RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 STXBP3O00186 592 aa12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 IRS4O14654 1257 aaPredicted RBP12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 FESP07332 822 aa12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 ACTN1P12814 892 aa12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 UBA7P41226 1012 aa12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 TNNC1P63316 161 aa12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 DUPD1Q68J44 220 aa12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 CCDC84Q86UT8 332 aaPredicted RBP12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 TPCN2Q8NHX9 752 aa12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 LRRC45Q96CN5 670 aa12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 HES6Q96HZ4 224 aa12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 NACAP1Q9BZK3 213 aa12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 YIPF3Q9GZM5 350 aa12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 GRHL1Q9NZI5 618 aa12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 PCDHA2Q9Y5H9 948 aa12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 ATP4AP20648 1035 aa12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 SARNPP82979 210 aaKnown RBP12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 ARID5AQ03989 594 aa12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 MPP2Q14168 576 aa12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 TBC1D25Q3MII6 688 aa12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 TDRD12Q587J7 1177 aaKnown RBP12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 NT5DC3Q86UY8 548 aa12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 TBC1D16Q8TBP0 767 aa12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 EPS8L3Q8TE67 593 aaKnown RBP12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 PGM2Q96G03 612 aa12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 GPR75-ASB3A0A0A6YYF3 556 aa12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 A0A0G2JS52 829 aa12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 SMAPO00193 183 aa12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 LIN7AO14910 233 aaPredicted RBP12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 CEP104O60308 925 aa12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 TECP42680 631 aa12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 LAMB2P55268 1798 aa12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 CNGA2Q16280 664 aa12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 SFMBT2Q5VUG0 894 aa12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 SAAL1Q96ER3 474 aa12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 IFT43Q96FT9 208 aa12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 SH3GL3Q99963 347 aa12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 SYT15Q9BQS2 421 aa12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 HOMER3Q9NSC5 361 aa12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 ASB3Q9Y575 518 aa12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 CDK5RAP2Q96SN8 1893 aa12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 IGSF9BQ9UPX0 1349 aa12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 SLC5A9Q2M3M2 681 aa12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 SLC9C1Q4G0N8 1177 aa12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 DYMQ7RTS9 669 aa12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 EDEM3Q9BZQ6 932 aa12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 AZI2Q9H6S1 392 aa12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 ECT2Q9H8V3 914 aa12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 NOP53Q9NZM5 478 aaKnown RBP12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 ZNF330Q9Y3S2 320 aaPredicted RBP12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 DDX3YO15523 660 aaKnown RBP12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 AADACL2Q6P093 401 aa12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 GLG1Q92896 1179 aa12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 CNOT10Q9H9A5 744 aaKnown RBP12.73□□□□□ -0.37
SMARCA1-201ENST00000371121 MROH5Q6ZUA9 1318 aa12.72□□□□□ -0.37
SMARCA1-201ENST00000371121 CFAP73A6NFT4 308 aa12.72□□□□□ -0.37
SMARCA1-201ENST00000371121 SNUPNO95149 360 aaKnown RBP12.72□□□□□ -0.37
SMARCA1-201ENST00000371121 NKX1-1Q15270 411 aaPredicted RBP12.72□□□□□ -0.37
SMARCA1-201ENST00000371121 ARMC3Q5W041 872 aa12.72□□□□□ -0.37
SMARCA1-201ENST00000371121 GUF1Q8N442 669 aaKnown RBP12.72□□□□□ -0.37
SMARCA1-201ENST00000371121 DAGLBQ8NCG7 672 aa12.72□□□□□ -0.37
SMARCA1-201ENST00000371121 SLC17A8Q8NDX2 589 aa12.72□□□□□ -0.37
SMARCA1-201ENST00000371121 DNAJC19Q96DA6 116 aa12.72□□□□□ -0.37
SMARCA1-201ENST00000371121 LSM14BQ9BX40 385 aaKnown RBP12.72□□□□□ -0.37
SMARCA1-201ENST00000371121 CPVLQ9H3G5 476 aa12.72□□□□□ -0.37
SMARCA1-201ENST00000371121 SPATS2LQ9NUQ6 558 aaKnown RBP12.72□□□□□ -0.37
SMARCA1-201ENST00000371121 NAGPAQ9UK23 515 aa12.72□□□□□ -0.37
SMARCA1-201ENST00000371121 CD2APQ9Y5K6 639 aa12.72□□□□□ -0.37
SMARCA1-201ENST00000371121 PGRMC1O00264 195 aaKnown RBP12.72□□□□□ -0.37
SMARCA1-201ENST00000371121 CYP7A1P22680 504 aa12.72□□□□□ -0.37
SMARCA1-201ENST00000371121 RPS6KA3P51812 740 aa12.72□□□□□ -0.37
SMARCA1-201ENST00000371121 SLC29A2Q14542 456 aa12.72□□□□□ -0.37
SMARCA1-201ENST00000371121 RPS6KA1Q15418 735 aa12.72□□□□□ -0.37
SMARCA1-201ENST00000371121 GRIPAP1Q4V328 841 aa12.72□□□□□ -0.37
SMARCA1-201ENST00000371121 TRIM59Q8IWR1 403 aa12.72□□□□□ -0.37
SMARCA1-201ENST00000371121 DNAJC10Q8IXB1 793 aa12.72□□□□□ -0.37
SMARCA1-201ENST00000371121 KCNV2Q8TDN2 545 aa12.72□□□□□ -0.37
SMARCA1-201ENST00000371121 SEMA4AQ9H3S1 761 aa12.72□□□□□ -0.37
SMARCA1-201ENST00000371121 CUEDC2Q9H467 287 aa12.72□□□□□ -0.37
SMARCA1-201ENST00000371121 KRIT1O00522 736 aa12.71□□□□□ -0.37
SMARCA1-201ENST00000371121 GJB6O95452 261 aa12.71□□□□□ -0.37
SMARCA1-201ENST00000371121 GH1P01241 217 aa12.71□□□□□ -0.37
SMARCA1-201ENST00000371121 CCNB1P14635 433 aa12.71□□□□□ -0.37
SMARCA1-201ENST00000371121 ENOX2Q16206 610 aaKnown RBP12.71□□□□□ -0.37
SMARCA1-201ENST00000371121 TRIM31Q9BZY9 425 aa12.71□□□□□ -0.37
SMARCA1-201ENST00000371121 OSGEPQ9NPF4 335 aa12.71□□□□□ -0.37
SMARCA1-201ENST00000371121 NUMBLQ9Y6R0 609 aa12.71□□□□□ -0.37
SMARCA1-201ENST00000371121 WNK3Q9BYP7 1800 aa12.71□□□□□ -0.37
SMARCA1-201ENST00000371121 ZNF804BA4D1E1 1349 aa12.71□□□□□ -0.37
SMARCA1-201ENST00000371121 DOT1LQ8TEK3 1739 aa12.71□□□□□ -0.37
SMARCA1-201ENST00000371121 ANKRD63C9JTQ0 380 aa12.71□□□□□ -0.37
SMARCA1-201ENST00000371121 CALM1P0DP23 149 aa12.71□□□□□ -0.37
SMARCA1-201ENST00000371121 CALM2P0DP24 149 aa12.71□□□□□ -0.37
SMARCA1-201ENST00000371121 CALM3P0DP25 149 aa12.71□□□□□ -0.37
SMARCA1-201ENST00000371121 SLC5A1P13866 664 aa12.71□□□□□ -0.37
SMARCA1-201ENST00000371121 CCND1P24385 295 aa12.71□□□□□ -0.37
SMARCA1-201ENST00000371121 MSH2P43246 934 aa12.71□□□□□ -0.37
SMARCA1-201ENST00000371121 CCDC38Q502W7 563 aa12.71□□□□□ -0.37
SMARCA1-201ENST00000371121 CNNM4Q6P4Q7 775 aa12.71□□□□□ -0.37
SMARCA1-201ENST00000371121 VSTM1Q6UX27 236 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms