RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 PCDHA13Q9Y5I0 950 aa8.29□□□□□ -1.08
C11orf54-202ENST00000354421 DUSP10Q9Y6W6 482 aa8.29□□□□□ -1.08
C11orf54-202ENST00000354421 ANKRD36CQ5JPF3 1778 aa8.29□□□□□ -1.08
C11orf54-202ENST00000354421 IRS4O14654 1257 aaPredicted RBP8.29□□□□□ -1.08
C11orf54-202ENST00000354421 MNAT1P51948 309 aa8.29□□□□□ -1.08
C11orf54-202ENST00000354421 SETQ01105 290 aaPredicted RBP8.29□□□□□ -1.08
C11orf54-202ENST00000354421 TROAPQ12815 778 aa8.29□□□□□ -1.08
C11orf54-202ENST00000354421 DRP2Q13474 957 aa8.29□□□□□ -1.08
C11orf54-202ENST00000354421 PLCB4Q15147 1175 aa8.29□□□□□ -1.08
C11orf54-202ENST00000354421 NAALADL2Q58DX5 795 aa8.29□□□□□ -1.08
C11orf54-202ENST00000354421 FBXW10Q5XX13 1052 aa8.29□□□□□ -1.08
C11orf54-202ENST00000354421 IQCKQ8N0W5 287 aa8.29□□□□□ -1.08
C11orf54-202ENST00000354421 OTUD6BQ8N6M0 293 aa8.29□□□□□ -1.08
C11orf54-202ENST00000354421 P2RX5Q93086 422 aa8.29□□□□□ -1.08
C11orf54-202ENST00000354421 EPN3Q9H201 632 aa8.29□□□□□ -1.08
C11orf54-202ENST00000354421 CUEDC2Q9H467 287 aa8.29□□□□□ -1.08
C11orf54-202ENST00000354421 CXorf56Q9H5V9 222 aa8.29□□□□□ -1.08
C11orf54-202ENST00000354421 GDF3Q9NR23 364 aa8.29□□□□□ -1.08
C11orf54-202ENST00000354421 KBTBD4Q9NVX7 518 aa8.29□□□□□ -1.08
C11orf54-202ENST00000354421 LRWD1Q9UFC0 647 aa8.29□□□□□ -1.08
C11orf54-202ENST00000354421 MAP4K5Q9Y4K4 846 aa8.29□□□□□ -1.08
C11orf54-202ENST00000354421 MACROD2A1Z1Q3 448 aa8.28□□□□□ -1.08
C11orf54-202ENST00000354421 NDUFAB1O14561 156 aa8.28□□□□□ -1.08
C11orf54-202ENST00000354421 SCG2P13521 617 aa8.28□□□□□ -1.08
C11orf54-202ENST00000354421 GYS1P13807 737 aa8.28□□□□□ -1.08
C11orf54-202ENST00000354421 TRIM21P19474 475 aaKnown RBP8.28□□□□□ -1.08
C11orf54-202ENST00000354421 CALML3P27482 149 aa8.28□□□□□ -1.08
C11orf54-202ENST00000354421 MCM7P33993 719 aa8.28□□□□□ -1.08
C11orf54-202ENST00000354421 PAFAH1B1P43034 410 aa8.28□□□□□ -1.08
C11orf54-202ENST00000354421 NAP1L1P55209 391 aaKnown RBP8.28□□□□□ -1.08
C11orf54-202ENST00000354421 HUNKP57058 714 aa8.28□□□□□ -1.08
C11orf54-202ENST00000354421 NLRP5P59047 1200 aa8.28□□□□□ -1.08
C11orf54-202ENST00000354421 CYP27A1Q02318 531 aa8.28□□□□□ -1.08
C11orf54-202ENST00000354421 PAK2Q13177 524 aa8.28□□□□□ -1.08
C11orf54-202ENST00000354421 PDCLQ13371 301 aa8.28□□□□□ -1.08
C11orf54-202ENST00000354421 MIIPQ5JXC2 388 aa8.28□□□□□ -1.08
C11orf54-202ENST00000354421 IFIT1BQ5T764 474 aaKnown RBP8.28□□□□□ -1.08
C11orf54-202ENST00000354421 RGMBQ6NW40 437 aa8.28□□□□□ -1.08
C11orf54-202ENST00000354421 PIK3AP1Q6ZUJ8 805 aa8.28□□□□□ -1.08
C11orf54-202ENST00000354421 IFT20Q8IY31 132 aa8.28□□□□□ -1.08
C11orf54-202ENST00000354421 CSGALNACT2Q8N6G5 542 aa8.28□□□□□ -1.08
C11orf54-202ENST00000354421 CCDC42Q96M95 316 aa8.28□□□□□ -1.08
C11orf54-202ENST00000354421 ZIM3Q96PE6 472 aa8.28□□□□□ -1.08
C11orf54-202ENST00000354421 ALS2CR12Q96Q35 445 aa8.28□□□□□ -1.08
C11orf54-202ENST00000354421 MAP10Q9P2G4 905 aa8.28□□□□□ -1.08
C11orf54-202ENST00000354421 DNMT3LQ9UJW3 386 aa8.28□□□□□ -1.08
C11orf54-202ENST00000354421 PLAGL2Q9UPG8 496 aa8.28□□□□□ -1.08
C11orf54-202ENST00000354421 MAPK8IP1Q9UQF2 711 aa8.28□□□□□ -1.08
C11orf54-202ENST00000354421 SAMM50Q9Y512 469 aa8.28□□□□□ -1.08
C11orf54-202ENST00000354421 CAPN6Q9Y6Q1 641 aa8.28□□□□□ -1.08
C11orf54-202ENST00000354421 CAPN7Q9Y6W3 813 aa8.28□□□□□ -1.08
C11orf54-202ENST00000354421 hCG_1642624A0A1W2PR95 340 aa8.27□□□□□ -1.09
C11orf54-202ENST00000354421 GPR25O00155 361 aa8.27□□□□□ -1.09
C11orf54-202ENST00000354421 PES1O00541 588 aaKnown RBP8.27□□□□□ -1.09
C11orf54-202ENST00000354421 MOCS3O95396 460 aa8.27□□□□□ -1.09
C11orf54-202ENST00000354421 GPTP24298 496 aa8.27□□□□□ -1.09
C11orf54-202ENST00000354421 LSP1P33241 339 aa8.27□□□□□ -1.09
C11orf54-202ENST00000354421 COL9A2Q14055 689 aaPredicted RBP8.27□□□□□ -1.09
C11orf54-202ENST00000354421 PTGISQ16647 500 aa8.27□□□□□ -1.09
C11orf54-202ENST00000354421 PFKFB3Q16875 520 aaPredicted RBP8.27□□□□□ -1.09
C11orf54-202ENST00000354421 SKIDA1Q1XH10 827 aa8.27□□□□□ -1.09
C11orf54-202ENST00000354421 CCDC96Q2M329 555 aa8.27□□□□□ -1.09
C11orf54-202ENST00000354421 FKBP15Q5T1M5 1219 aa8.27□□□□□ -1.09
C11orf54-202ENST00000354421 CFAP58Q5T655 872 aa8.27□□□□□ -1.09
C11orf54-202ENST00000354421 CCDC181Q5TID7 509 aa8.27□□□□□ -1.09
C11orf54-202ENST00000354421 FAM109BQ6ICB4 259 aaPredicted RBP8.27□□□□□ -1.09
C11orf54-202ENST00000354421 PPP4R3AQ6IN85 833 aa8.27□□□□□ -1.09
C11orf54-202ENST00000354421 SRBD1Q8N5C6 995 aaKnown RBP8.27□□□□□ -1.09
C11orf54-202ENST00000354421 RNF10Q8N5U6 811 aaKnown RBP8.27□□□□□ -1.09
C11orf54-202ENST00000354421 EIF1ADQ8N9N8 165 aaKnown RBP8.27□□□□□ -1.09
C11orf54-202ENST00000354421 C3orf20Q8ND61 904 aa8.27□□□□□ -1.09
C11orf54-202ENST00000354421 ZNF473Q8WTR7 871 aaKnown RBP8.27□□□□□ -1.09
C11orf54-202ENST00000354421 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.27□□□□□ -1.09
C11orf54-202ENST00000354421 CCDC47Q96A33 483 aaKnown RBP8.27□□□□□ -1.09
C11orf54-202ENST00000354421 CNOT6LQ96LI5 555 aaKnown RBP8.27□□□□□ -1.09
C11orf54-202ENST00000354421 BRIP1Q9BX63 1249 aa8.27□□□□□ -1.09
C11orf54-202ENST00000354421 IFIH1Q9BYX4 1025 aaKnown RBP8.27□□□□□ -1.09
C11orf54-202ENST00000354421 EDEM3Q9BZQ6 932 aa8.27□□□□□ -1.09
C11orf54-202ENST00000354421 TAOK3Q9H2K8 898 aa8.27□□□□□ -1.09
C11orf54-202ENST00000354421 MLXIPQ9HAP2 919 aa8.27□□□□□ -1.09
C11orf54-202ENST00000354421 SH3GLB2Q9NR46 395 aa8.27□□□□□ -1.09
C11orf54-202ENST00000354421 ARHGAP20Q9P2F6 1191 aa8.27□□□□□ -1.09
C11orf54-202ENST00000354421 SIK3Q9Y2K2 1263 aa8.27□□□□□ -1.09
C11orf54-202ENST00000354421 DOT1LQ8TEK3 1739 aa8.27□□□□□ -1.09
C11orf54-202ENST00000354421 ABCB11O95342 1321 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 GRID2IPA4D2P6 1211 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 HMGB1P1B2RPK0 211 aaPredicted RBP8.26□□□□□ -1.09
C11orf54-202ENST00000354421 CFAP99D6REC4 459 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 CHUKO15111 745 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 CYP7A1P22680 504 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 HOXA7P31268 230 aaPredicted RBP8.26□□□□□ -1.09
C11orf54-202ENST00000354421 EIF4A3P38919 411 aaKnown RBP8.26□□□□□ -1.09
C11orf54-202ENST00000354421 PRPHP41219 470 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 MTIF2P46199 727 aaKnown RBP8.26□□□□□ -1.09
C11orf54-202ENST00000354421 KLK7P49862 253 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 KIF11P52732 1056 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 SMTNP53814 917 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 SLC7A5Q01650 507 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 ACTN3Q08043 901 aaPredicted RBP8.26□□□□□ -1.09
C11orf54-202ENST00000354421 HLFQ16534 295 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms