RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 FAM83AQ86UY5 434 aa20.61■□□□□ 0.89
PSPC1-201ENST00000338910 CSGALNACT2Q8N6G5 542 aa20.61■□□□□ 0.89
PSPC1-201ENST00000338910 DHTKD1Q96HY7 919 aaPredicted RBP20.61■□□□□ 0.89
PSPC1-201ENST00000338910 MYH7BA7E2Y1 1941 aa20.61■□□□□ 0.89
PSPC1-201ENST00000338910 HNRNPH3P31942 346 aaKnown RBP20.61■□□□□ 0.89
PSPC1-201ENST00000338910 SEMA3FQ13275 785 aa20.61■□□□□ 0.89
PSPC1-201ENST00000338910 TNIP1Q15025 636 aa20.61■□□□□ 0.89
PSPC1-201ENST00000338910 KIAA1755Q5JYT7 1200 aa20.61■□□□□ 0.89
PSPC1-201ENST00000338910 EHD2Q9NZN4 543 aa20.61■□□□□ 0.89
PSPC1-201ENST00000338910 PCDHA13Q9Y5I0 950 aa20.61■□□□□ 0.89
PSPC1-201ENST00000338910 ZNF233A6NK53 670 aa20.6■□□□□ 0.89
PSPC1-201ENST00000338910 CCDC172P0C7W6 258 aa20.6■□□□□ 0.89
PSPC1-201ENST00000338910 CXCR5P32302 372 aa20.6■□□□□ 0.89
PSPC1-201ENST00000338910 USP11P51784 963 aa20.6■□□□□ 0.89
PSPC1-201ENST00000338910 RASSF7Q02833 373 aa20.6■□□□□ 0.89
PSPC1-201ENST00000338910 ANKRD40Q6AI12 368 aa20.6■□□□□ 0.89
PSPC1-201ENST00000338910 C8orf74Q6P047 294 aa20.6■□□□□ 0.89
PSPC1-201ENST00000338910 MICALCLQ6ZW33 695 aa20.6■□□□□ 0.89
PSPC1-201ENST00000338910 RAD54LQ92698 747 aa20.6■□□□□ 0.89
PSPC1-201ENST00000338910 ERGIC2Q96RQ1 377 aa20.6■□□□□ 0.89
PSPC1-201ENST00000338910 ZBTB21Q9ULJ3 1066 aa20.6■□□□□ 0.89
PSPC1-201ENST00000338910 PLAGL2Q9UPG8 496 aa20.6■□□□□ 0.89
PSPC1-201ENST00000338910 CD2APQ9Y5K6 639 aa20.6■□□□□ 0.89
PSPC1-201ENST00000338910 APBA1Q02410 837 aa20.59■□□□□ 0.89
PSPC1-201ENST00000338910 GLE1Q53GS7 698 aaKnown RBP20.59■□□□□ 0.89
PSPC1-201ENST00000338910 MIIPQ5JXC2 388 aa20.59■□□□□ 0.89
PSPC1-201ENST00000338910 CCDC181Q5TID7 509 aa20.59■□□□□ 0.89
PSPC1-201ENST00000338910 P2RX5Q93086 422 aa20.59■□□□□ 0.89
PSPC1-201ENST00000338910 JPH2Q9BR39 696 aaPredicted RBP20.59■□□□□ 0.89
PSPC1-201ENST00000338910 ARHGAP20Q9P2F6 1191 aa20.59■□□□□ 0.89
PSPC1-201ENST00000338910 PRR12Q9ULL5 1215 aa20.59■□□□□ 0.89
PSPC1-201ENST00000338910 CLSTN1O94985 981 aa20.59■□□□□ 0.89
PSPC1-201ENST00000338910 HOXA13P31271 388 aaPredicted RBP20.59■□□□□ 0.89
PSPC1-201ENST00000338910 GUCY1A3Q02108 690 aa20.59■□□□□ 0.89
PSPC1-201ENST00000338910 CNNM4Q6P4Q7 775 aa20.59■□□□□ 0.89
PSPC1-201ENST00000338910 KIAA0895Q8NCT3 520 aa20.59■□□□□ 0.89
PSPC1-201ENST00000338910 PSMB7Q99436 277 aa20.59■□□□□ 0.89
PSPC1-201ENST00000338910 ARHGEF10LQ9HCE6 1279 aa20.59■□□□□ 0.89
PSPC1-201ENST00000338910 RBM12Q9NTZ6 932 aaKnown RBP20.59■□□□□ 0.89
PSPC1-201ENST00000338910 ARFGEF1Q9Y6D6 1849 aa20.58■□□□□ 0.89
PSPC1-201ENST00000338910 LCA5LO95447 670 aa20.58■□□□□ 0.89
PSPC1-201ENST00000338910 CCNE1P24864 410 aa20.58■□□□□ 0.89
PSPC1-201ENST00000338910 ARHGAP4P98171 946 aa20.58■□□□□ 0.89
PSPC1-201ENST00000338910 ZYXQ15942 572 aaKnown RBP20.58■□□□□ 0.89
PSPC1-201ENST00000338910 ZNF473Q8WTR7 871 aaKnown RBP20.58■□□□□ 0.89
PSPC1-201ENST00000338910 CNOT6LQ96LI5 555 aaKnown RBP20.58■□□□□ 0.89
PSPC1-201ENST00000338910 PCMTD1Q96MG8 357 aaPredicted RBP20.58■□□□□ 0.89
PSPC1-201ENST00000338910 ALS2CR12Q96Q35 445 aa20.58■□□□□ 0.89
PSPC1-201ENST00000338910 DONSONQ9NYP3 566 aa20.58■□□□□ 0.89
PSPC1-201ENST00000338910 PGAP2Q9UHJ9 254 aa20.58■□□□□ 0.89
PSPC1-201ENST00000338910 TBC1D12O60347 775 aa20.58■□□□□ 0.88
PSPC1-201ENST00000338910 PPP1R37O75864 691 aa20.58■□□□□ 0.88
PSPC1-201ENST00000338910 PAFAH1B1P43034 410 aa20.58■□□□□ 0.88
PSPC1-201ENST00000338910 PRELPP51888 382 aa20.58■□□□□ 0.88
PSPC1-201ENST00000338910 PTGISQ16647 500 aa20.58■□□□□ 0.88
PSPC1-201ENST00000338910 PRR16Q569H4 304 aa20.58■□□□□ 0.88
PSPC1-201ENST00000338910 SAMD1Q6SPF0 538 aaPredicted RBP20.58■□□□□ 0.88
PSPC1-201ENST00000338910 CD302Q8IX05 232 aa20.58■□□□□ 0.88
PSPC1-201ENST00000338910 DDX12PQ92771 950 aa20.58■□□□□ 0.88
PSPC1-201ENST00000338910 CCDC43Q96MW1 224 aaKnown RBP20.58■□□□□ 0.88
PSPC1-201ENST00000338910 NAP1L4Q99733 375 aaKnown RBP20.58■□□□□ 0.88
PSPC1-201ENST00000338910 GDF3Q9NR23 364 aa20.58■□□□□ 0.88
PSPC1-201ENST00000338910 TMX2Q9Y320 296 aa20.58■□□□□ 0.88
PSPC1-201ENST00000338910 PTGER2P43116 358 aa20.57■□□□□ 0.88
PSPC1-201ENST00000338910 KIF11P52732 1056 aa20.57■□□□□ 0.88
PSPC1-201ENST00000338910 AP3B2Q13367 1082 aa20.57■□□□□ 0.88
PSPC1-201ENST00000338910 RASA3Q14644 834 aa20.57■□□□□ 0.88
PSPC1-201ENST00000338910 TMEM119Q4V9L6 283 aa20.57■□□□□ 0.88
PSPC1-201ENST00000338910 FAM83BQ5T0W9 1011 aa20.57■□□□□ 0.88
PSPC1-201ENST00000338910 CFAP58Q5T655 872 aa20.57■□□□□ 0.88
PSPC1-201ENST00000338910 BTNL9Q6UXG8 535 aa20.57■□□□□ 0.88
PSPC1-201ENST00000338910 MREGQ8N565 214 aa20.57■□□□□ 0.88
PSPC1-201ENST00000338910 TACO1Q9BSH4 297 aaKnown RBP20.57■□□□□ 0.88
PSPC1-201ENST00000338910 POLD4Q9HCU8 107 aa20.57■□□□□ 0.88
PSPC1-201ENST00000338910 SPDYE3A6NKU9 549 aa20.57■□□□□ 0.88
PSPC1-201ENST00000338910 SSBP05455 408 aaKnown RBP eCLIP20.57■□□□□ 0.88
PSPC1-201ENST00000338910 GLI1P08151 1106 aa20.57■□□□□ 0.88
PSPC1-201ENST00000338910 FAM153BP0C7A2 387 aa20.57■□□□□ 0.88
PSPC1-201ENST00000338910 NR1D1P20393 614 aa20.57■□□□□ 0.88
PSPC1-201ENST00000338910 STAT3P40763 770 aa20.57■□□□□ 0.88
PSPC1-201ENST00000338910 STAT2P52630 851 aa20.57■□□□□ 0.88
PSPC1-201ENST00000338910 FAM153CQ494X1 144 aa20.57■□□□□ 0.88
PSPC1-201ENST00000338910 UNC13DQ70J99 1090 aa20.57■□□□□ 0.88
PSPC1-201ENST00000338910 IFT20Q8IY31 132 aa20.57■□□□□ 0.88
PSPC1-201ENST00000338910 PIK3R5Q8WYR1 880 aa20.57■□□□□ 0.88
PSPC1-201ENST00000338910 TLR10Q9BXR5 811 aa20.57■□□□□ 0.88
PSPC1-201ENST00000338910 VCPKMTQ9H867 229 aa20.57■□□□□ 0.88
PSPC1-201ENST00000338910 KCNMB3Q9NPA1 279 aa20.57■□□□□ 0.88
PSPC1-201ENST00000338910 FAM153AQ9UHL3 310 aa20.57■□□□□ 0.88
PSPC1-201ENST00000338910 GGA2Q9UJY4 613 aa20.57■□□□□ 0.88
PSPC1-201ENST00000338910 CEP83Q9Y592 693 aa20.57■□□□□ 0.88
PSPC1-201ENST00000338910 GJA3Q9Y6H8 435 aa20.57■□□□□ 0.88
PSPC1-201ENST00000338910 BICDL2A1A5D9 508 aa20.56■□□□□ 0.88
PSPC1-201ENST00000338910 OPLAHO14841 1288 aa20.56■□□□□ 0.88
PSPC1-201ENST00000338910 CHUKO15111 745 aa20.56■□□□□ 0.88
PSPC1-201ENST00000338910 CAP2P40123 477 aa20.56■□□□□ 0.88
PSPC1-201ENST00000338910 CARSP49589 748 aaKnown RBP20.56■□□□□ 0.88
PSPC1-201ENST00000338910 FKBP15Q5T1M5 1219 aa20.56■□□□□ 0.88
PSPC1-201ENST00000338910 SAMD7Q7Z3H4 446 aa20.56■□□□□ 0.88
PSPC1-201ENST00000338910 CCDC84Q86UT8 332 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms