RNA–Protein interactions for RNA: ENST00000374000.8

PHF20-202, Transcript of PHD finger protein 20, humanhuman

TSL 1 (best)

Gene PHF20, Length 1,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-202ENST00000374000 NLRX1Q86UT6 975 aa13.13□□□□□ -0.31
PHF20-202ENST00000374000 SMARCC2Q8TAQ2 1214 aa13.13□□□□□ -0.31
PHF20-202ENST00000374000 GLG1Q92896 1179 aa13.13□□□□□ -0.31
PHF20-202ENST00000374000 NEK1Q96PY6 1258 aa13.13□□□□□ -0.31
PHF20-202ENST00000374000 DIAPH3Q9NSV4 1193 aa13.13□□□□□ -0.31
PHF20-202ENST00000374000 SQORQ9Y6N5 450 aa13.13□□□□□ -0.31
PHF20-202ENST00000374000 PRR23AA6NEV1 266 aa13.12□□□□□ -0.31
PHF20-202ENST00000374000 FGF18O76093 207 aa13.12□□□□□ -0.31
PHF20-202ENST00000374000 TECP42680 631 aa13.12□□□□□ -0.31
PHF20-202ENST00000374000 PAK2Q13177 524 aa13.12□□□□□ -0.31
PHF20-202ENST00000374000 IER5Q5VY09 327 aa13.12□□□□□ -0.31
PHF20-202ENST00000374000 ANKRD54Q6NXT1 300 aa13.12□□□□□ -0.31
PHF20-202ENST00000374000 XRRA1Q6P2D8 792 aa13.12□□□□□ -0.31
PHF20-202ENST00000374000 TMEM105Q8N8V8 129 aa13.12□□□□□ -0.31
PHF20-202ENST00000374000 GIMAP8Q8ND71 665 aaPredicted RBP13.12□□□□□ -0.31
PHF20-202ENST00000374000 SMOC2Q9H3U7 446 aa13.12□□□□□ -0.31
PHF20-202ENST00000374000 SMARCAD1Q9H4L7 1026 aa13.12□□□□□ -0.31
PHF20-202ENST00000374000 LRFN2Q9ULH4 789 aa13.12□□□□□ -0.31
PHF20-202ENST00000374000 SPTBN4Q9H254 2564 aa13.12□□□□□ -0.31
PHF20-202ENST00000374000 PTPRZ1P23471 2315 aaPredicted RBP13.11□□□□□ -0.31
PHF20-202ENST00000374000 TBKBP1A7MCY6 615 aa13.11□□□□□ -0.31
PHF20-202ENST00000374000 SARSP49591 514 aaKnown RBP13.11□□□□□ -0.31
PHF20-202ENST00000374000 UBE3AQ05086 875 aa13.11□□□□□ -0.31
PHF20-202ENST00000374000 TROAPQ12815 778 aa13.11□□□□□ -0.31
PHF20-202ENST00000374000 HDAC1Q13547 482 aaPredicted RBP13.11□□□□□ -0.31
PHF20-202ENST00000374000 SPOUT1Q5T280 376 aaKnown RBP13.11□□□□□ -0.31
PHF20-202ENST00000374000 FAM102BQ5T8I3 360 aa13.11□□□□□ -0.31
PHF20-202ENST00000374000 LLGL2Q6P1M3 1020 aa13.11□□□□□ -0.31
PHF20-202ENST00000374000 TMEM184AQ6ZMB5 413 aa13.11□□□□□ -0.31
PHF20-202ENST00000374000 ZBTB33Q86T24 672 aa13.11□□□□□ -0.31
PHF20-202ENST00000374000 COLGALT1Q8NBJ5 622 aa13.11□□□□□ -0.31
PHF20-202ENST00000374000 KREMEN2Q8NCW0 462 aa13.11□□□□□ -0.31
PHF20-202ENST00000374000 GPRASP2Q96D09 838 aa13.11□□□□□ -0.31
PHF20-202ENST00000374000 CDCA3Q99618 268 aaPredicted RBP13.11□□□□□ -0.31
PHF20-202ENST00000374000 CELF4Q9BZC1 486 aaKnown RBP13.11□□□□□ -0.31
PHF20-202ENST00000374000 PCDHB12Q9Y5F1 795 aa13.11□□□□□ -0.31
PHF20-202ENST00000374000 MYO15AQ9UKN7 3530 aa13.11□□□□□ -0.31
PHF20-202ENST00000374000 RRN3P2A6NIE6 340 aa13.11□□□□□ -0.31
PHF20-202ENST00000374000 NBL1P41271 181 aa13.11□□□□□ -0.31
PHF20-202ENST00000374000 PLPP4Q5VZY2 271 aa13.11□□□□□ -0.31
PHF20-202ENST00000374000 PLEKHM2Q8IWE5 1019 aa13.11□□□□□ -0.31
PHF20-202ENST00000374000 CDHR5Q9HBB8 845 aa13.11□□□□□ -0.31
PHF20-202ENST00000374000 ERVK-5Q9HDB9 667 aa13.11□□□□□ -0.31
PHF20-202ENST00000374000 TYW1Q9NV66 732 aaKnown RBP13.11□□□□□ -0.31
PHF20-202ENST00000374000 TMEM260Q9NX78 707 aa13.11□□□□□ -0.31
PHF20-202ENST00000374000 TRPC6Q9Y210 931 aa13.11□□□□□ -0.31
PHF20-202ENST00000374000 PCDHA2Q9Y5H9 948 aa13.11□□□□□ -0.31
PHF20-202ENST00000374000 TAF6LQ9Y6J9 622 aa13.11□□□□□ -0.31
PHF20-202ENST00000374000 M0QZ92 97 aa13.1□□□□□ -0.31
PHF20-202ENST00000374000 PIK3CDO00329 1044 aa13.1□□□□□ -0.31
PHF20-202ENST00000374000 IFIT3O14879 490 aaKnown RBP13.1□□□□□ -0.31
PHF20-202ENST00000374000 BRD1O95696 1058 aa13.1□□□□□ -0.31
PHF20-202ENST00000374000 NUBP1P53384 320 aa13.1□□□□□ -0.31
PHF20-202ENST00000374000 DIEXFQ68CQ4 756 aaKnown RBP13.1□□□□□ -0.31
PHF20-202ENST00000374000 THNSL1Q8IYQ7 743 aa13.1□□□□□ -0.31
PHF20-202ENST00000374000 CWH43Q9H720 699 aa13.1□□□□□ -0.31
PHF20-202ENST00000374000 PCDHB7Q9Y5E2 793 aa13.1□□□□□ -0.31
PHF20-202ENST00000374000 UBIAD1Q9Y5Z9 338 aa13.1□□□□□ -0.31
PHF20-202ENST00000374000 KDM3AQ9Y4C1 1321 aa13.1□□□□□ -0.31
PHF20-202ENST00000374000 HIDE1A8MVS5 230 aa13.09□□□□□ -0.31
PHF20-202ENST00000374000 ARP10275 920 aa13.09□□□□□ -0.31
PHF20-202ENST00000374000 NFX1Q12986 1120 aaKnown RBP13.09□□□□□ -0.31
PHF20-202ENST00000374000 PLCB4Q15147 1175 aa13.09□□□□□ -0.31
PHF20-202ENST00000374000 TMEM40Q8WWA1 233 aa13.09□□□□□ -0.31
PHF20-202ENST00000374000 CUL5Q93034 780 aa13.09□□□□□ -0.31
PHF20-202ENST00000374000 TSHZ2Q9NRE2 1034 aa13.09□□□□□ -0.31
PHF20-202ENST00000374000 NOC2LQ9Y3T9 749 aaKnown RBP13.09□□□□□ -0.31
PHF20-202ENST00000374000 LOXHD1Q8IVV2 1947 aa13.09□□□□□ -0.31
PHF20-202ENST00000374000 FNDC1Q4ZHG4 1894 aaPredicted RBP13.09□□□□□ -0.31
PHF20-202ENST00000374000 C2CD4DB7Z1M9 353 aa13.09□□□□□ -0.31
PHF20-202ENST00000374000 RPLP2P05387 115 aaKnown RBP13.09□□□□□ -0.31
PHF20-202ENST00000374000 FGFR1P11362 822 aa13.09□□□□□ -0.31
PHF20-202ENST00000374000 KRT76Q01546 638 aa13.09□□□□□ -0.31
PHF20-202ENST00000374000 MTMR1Q13613 665 aa13.09□□□□□ -0.31
PHF20-202ENST00000374000 B4GALNT3Q6L9W6 998 aa13.09□□□□□ -0.31
PHF20-202ENST00000374000 FRMD5Q7Z6J6 570 aa13.09□□□□□ -0.31
PHF20-202ENST00000374000 ADAM2Q99965 735 aa13.09□□□□□ -0.31
PHF20-202ENST00000374000 OSBPL3Q9H4L5 887 aa13.09□□□□□ -0.31
PHF20-202ENST00000374000 POMKQ9H5K3 350 aa13.09□□□□□ -0.31
PHF20-202ENST00000374000 AAASQ9NRG9 546 aa13.09□□□□□ -0.31
PHF20-202ENST00000374000 RGS18Q9NS28 235 aa13.09□□□□□ -0.31
PHF20-202ENST00000374000 SMIM35A0A1B0GVV1 85 aa13.08□□□□□ -0.32
PHF20-202ENST00000374000 C9IYK1 514 aa13.08□□□□□ -0.32
PHF20-202ENST00000374000 WTAPQ15007 396 aa13.08□□□□□ -0.32
PHF20-202ENST00000374000 UBE2SQ16763 222 aa13.08□□□□□ -0.32
PHF20-202ENST00000374000 PDE12Q6L8Q7 609 aaKnown RBP13.08□□□□□ -0.32
PHF20-202ENST00000374000 MTHFD1LQ6UB35 978 aa13.08□□□□□ -0.32
PHF20-202ENST00000374000 RASGRP4Q8TDF6 673 aa13.08□□□□□ -0.32
PHF20-202ENST00000374000 MRPS27Q92552 414 aaKnown RBP13.08□□□□□ -0.32
PHF20-202ENST00000374000 CDHR1Q96JP9 859 aa13.08□□□□□ -0.32
PHF20-202ENST00000374000 TCF25Q9BQ70 676 aa13.08□□□□□ -0.32
PHF20-202ENST00000374000 MYL10Q9BUA6 226 aa13.08□□□□□ -0.32
PHF20-202ENST00000374000 JADE2Q9NQC1 790 aa13.08□□□□□ -0.32
PHF20-202ENST00000374000 SORCS3Q9UPU3 1222 aa13.08□□□□□ -0.32
PHF20-202ENST00000374000 RIF1Q5UIP0 2472 aaKnown RBP13.07□□□□□ -0.32
PHF20-202ENST00000374000 FSD2A1L4K1 749 aa13.07□□□□□ -0.32
PHF20-202ENST00000374000 PBX3P40426 434 aa13.07□□□□□ -0.32
PHF20-202ENST00000374000 MTMR3Q13615 1198 aa13.07□□□□□ -0.32
PHF20-202ENST00000374000 LRRC55Q6ZSA7 311 aa13.07□□□□□ -0.32
PHF20-202ENST00000374000 RRP36Q96EU6 259 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms