RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 RPS8P62241 208 aaKnown RBP19.4■□□□□ 0.7
APP-202ENST00000348990 MAP2K1Q02750 393 aaPredicted RBP19.4■□□□□ 0.7
APP-202ENST00000348990 ACCSLQ4AC99 568 aa19.4■□□□□ 0.7
APP-202ENST00000348990 CCDC38Q502W7 563 aa19.4■□□□□ 0.7
APP-202ENST00000348990 GJB7Q6PEY0 223 aa19.4■□□□□ 0.7
APP-202ENST00000348990 STK38LQ9Y2H1 464 aa19.4■□□□□ 0.7
APP-202ENST00000348990 PCDHB13Q9Y5F0 798 aa19.4■□□□□ 0.7
APP-202ENST00000348990 CCT8L1PA6NM43 557 aa19.4■□□□□ 0.7
APP-202ENST00000348990 F8VZ95 297 aa19.4■□□□□ 0.7
APP-202ENST00000348990 CCDC188H7C350 402 aa19.4■□□□□ 0.7
APP-202ENST00000348990 CAMTA2O94983 1202 aa19.4■□□□□ 0.7
APP-202ENST00000348990 PDE6BP35913 854 aa19.4■□□□□ 0.7
APP-202ENST00000348990 LLGL1Q15334 1064 aa19.4■□□□□ 0.7
APP-202ENST00000348990 ECM1Q16610 540 aa19.4■□□□□ 0.7
APP-202ENST00000348990 ARMC9Q7Z3E5 817 aa19.4■□□□□ 0.7
APP-202ENST00000348990 TXNRD3Q86VQ6 643 aa19.4■□□□□ 0.7
APP-202ENST00000348990 LRRC47Q8N1G4 583 aaKnown RBP19.4■□□□□ 0.7
APP-202ENST00000348990 TPCN2Q8NHX9 752 aa19.4■□□□□ 0.7
APP-202ENST00000348990 AZI2Q9H6S1 392 aa19.4■□□□□ 0.7
APP-202ENST00000348990 FAM114A2Q9NRY5 505 aa19.4■□□□□ 0.7
APP-202ENST00000348990 DDX25Q9UHL0 483 aaKnown RBP19.4■□□□□ 0.7
APP-202ENST00000348990 SHBGP04278 402 aa19.4■□□□□ 0.7
APP-202ENST00000348990 UCHL3P15374 230 aa19.4■□□□□ 0.7
APP-202ENST00000348990 KCNQ4P56696 695 aa19.4■□□□□ 0.7
APP-202ENST00000348990 TRIM59Q8IWR1 403 aa19.4■□□□□ 0.7
APP-202ENST00000348990 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.4■□□□□ 0.72e-6■■■■■ 78.5
APP-202ENST00000348990 GOLGA6L10A0A0M3HER8 536 aa19.39■□□□□ 0.69
APP-202ENST00000348990 DRD4P21917 467 aa19.39■□□□□ 0.69
APP-202ENST00000348990 EMC10Q5UCC4 262 aa19.39■□□□□ 0.69
APP-202ENST00000348990 ACTRT1Q8TDG2 376 aa19.39■□□□□ 0.69
APP-202ENST00000348990 STAMBPL1Q96FJ0 436 aa19.39■□□□□ 0.69
APP-202ENST00000348990 DAAM1Q9Y4D1 1078 aa19.39■□□□□ 0.69
APP-202ENST00000348990 XRCC5P13010 732 aaKnown RBP19.39■□□□□ 0.69
APP-202ENST00000348990 LRRC34Q8IZ02 419 aa19.39■□□□□ 0.69
APP-202ENST00000348990 PRMT1Q99873 361 aaKnown RBP19.39■□□□□ 0.69
APP-202ENST00000348990 ZNF287Q9HBT7 754 aa19.39■□□□□ 0.69
APP-202ENST00000348990 POTEB3A0JP26 581 aa19.38■□□□□ 0.69
APP-202ENST00000348990 EIF4E1BA6NMX2 242 aaKnown RBP19.38■□□□□ 0.69
APP-202ENST00000348990 POTECB2RU33 542 aa19.38■□□□□ 0.69
APP-202ENST00000348990 CLGNO14967 610 aa19.38■□□□□ 0.69
APP-202ENST00000348990 POTEBQ6S5H4 581 aa19.38■□□□□ 0.69
APP-202ENST00000348990 FBXO33Q7Z6M2 555 aa19.38■□□□□ 0.69
APP-202ENST00000348990 CNOT10Q9H9A5 744 aaKnown RBP19.38■□□□□ 0.69
APP-202ENST00000348990 NR2E1Q9Y466 385 aa19.38■□□□□ 0.69
APP-202ENST00000348990 COL5A2P05997 1499 aaPredicted RBP19.38■□□□□ 0.69
APP-202ENST00000348990 CLIC2O15247 247 aa19.38■□□□□ 0.69
APP-202ENST00000348990 PLA2G4BP0C869 781 aa19.38■□□□□ 0.69
APP-202ENST00000348990 CDC25CP30307 473 aa19.38■□□□□ 0.69
APP-202ENST00000348990 ELF3P78545 371 aaPredicted RBP19.38■□□□□ 0.69
APP-202ENST00000348990 DR1Q01658 176 aa19.38■□□□□ 0.69
APP-202ENST00000348990 C1orf131Q8NDD1 294 aaKnown RBP19.38■□□□□ 0.69
APP-202ENST00000348990 CEP63Q96MT8 703 aa19.38■□□□□ 0.69
APP-202ENST00000348990 RAB17Q9H0T7 212 aa19.38■□□□□ 0.69
APP-202ENST00000348990 MLXIPLQ9NP71 852 aa19.38■□□□□ 0.69
APP-202ENST00000348990 OSGEPQ9NPF4 335 aa19.38■□□□□ 0.69
APP-202ENST00000348990 AIPL1Q9NZN9 384 aa19.38■□□□□ 0.69
APP-202ENST00000348990 MEIS1O00470 390 aa19.38■□□□□ 0.69
APP-202ENST00000348990 ATP6V1G2O95670 118 aa19.38■□□□□ 0.69
APP-202ENST00000348990 RASA1P20936 1047 aa19.38■□□□□ 0.69
APP-202ENST00000348990 PEX19P40855 299 aa19.38■□□□□ 0.69
APP-202ENST00000348990 MKRN4PQ13434 485 aaPredicted RBP19.38■□□□□ 0.69
APP-202ENST00000348990 LRRC14Q15048 493 aa19.38■□□□□ 0.69
APP-202ENST00000348990 INTS5Q6P9B9 1019 aaKnown RBP19.38■□□□□ 0.69
APP-202ENST00000348990 OTUD6AQ7L8S5 288 aa19.37■□□□□ 0.69
APP-202ENST00000348990 NSMCE1Q8WV22 266 aa19.37■□□□□ 0.69
APP-202ENST00000348990 CCT6BQ92526 530 aa19.37■□□□□ 0.69
APP-202ENST00000348990 CEP95Q96GE4 821 aa19.37■□□□□ 0.69
APP-202ENST00000348990 MTMR9Q96QG7 549 aa19.37■□□□□ 0.69
APP-202ENST00000348990 SPZ1Q9BXG8 430 aa19.37■□□□□ 0.69
APP-202ENST00000348990 AFPP02771 609 aaKnown RBP19.37■□□□□ 0.69
APP-202ENST00000348990 IFI35P80217 286 aaPredicted RBP19.37■□□□□ 0.69
APP-202ENST00000348990 COBLL1Q53SF7 1204 aa19.37■□□□□ 0.69
APP-202ENST00000348990 SYCE1Q8N0S2 351 aa19.37■□□□□ 0.69
APP-202ENST00000348990 NEK9Q8TD19 979 aa19.37■□□□□ 0.69
APP-202ENST00000348990 CUL5Q93034 780 aa19.37■□□□□ 0.69
APP-202ENST00000348990 CALR3Q96L12 384 aaKnown RBP19.37■□□□□ 0.69
APP-202ENST00000348990 TRIM6Q9C030 488 aaPredicted RBP19.37■□□□□ 0.69
APP-202ENST00000348990 TMEM59LQ9UK28 342 aa19.37■□□□□ 0.69
APP-202ENST00000348990 CDK8P49336 464 aa19.36■□□□□ 0.69
APP-202ENST00000348990 WLSQ5T9L3 541 aa19.36■□□□□ 0.69
APP-202ENST00000348990 TEX11Q8IYF3 940 aa19.36■□□□□ 0.69
APP-202ENST00000348990 SLITRK6Q9H5Y7 841 aa19.36■□□□□ 0.69
APP-202ENST00000348990 FXR2P51116 673 aaKnown RBP eCLIP19.36■□□□□ 0.694e-13■■□□□ 11.5
APP-202ENST00000348990 CLEC10AQ8IUN9 316 aa19.36■□□□□ 0.69
APP-202ENST00000348990 GLYCTKQ8IVS8 523 aa19.36■□□□□ 0.69
APP-202ENST00000348990 SCFD1Q8WVM8 642 aa19.36■□□□□ 0.69
APP-202ENST00000348990 CTNNBL1Q8WYA6 563 aaPredicted RBP19.36■□□□□ 0.69
APP-202ENST00000348990 DNAJC19Q96DA6 116 aa19.36■□□□□ 0.69
APP-202ENST00000348990 GPR101Q96P66 508 aaPredicted RBP19.36■□□□□ 0.69
APP-202ENST00000348990 CCDC169A6NNP5 214 aa19.36■□□□□ 0.69
APP-202ENST00000348990 F8W031 263 aaPredicted RBP19.36■□□□□ 0.69
APP-202ENST00000348990 STAT3P40763 770 aa19.36■□□□□ 0.69
APP-202ENST00000348990 MMP14P50281 582 aa19.36■□□□□ 0.69
APP-202ENST00000348990 PMS2P54278 862 aa19.36■□□□□ 0.69
APP-202ENST00000348990 PABPC4Q13310 644 aaKnown RBP eCLIP19.36■□□□□ 0.69
APP-202ENST00000348990 SLC29A2Q14542 456 aa19.36■□□□□ 0.69
APP-202ENST00000348990 NBPF9Q3BBW0 867 aa19.36■□□□□ 0.69
APP-202ENST00000348990 MARCH10Q8NA82 808 aaPredicted RBP19.36■□□□□ 0.69
APP-202ENST00000348990 C3orf20Q8ND61 904 aa19.36■□□□□ 0.69
APP-202ENST00000348990 KCNK9Q9NPC2 374 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms