RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 FRMD5Q7Z6J6 570 aa20.61■□□□□ 0.89
USP49-202ENST00000373010 MTMR14Q8NCE2 650 aa20.61■□□□□ 0.89
USP49-202ENST00000373010 AGBL3Q8NEM8 1001 aa20.61■□□□□ 0.89
USP49-202ENST00000373010 SYN2Q92777 582 aaPredicted RBP20.61■□□□□ 0.89
USP49-202ENST00000373010 ZNF577Q9BSK1 485 aa20.61■□□□□ 0.89
USP49-202ENST00000373010 SUGCTQ9HAC7 445 aa20.61■□□□□ 0.89
USP49-202ENST00000373010 TYW1Q9NV66 732 aaKnown RBP20.61■□□□□ 0.89
USP49-202ENST00000373010 WRAP73Q9P2S5 460 aaPredicted RBP20.61■□□□□ 0.89
USP49-202ENST00000373010 WNT10BO00744 389 aa20.61■□□□□ 0.89
USP49-202ENST00000373010 PLA2G6O60733 806 aa20.61■□□□□ 0.89
USP49-202ENST00000373010 NR3C1P04150 777 aa20.61■□□□□ 0.89
USP49-202ENST00000373010 NMT1P30419 496 aaKnown RBP20.61■□□□□ 0.89
USP49-202ENST00000373010 CASP4P49662 377 aa20.61■□□□□ 0.89
USP49-202ENST00000373010 BMT2Q1RMZ1 405 aa20.61■□□□□ 0.89
USP49-202ENST00000373010 C1orf186Q6ZWK4 172 aa20.61■□□□□ 0.89
USP49-202ENST00000373010 CAGE1Q8TC20 777 aa20.61■□□□□ 0.89
USP49-202ENST00000373010 ZNF341Q9BYN7 854 aa20.61■□□□□ 0.89
USP49-202ENST00000373010 UBXN6Q9BZV1 441 aa20.61■□□□□ 0.89
USP49-202ENST00000373010 NUCKS1Q9H1E3 243 aaKnown RBP20.61■□□□□ 0.89
USP49-202ENST00000373010 UNC45AQ9H3U1 944 aa20.61■□□□□ 0.89
USP49-202ENST00000373010 FAM13AO94988 1023 aa20.6■□□□□ 0.89
USP49-202ENST00000373010 SLC9A1P19634 815 aa20.6■□□□□ 0.89
USP49-202ENST00000373010 MYCT1Q8N699 235 aa20.6■□□□□ 0.89
USP49-202ENST00000373010 ZBED3Q96IU2 234 aaPredicted RBP20.6■□□□□ 0.89
USP49-202ENST00000373010 EHMT1Q9H9B1 1298 aa20.6■□□□□ 0.89
USP49-202ENST00000373010 JRKLQ9Y4A0 524 aa20.6■□□□□ 0.89
USP49-202ENST00000373010 PJA2O43164 708 aa20.59■□□□□ 0.89
USP49-202ENST00000373010 USP14P54578 494 aa20.59■□□□□ 0.89
USP49-202ENST00000373010 CKAP4Q07065 602 aaKnown RBP20.59■□□□□ 0.89
USP49-202ENST00000373010 DCAF17Q5H9S7 520 aaPredicted RBP20.59■□□□□ 0.89
USP49-202ENST00000373010 FAM133AQ8N9E0 248 aa20.59■□□□□ 0.89
USP49-202ENST00000373010 SNX12Q9UMY4 172 aa20.59■□□□□ 0.89
USP49-202ENST00000373010 POLR3GO15318 223 aaPredicted RBP20.59■□□□□ 0.89
USP49-202ENST00000373010 ERLIN1O75477 346 aa20.59■□□□□ 0.89
USP49-202ENST00000373010 AFPP02771 609 aaKnown RBP20.59■□□□□ 0.89
USP49-202ENST00000373010 SMC1AQ14683 1233 aaKnown RBP20.59■□□□□ 0.89
USP49-202ENST00000373010 ZC2HC1CQ53FD0 456 aaPredicted RBP20.59■□□□□ 0.89
USP49-202ENST00000373010 DPY19L2P1Q6NXN4 242 aa20.59■□□□□ 0.89
USP49-202ENST00000373010 KSR1Q8IVT5 923 aa20.59■□□□□ 0.89
USP49-202ENST00000373010 TEX2Q8IWB9 1127 aa20.59■□□□□ 0.89
USP49-202ENST00000373010 ZBTB9Q96C00 473 aa20.59■□□□□ 0.89
USP49-202ENST00000373010 OLFML3Q9NRN5 406 aa20.59■□□□□ 0.89
USP49-202ENST00000373010 CCPG1Q9ULG6 757 aa20.59■□□□□ 0.89
USP49-202ENST00000373010 RBAK-RBAKDNI3L0D1 243 aa20.58■□□□□ 0.89
USP49-202ENST00000373010 MAP2K7O14733 419 aa20.58■□□□□ 0.89
USP49-202ENST00000373010 BUB1O43683 1085 aa20.58■□□□□ 0.89
USP49-202ENST00000373010 ASNSP08243 561 aa20.58■□□□□ 0.89
USP49-202ENST00000373010 GAP43P17677 238 aa20.58■□□□□ 0.89
USP49-202ENST00000373010 PTGER2P43116 358 aa20.58■□□□□ 0.89
USP49-202ENST00000373010 DEFB132Q7Z7B7 95 aa20.58■□□□□ 0.89
USP49-202ENST00000373010 PKD2L1Q9P0L9 805 aa20.58■□□□□ 0.89
USP49-202ENST00000373010 ZMYM2Q9UBW7 1377 aa20.58■□□□□ 0.88
USP49-202ENST00000373010 DDX39AO00148 427 aaKnown RBP20.58■□□□□ 0.88
USP49-202ENST00000373010 TGFB1I1O43294 461 aa20.58■□□□□ 0.88
USP49-202ENST00000373010 XRCC5P13010 732 aaKnown RBP20.58■□□□□ 0.88
USP49-202ENST00000373010 DGKZQ13574 1117 aa20.58■□□□□ 0.88
USP49-202ENST00000373010 TCERG1LQ5VWI1 586 aa20.58■□□□□ 0.88
USP49-202ENST00000373010 COG1Q8WTW3 980 aa20.58■□□□□ 0.88
USP49-202ENST00000373010 ZCCHC17Q9NP64 241 aaKnown RBP20.58■□□□□ 0.88
USP49-202ENST00000373010 COL20A1Q9P218 1284 aa20.58■□□□□ 0.88
USP49-202ENST00000373010 L1RE1Q9UN81 338 aa20.58■□□□□ 0.88
USP49-202ENST00000373010 ZNF536O15090 1300 aa20.58■□□□□ 0.88
USP49-202ENST00000373010 NCK2O43639 380 aa20.57■□□□□ 0.88
USP49-202ENST00000373010 OAS2P29728 719 aaKnown RBP20.57■□□□□ 0.88
USP49-202ENST00000373010 KLHL30Q0D2K2 578 aa20.57■□□□□ 0.88
USP49-202ENST00000373010 ALS2CR12Q96Q35 445 aa20.57■□□□□ 0.88
USP49-202ENST00000373010 PSMB7Q99436 277 aa20.57■□□□□ 0.88
USP49-202ENST00000373010 NFIBO00712 420 aa20.57■□□□□ 0.88
USP49-202ENST00000373010 C2orf54Q08AI8 447 aa20.57■□□□□ 0.88
USP49-202ENST00000373010 ASIC2Q16515 512 aa20.57■□□□□ 0.88
USP49-202ENST00000373010 NFRKBQ6P4R8 1299 aa20.57■□□□□ 0.88
USP49-202ENST00000373010 CREG2Q8IUH2 290 aa20.57■□□□□ 0.88
USP49-202ENST00000373010 KCTD17Q8N5Z5 321 aa20.57■□□□□ 0.88
USP49-202ENST00000373010 BANK1Q8NDB2 785 aa20.57■□□□□ 0.88
USP49-202ENST00000373010 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.57■□□□□ 0.88
USP49-202ENST00000373010 TEKT3Q9BXF9 490 aa20.57■□□□□ 0.88
USP49-202ENST00000373010 MYOZ2Q9NPC6 264 aa20.57■□□□□ 0.88
USP49-202ENST00000373010 AIPL1Q9NZN9 384 aa20.57■□□□□ 0.88
USP49-202ENST00000373010 PCDHB13Q9Y5F0 798 aa20.57■□□□□ 0.88
USP49-202ENST00000373010 A0A087X0T9 212 aa20.56■□□□□ 0.88
USP49-202ENST00000373010 PHF20L1A8MW92 1017 aa20.56■□□□□ 0.88
USP49-202ENST00000373010 IPO5O00410 1097 aaKnown RBP20.56■□□□□ 0.88
USP49-202ENST00000373010 ICAM1P05362 532 aa20.56■□□□□ 0.88
USP49-202ENST00000373010 FAM228BP0C875 321 aa20.56■□□□□ 0.88
USP49-202ENST00000373010 EPB41P11171 864 aaKnown RBP20.56■□□□□ 0.88
USP49-202ENST00000373010 ITGB5P18084 799 aa20.56■□□□□ 0.88
USP49-202ENST00000373010 RPL13P26373 211 aaKnown RBP20.56■□□□□ 0.88
USP49-202ENST00000373010 PON1P27169 355 aa20.56■□□□□ 0.88
USP49-202ENST00000373010 MAP3K10Q02779 954 aa20.56■□□□□ 0.88
USP49-202ENST00000373010 RASA3Q14644 834 aa20.56■□□□□ 0.88
USP49-202ENST00000373010 ZNF771Q7L3S4 317 aaPredicted RBP20.56■□□□□ 0.88
USP49-202ENST00000373010 IL31RAQ8NI17 732 aa20.56■□□□□ 0.88
USP49-202ENST00000373010 HOOK2Q96ED9 719 aa20.56■□□□□ 0.88
USP49-202ENST00000373010 MXRA8Q9BRK3 442 aa20.56■□□□□ 0.88
USP49-202ENST00000373010 WDR11Q9BZH6 1224 aa20.56■□□□□ 0.88
USP49-202ENST00000373010 PRDM4Q9UKN5 801 aa20.56■□□□□ 0.88
USP49-202ENST00000373010 EGFRP00533 1210 aa20.56■□□□□ 0.88
USP49-202ENST00000373010 HSD17B4P51659 736 aa20.56■□□□□ 0.88
USP49-202ENST00000373010 NAP1L1P55209 391 aaKnown RBP20.56■□□□□ 0.88
USP49-202ENST00000373010 COG2Q14746 738 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms