RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 SALL1Q9NSC2 1324 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 PPP4R3CPQ6ZMV5 832 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 USP38Q8NB14 1042 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 C3orf20Q8ND61 904 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 MDM1Q8TC05 714 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 HDAC7Q8WUI4 952 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 CARD10Q9BWT7 1032 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 KANSL2Q9H9L4 492 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 ARL2BPQ9Y2Y0 163 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 LMTK2Q8IWU2 1503 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 POTEMA6NI47 508 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 CASQ2O14958 399 aaPredicted RBP17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 SPARCL1Q14515 664 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 SPATA21Q7Z572 469 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 RHOT2Q8IXI1 618 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 USP32Q8NFA0 1604 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 A0A1W2PQJ5 194 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 MIF4GDA9UHW6 222 aaKnown RBP17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 RASA4BC9J798 803 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 STXBP3O00186 592 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 RASA4O43374 803 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 RFC4P35249 363 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 PSMC4P43686 418 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 MAP3K21Q5TCX8 1036 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 KIF2BQ8N4N8 673 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 RAPGEF5Q92565 580 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 CFAP57Q96MR6 1250 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 ERGIC2Q96RQ1 377 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 FSBPO95073 299 aa17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 AGTP01019 485 aa17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 KLRC1P26715 233 aa17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 SERPINB6P35237 376 aa17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 SARSP49591 514 aaKnown RBP17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 RPS8P62241 208 aaKnown RBP17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 HSP90AA5PQ58FG0 334 aa17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 CAVIN3Q969G5 261 aa17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 TRIM51Q9BSJ1 452 aa17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 EXOC7Q9UPT5 735 aa17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 NMT2O60551 498 aa17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 WDR78Q5VTH9 848 aa17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 USP17L2Q6R6M4 530 aa17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 COA7Q96BR5 231 aa17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 RAB20Q9NX57 234 aa17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 OVOS2A0A0J9YW53 1432 aa17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 OVOS2Q6IE36 1432 aa17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 SLC8A3P57103 927 aa17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 KAZNQ674X7 775 aa17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 DGKHQ86XP1 1220 aa17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 Q9H521 79 aa17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 ANGPTL2Q9UKU9 493 aa17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 XDHP47989 1333 aa17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 GYG2O15488 501 aa17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 CREB3O43889 395 aa17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 SYNE4Q8N205 404 aa17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 AENQ8WTP8 325 aaKnown RBP17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 BRIP1Q9BX63 1249 aa17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 RABGAP1Q9Y3P9 1069 aa17.24■□□□□ 0.35
CLSTN1-201ENST00000361311 MAP2P11137 1827 aaKnown RBP17.23■□□□□ 0.35
CLSTN1-201ENST00000361311 PRPF6O94906 941 aaKnown RBP17.23■□□□□ 0.35
CLSTN1-201ENST00000361311 PSMD6Q15008 389 aa17.23■□□□□ 0.35
CLSTN1-201ENST00000361311 TAB3Q8N5C8 712 aaPredicted RBP17.23■□□□□ 0.35
CLSTN1-201ENST00000361311 NBPF3Q9H094 633 aa17.23■□□□□ 0.35
CLSTN1-201ENST00000361311 CCDC87Q9NVE4 849 aa17.23■□□□□ 0.35
CLSTN1-201ENST00000361311 USP17L8P0C7I0 530 aa17.23■□□□□ 0.35
CLSTN1-201ENST00000361311 MAPK4P31152 587 aa17.23■□□□□ 0.35
CLSTN1-201ENST00000361311 FAF1Q9UNN5 650 aaPredicted RBP17.23■□□□□ 0.35
CLSTN1-201ENST00000361311 ZBTB12Q9Y330 459 aaPredicted RBP17.23■□□□□ 0.35
CLSTN1-201ENST00000361311 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.23■□□□□ 0.35
CLSTN1-201ENST00000361311 USP17L3A6NCW0 530 aa17.23■□□□□ 0.35
CLSTN1-201ENST00000361311 USP17L4A6NCW7 530 aa17.23■□□□□ 0.35
CLSTN1-201ENST00000361311 ANP32DO95626 131 aa17.23■□□□□ 0.35
CLSTN1-201ENST00000361311 CHRNA3P32297 505 aa17.23■□□□□ 0.35
CLSTN1-201ENST00000361311 DIXDC1Q155Q3 683 aa17.23■□□□□ 0.35
CLSTN1-201ENST00000361311 DPH6Q7L8W6 267 aa17.23■□□□□ 0.35
CLSTN1-201ENST00000361311 USP17L1Q7RTZ2 530 aa17.23■□□□□ 0.35
CLSTN1-201ENST00000361311 GSDMBQ8TAX9 411 aa17.23■□□□□ 0.35
CLSTN1-201ENST00000361311 CCDC127Q96BQ5 260 aa17.23■□□□□ 0.35
CLSTN1-201ENST00000361311 DDX39AO00148 427 aaKnown RBP17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 HSPA9P38646 679 aaKnown RBP17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 RANBP1P43487 201 aa17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 SKOR1P84550 965 aa17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 LMNB2Q03252 620 aa17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 BFSP1Q12934 665 aa17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 NT5DC1Q5TFE4 455 aa17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 EPM2AIP1Q7L775 607 aaPredicted RBP17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 SRBD1Q8N5C6 995 aaKnown RBP17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 RSAD2Q8WXG1 361 aa17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 CENPKQ9BS16 269 aa17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 TMBIM4Q9HC24 238 aa17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 DEPDC5O75140 1603 aa17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 IGF2BP3O00425 579 aaKnown RBP eCLIP17.22■□□□□ 0.354e-7■□□□□ 10.3
CLSTN1-201ENST00000361311 GLI1P08151 1106 aa17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 FGFR4P22455 802 aa17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 COASYQ13057 564 aa17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 DYNC1I2Q13409 638 aaKnown RBP17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 ODR4Q5SWX8 454 aa17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 CEP120Q8N960 986 aa17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 DYNLL2Q96FJ2 89 aa17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 WDR17Q8IZU2 1322 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms