 1826 aa17.54■□□□□ 0.4
CNKSR1-202ENST00000374253 TACC1O75410 805 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms