RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 SPECC1LQ69YQ0 1117 aa10.56□□□□□ -0.72
GABPA-201ENST00000354828 POTEBQ6S5H4 581 aa10.56□□□□□ -0.72
GABPA-201ENST00000354828 RNF149Q8NC42 400 aa10.56□□□□□ -0.72
GABPA-201ENST00000354828 OR8K1Q8NGG5 319 aa10.56□□□□□ -0.72
GABPA-201ENST00000354828 CCT6BQ92526 530 aa10.56□□□□□ -0.72
GABPA-201ENST00000354828 CDCA5Q96FF9 252 aa10.56□□□□□ -0.72
GABPA-201ENST00000354828 FAM81BQ96LP2 452 aa10.56□□□□□ -0.72
GABPA-201ENST00000354828 TRIM31Q9BZY9 425 aa10.56□□□□□ -0.72
GABPA-201ENST00000354828 FBXO28Q9NVF7 368 aa10.56□□□□□ -0.72
GABPA-201ENST00000354828 MYL1P05976 194 aa10.56□□□□□ -0.72
GABPA-201ENST00000354828 VAV2P52735 878 aa10.56□□□□□ -0.72
GABPA-201ENST00000354828 TMEM62Q0P6H9 643 aa10.56□□□□□ -0.72
GABPA-201ENST00000354828 CHADLQ6NUI6 762 aa10.56□□□□□ -0.72
GABPA-201ENST00000354828 SYT10Q6XYQ8 523 aa10.56□□□□□ -0.72
GABPA-201ENST00000354828 OXER1Q8TDS5 423 aa10.56□□□□□ -0.72
GABPA-201ENST00000354828 TUBGCP2Q9BSJ2 902 aa10.56□□□□□ -0.72
GABPA-201ENST00000354828 SPZ1Q9BXG8 430 aa10.56□□□□□ -0.72
GABPA-201ENST00000354828 AMFRQ9UKV5 643 aa10.56□□□□□ -0.72
GABPA-201ENST00000354828 CAMTA1Q9Y6Y1 1673 aa10.56□□□□□ -0.72
GABPA-201ENST00000354828 SLU7O95391 586 aaKnown RBP10.55□□□□□ -0.72
GABPA-201ENST00000354828 TUBB4AP04350 444 aa10.55□□□□□ -0.72
GABPA-201ENST00000354828 RFX5P48382 616 aaPredicted RBP10.55□□□□□ -0.72
GABPA-201ENST00000354828 PSMD2Q13200 908 aa10.55□□□□□ -0.72
GABPA-201ENST00000354828 CCDC105Q8IYK2 499 aa10.55□□□□□ -0.72
GABPA-201ENST00000354828 ERO1AQ96HE7 468 aa10.55□□□□□ -0.72
GABPA-201ENST00000354828 MRPL4Q9BYD3 311 aaKnown RBP10.55□□□□□ -0.72
GABPA-201ENST00000354828 LMCD1Q9NZU5 365 aa10.55□□□□□ -0.72
GABPA-201ENST00000354828 ACTN4O43707 911 aaKnown RBP10.55□□□□□ -0.72
GABPA-201ENST00000354828 MAP7D3Q8IWC1 876 aa10.55□□□□□ -0.72
GABPA-201ENST00000354828 STMN4Q9H169 189 aaPredicted RBP10.55□□□□□ -0.72
GABPA-201ENST00000354828 FANCLQ9NW38 375 aa10.55□□□□□ -0.72
GABPA-201ENST00000354828 SUCLA2Q9P2R7 463 aaPredicted RBP10.55□□□□□ -0.72
GABPA-201ENST00000354828 STK36Q9NRP7 1315 aa10.55□□□□□ -0.72
GABPA-201ENST00000354828 POTEFA5A3E0 1075 aa10.55□□□□□ -0.72
GABPA-201ENST00000354828 RPS6KA5O75582 802 aa10.55□□□□□ -0.72
GABPA-201ENST00000354828 POTEIP0CG38 1075 aa10.55□□□□□ -0.72
GABPA-201ENST00000354828 ITIH3Q06033 890 aa10.55□□□□□ -0.72
GABPA-201ENST00000354828 PKP1Q13835 747 aa10.55□□□□□ -0.72
GABPA-201ENST00000354828 POTEGQ6S5H5 508 aa10.55□□□□□ -0.72
GABPA-201ENST00000354828 POTEEQ6S8J3 1075 aa10.55□□□□□ -0.72
GABPA-201ENST00000354828 DAAM2Q86T65 1068 aa10.55□□□□□ -0.72
GABPA-201ENST00000354828 SRBD1Q8N5C6 995 aaKnown RBP10.55□□□□□ -0.72
GABPA-201ENST00000354828 HAUS1Q96CS2 278 aa10.55□□□□□ -0.72
GABPA-201ENST00000354828 UBE2TQ9NPD8 197 aaPredicted RBP10.55□□□□□ -0.72
GABPA-201ENST00000354828 ADAMTSL3P82987 1691 aa10.55□□□□□ -0.72
GABPA-201ENST00000354828 PDHBP11177 359 aa10.55□□□□□ -0.72
GABPA-201ENST00000354828 CYP2C9P11712 490 aa10.55□□□□□ -0.72
GABPA-201ENST00000354828 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.54□□□□□ -0.72
GABPA-201ENST00000354828 GIPC1O14908 333 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 CDC42EP1Q00587 391 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 TOB2Q14106 344 aaPredicted RBP10.54□□□□□ -0.72
GABPA-201ENST00000354828 NOLC1Q14978 699 aaKnown RBP eCLIP10.54□□□□□ -0.72
GABPA-201ENST00000354828 EPHA7Q15375 998 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 ZNF658Q5TYW1 1059 aaPredicted RBP10.54□□□□□ -0.72
GABPA-201ENST00000354828 SFR1Q86XK3 245 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.54□□□□□ -0.72
GABPA-201ENST00000354828 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.54□□□□□ -0.72
GABPA-201ENST00000354828 MAIP1Q8WWC4 291 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 FAM213AQ9BRX8 229 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 XPO4Q9C0E2 1151 aaKnown RBP10.54□□□□□ -0.72
GABPA-201ENST00000354828 MROH8Q9H579 483 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 ATP11BQ9Y2G3 1177 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 COL3A1P02461 1466 aaPredicted RBP10.54□□□□□ -0.72
GABPA-201ENST00000354828 H2AFZP0C0S5 128 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 ADKP55263 362 aaKnown RBP10.54□□□□□ -0.72
GABPA-201ENST00000354828 H2AFVQ71UI9 128 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 EIF2AK1Q9BQI3 630 aaKnown RBP10.54□□□□□ -0.72
GABPA-201ENST00000354828 FAM107BQ9H098 131 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 LMBRD1Q9NUN5 540 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 CHGBP05060 677 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 PGK2P07205 417 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 RHOXF2BP0C7M4 288 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 CIITAP33076 1130 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 GPC3P51654 580 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 PTPROQ16827 1216 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 XKR3Q5GH77 459 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 FAM83AQ86UY5 434 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 PGBD4Q96DM1 585 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 RHOXF2Q9BQY4 288 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 IFT122Q9HBG6 1241 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 KIF20BQ96Q89 1820 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 MYO1FO00160 1098 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 ZNF75DP51815 510 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 SLC12A2P55011 1212 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 LAMC2Q13753 1193 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 CEP128Q6ZU80 1094 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 SGMS1Q86VZ5 419 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 NAPGQ99747 312 aaPredicted RBP10.54□□□□□ -0.72
GABPA-201ENST00000354828 KIAA1586Q9HCI6 787 aa10.54□□□□□ -0.72
GABPA-201ENST00000354828 MAP3K20Q9NYL2 800 aaKnown RBP10.54□□□□□ -0.72
GABPA-201ENST00000354828 IL1R1P14778 569 aa10.53□□□□□ -0.72
GABPA-201ENST00000354828 VEPH1Q14D04 833 aa10.53□□□□□ -0.72
GABPA-201ENST00000354828 ZNF394Q53GI3 561 aa10.53□□□□□ -0.72
GABPA-201ENST00000354828 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.53□□□□□ -0.72
GABPA-201ENST00000354828 YAF2Q8IY57 180 aa10.53□□□□□ -0.72
GABPA-201ENST00000354828 GCNT4Q9P109 453 aa10.53□□□□□ -0.72
GABPA-201ENST00000354828 NOC2LQ9Y3T9 749 aaKnown RBP10.53□□□□□ -0.72
GABPA-201ENST00000354828 DDTLA6NHG4 134 aaPredicted RBP10.53□□□□□ -0.72
GABPA-201ENST00000354828 CXCL11O14625 94 aa10.53□□□□□ -0.72
GABPA-201ENST00000354828 RIOK3O14730 519 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms