RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 ASIC4Q96FT7 647 aa6.18□□□□□ -1.42
ECHDC1-204ENST00000368292 RCC1LQ96I51 464 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-204ENST00000368292 KIRREL1Q96J84 757 aa6.18□□□□□ -1.42
ECHDC1-204ENST00000368292 MAP6Q96JE9 813 aa6.18□□□□□ -1.42
ECHDC1-204ENST00000368292 HHIPL1Q96JK4 782 aa6.18□□□□□ -1.42
ECHDC1-204ENST00000368292 ZDHHC15Q96MV8 337 aa6.18□□□□□ -1.42
ECHDC1-204ENST00000368292 FCRL3Q96P31 734 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-204ENST00000368292 NAP1L4Q99733 375 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-204ENST00000368292 AP5S1Q9NUS5 200 aa6.18□□□□□ -1.42
ECHDC1-204ENST00000368292 ERVK13-1Q9NX77 482 aa6.18□□□□□ -1.42
ECHDC1-204ENST00000368292 SF3B6Q9Y3B4 125 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-204ENST00000368292 MEGF6O75095 1541 aa6.18□□□□□ -1.42
ECHDC1-204ENST00000368292 PASKQ96RG2 1323 aa6.18□□□□□ -1.42
ECHDC1-204ENST00000368292 CCDC88AQ3V6T2 1871 aa6.17□□□□□ -1.42
ECHDC1-204ENST00000368292 C4BP0C0L5 1744 aa6.17□□□□□ -1.42
ECHDC1-204ENST00000368292 FITM1A5D6W6 292 aa6.17□□□□□ -1.42
ECHDC1-204ENST00000368292 FADS2P1A8MWK0 482 aa6.17□□□□□ -1.42
ECHDC1-204ENST00000368292 PRC1O43663 620 aa6.17□□□□□ -1.42
ECHDC1-204ENST00000368292 PPM1BO75688 479 aa6.17□□□□□ -1.42
ECHDC1-204ENST00000368292 KCNA3P22001 575 aa6.17□□□□□ -1.42
ECHDC1-204ENST00000368292 ZNF143P52747 638 aaPredicted RBP6.17□□□□□ -1.42
ECHDC1-204ENST00000368292 PPP2R5DQ14738 602 aa6.17□□□□□ -1.42
ECHDC1-204ENST00000368292 FMNL3Q8IVF7 1028 aa6.17□□□□□ -1.42
ECHDC1-204ENST00000368292 OXR1Q8N573 874 aa6.17□□□□□ -1.42
ECHDC1-204ENST00000368292 OTUD6BQ8N6M0 293 aa6.17□□□□□ -1.42
ECHDC1-204ENST00000368292 PDILTQ8N807 584 aa6.17□□□□□ -1.42
ECHDC1-204ENST00000368292 ANKS4BQ8N8V4 417 aa6.17□□□□□ -1.42
ECHDC1-204ENST00000368292 ZBTB38Q8NAP3 1195 aaPredicted RBP6.17□□□□□ -1.42
ECHDC1-204ENST00000368292 ABHD4Q8TB40 342 aa6.17□□□□□ -1.42
ECHDC1-204ENST00000368292 SHISA4Q96DD7 197 aa6.17□□□□□ -1.42
ECHDC1-204ENST00000368292 FCRL2Q96LA5 508 aaPredicted RBP6.17□□□□□ -1.42
ECHDC1-204ENST00000368292 FMNL2Q96PY5 1086 aa6.17□□□□□ -1.42
ECHDC1-204ENST00000368292 PAGR1Q9BTK6 254 aa6.17□□□□□ -1.42
ECHDC1-204ENST00000368292 GBP3Q9H0R5 595 aa6.17□□□□□ -1.42
ECHDC1-204ENST00000368292 PCDH12Q9NPG4 1184 aa6.17□□□□□ -1.42
ECHDC1-204ENST00000368292 MAP3K20Q9NYL2 800 aaKnown RBP6.17□□□□□ -1.42
ECHDC1-204ENST00000368292 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.17□□□□□ -1.42
ECHDC1-204ENST00000368292 CGGBP1Q9UFW8 167 aaPredicted RBP6.17□□□□□ -1.42
ECHDC1-204ENST00000368292 TCEAL9Q9UHQ7 104 aa6.17□□□□□ -1.42
ECHDC1-204ENST00000368292 CCNL1Q9UK58 526 aaPredicted RBP6.17□□□□□ -1.42
ECHDC1-204ENST00000368292 HDAC5Q9UQL6 1122 aa6.17□□□□□ -1.42
ECHDC1-204ENST00000368292 A0A1W2PQU0 124 aa6.16□□□□□ -1.42
ECHDC1-204ENST00000368292 GLTPD2A6NH11 291 aa6.16□□□□□ -1.42
ECHDC1-204ENST00000368292 PSPNO60542 156 aa6.16□□□□□ -1.42
ECHDC1-204ENST00000368292 VAMP4O75379 141 aa6.16□□□□□ -1.42
ECHDC1-204ENST00000368292 USP2O75604 605 aaPredicted RBP6.16□□□□□ -1.42
ECHDC1-204ENST00000368292 GLI1P08151 1106 aa6.16□□□□□ -1.42
ECHDC1-204ENST00000368292 RAC2P15153 192 aa6.16□□□□□ -1.42
ECHDC1-204ENST00000368292 IFNGR1P15260 489 aa6.16□□□□□ -1.42
ECHDC1-204ENST00000368292 DPEP1P16444 411 aa6.16□□□□□ -1.42
ECHDC1-204ENST00000368292 KIR2DL1P43626 348 aaPredicted RBP6.16□□□□□ -1.42
ECHDC1-204ENST00000368292 KIR2DL2P43627 348 aaPredicted RBP6.16□□□□□ -1.42
ECHDC1-204ENST00000368292 KCNMB1Q16558 191 aa6.16□□□□□ -1.42
ECHDC1-204ENST00000368292 FOXB2Q5VYV0 432 aa6.16□□□□□ -1.42
ECHDC1-204ENST00000368292 CWF19L1Q69YN2 538 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-204ENST00000368292 ZSWIM2Q8NEG5 633 aa6.16□□□□□ -1.42
ECHDC1-204ENST00000368292 SYTL4Q96C24 671 aaPredicted RBP6.16□□□□□ -1.42
ECHDC1-204ENST00000368292 APBA2Q99767 749 aa6.16□□□□□ -1.42
ECHDC1-204ENST00000368292 CDADC1Q9BWV3 514 aa6.16□□□□□ -1.42
ECHDC1-204ENST00000368292 LGR4Q9BXB1 951 aa6.16□□□□□ -1.42
ECHDC1-204ENST00000368292 IFT57Q9NWB7 429 aa6.16□□□□□ -1.42
ECHDC1-204ENST00000368292 CPSF1Q10570 1443 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-204ENST00000368292 COL6A3P12111 3177 aa6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 IQCA1LA6NCM1 817 aa6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 RASSF10A6NK89 507 aa6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 PPP1R12AO14974 1030 aaPredicted RBP6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 PAX4O43316 350 aa6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 ASMTLO95671 621 aa6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 CAPNS1P04632 268 aa6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 GSTM1P09488 218 aa6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 SCP2P22307 547 aa6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 MAN1A1P33908 653 aa6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 POU4F1Q01851 419 aa6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 CHRNEQ04844 493 aa6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 LONRF2Q1L5Z9 754 aa6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 SV2CQ496J9 727 aa6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 TMEM67Q5HYA8 995 aa6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 DDX46Q7L014 1031 aaKnown RBP6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 SPPL2CQ8IUH8 684 aa6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 LRRC47Q8N1G4 583 aaKnown RBP6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 C1orf131Q8NDD1 294 aaKnown RBP6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 SNRNP27Q8WVK2 155 aaKnown RBP6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 GCC1Q96CN9 775 aa6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 LIN37Q96GY3 246 aaPredicted RBP6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 FEZ1Q99689 392 aa6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 KRTAP4-8Q9BYQ9 185 aa6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 INO80BQ9C086 356 aaPredicted RBP6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 RNF32Q9H0A6 362 aa6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 ARHGEF4Q9NR80 690 aa6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 GEMIN8Q9NWZ8 242 aaKnown RBP6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 TNFRSF10DQ9UBN6 386 aa6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 SFMBT1Q9UHJ3 866 aa6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 EMC9Q9Y3B6 208 aa6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 RNF114Q9Y508 228 aa6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 SCINQ9Y6U3 715 aa6.15□□□□□ -1.42
ECHDC1-204ENST00000368292 ACEP12821 1306 aa6.15□□□□□ -1.43
ECHDC1-204ENST00000368292 ROCK1Q13464 1354 aa6.15□□□□□ -1.43
ECHDC1-204ENST00000368292 EIF3AQ14152 1382 aaKnown RBP6.15□□□□□ -1.43
ECHDC1-204ENST00000368292 CCDC7Q96M83 1385 aa6.15□□□□□ -1.43
ECHDC1-204ENST00000368292 MKI67P46013 3256 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms