RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 UBE4AQ14139 1066 aa17.73■□□□□ 0.43
UPK3B-202ENST00000334348 ENOX2Q16206 610 aaKnown RBP17.73■□□□□ 0.43
UPK3B-202ENST00000334348 TPCN2Q8NHX9 752 aa17.73■□□□□ 0.43
UPK3B-202ENST00000334348 GOLPH3Q9H4A6 298 aa17.73■□□□□ 0.43
UPK3B-202ENST00000334348 PNMA2Q9UL42 364 aa17.73■□□□□ 0.43
UPK3B-202ENST00000334348 FRMD3A2A2Y4 597 aa17.73■□□□□ 0.43
UPK3B-202ENST00000334348 SMCO2A6NFE2 343 aa17.73■□□□□ 0.43
UPK3B-202ENST00000334348 MECOMQ03112 1051 aa17.73■□□□□ 0.43
UPK3B-202ENST00000334348 PTK2Q05397 1052 aa17.73■□□□□ 0.43
UPK3B-202ENST00000334348 IRF2BP2Q7Z5L9 587 aa17.73■□□□□ 0.43
UPK3B-202ENST00000334348 SLFN11Q7Z7L1 901 aa17.73■□□□□ 0.43
UPK3B-202ENST00000334348 TBCKQ8TEA7 893 aa17.73■□□□□ 0.43
UPK3B-202ENST00000334348 STAMBPL1Q96FJ0 436 aa17.73■□□□□ 0.43
UPK3B-202ENST00000334348 SUCLA2Q9P2R7 463 aaPredicted RBP17.73■□□□□ 0.43
UPK3B-202ENST00000334348 STXBP5LQ9Y2K9 1186 aa17.73■□□□□ 0.43
UPK3B-202ENST00000334348 BZW2Q9Y6E2 419 aaKnown RBP17.73■□□□□ 0.43
UPK3B-202ENST00000334348 CAND2O75155 1236 aa17.72■□□□□ 0.43
UPK3B-202ENST00000334348 CHN1P15882 459 aa17.72■□□□□ 0.43
UPK3B-202ENST00000334348 ZNF571Q7Z3V5 609 aaPredicted RBP17.72■□□□□ 0.43
UPK3B-202ENST00000334348 NSMCE1Q8WV22 266 aa17.72■□□□□ 0.43
UPK3B-202ENST00000334348 LMBR1Q8WVP7 490 aa17.72■□□□□ 0.43
UPK3B-202ENST00000334348 ATXN2LQ8WWM7 1075 aaKnown RBP17.72■□□□□ 0.43
UPK3B-202ENST00000334348 KIF3CO14782 793 aa17.72■□□□□ 0.43
UPK3B-202ENST00000334348 APBA3O96018 575 aa17.72■□□□□ 0.43
UPK3B-202ENST00000334348 MMEP08473 750 aa17.72■□□□□ 0.43
UPK3B-202ENST00000334348 MMP13P45452 471 aa17.72■□□□□ 0.43
UPK3B-202ENST00000334348 IRX1P78414 480 aaPredicted RBP17.72■□□□□ 0.43
UPK3B-202ENST00000334348 POU5F1Q01860 360 aaKnown RBP17.72■□□□□ 0.43
UPK3B-202ENST00000334348 SEPT2Q15019 361 aa17.72■□□□□ 0.43
UPK3B-202ENST00000334348 PEX26Q7Z412 305 aa17.72■□□□□ 0.43
UPK3B-202ENST00000334348 DEFB132Q7Z7B7 95 aa17.72■□□□□ 0.43
UPK3B-202ENST00000334348 TCP11Q8WWU5 503 aa17.72■□□□□ 0.43
UPK3B-202ENST00000334348 FMO2Q99518 471 aa17.72■□□□□ 0.43
UPK3B-202ENST00000334348 NAGPAQ9UK23 515 aa17.72■□□□□ 0.43
UPK3B-202ENST00000334348 ATP8A1Q9Y2Q0 1164 aa17.72■□□□□ 0.43
UPK3B-202ENST00000334348 C15orf41Q9Y2V0 281 aa17.72■□□□□ 0.43
UPK3B-202ENST00000334348 BTAF1O14981 1849 aa17.71■□□□□ 0.43
UPK3B-202ENST00000334348 ATP8B3O60423 1300 aa17.71■□□□□ 0.43
UPK3B-202ENST00000334348 NUDT17P0C025 328 aa17.71■□□□□ 0.43
UPK3B-202ENST00000334348 COASYQ13057 564 aa17.71■□□□□ 0.43
UPK3B-202ENST00000334348 ZNF268Q14587 947 aaPredicted RBP17.71■□□□□ 0.43
UPK3B-202ENST00000334348 SLMAPQ14BN4 828 aa17.71■□□□□ 0.43
UPK3B-202ENST00000334348 ZKSCAN8Q15776 578 aaPredicted RBP17.71■□□□□ 0.43
UPK3B-202ENST00000334348 CALCRLQ16602 461 aa17.71■□□□□ 0.43
UPK3B-202ENST00000334348 TMEM266Q2M3C6 531 aa17.71■□□□□ 0.43
UPK3B-202ENST00000334348 KIRREL3Q8IZU9 778 aa17.71■□□□□ 0.43
UPK3B-202ENST00000334348 PGM2Q96G03 612 aa17.71■□□□□ 0.43
UPK3B-202ENST00000334348 SPZ1Q9BXG8 430 aa17.71■□□□□ 0.43
UPK3B-202ENST00000334348 DPH5Q9H2P9 285 aa17.71■□□□□ 0.43
UPK3B-202ENST00000334348 UTRNP46939 3433 aa17.71■□□□□ 0.43
UPK3B-202ENST00000334348 WTIPA6NIX2 430 aaPredicted RBP17.71■□□□□ 0.42
UPK3B-202ENST00000334348 CALRP27797 417 aaKnown RBP17.71■□□□□ 0.42
UPK3B-202ENST00000334348 MYO1EQ12965 1108 aa17.71■□□□□ 0.42
UPK3B-202ENST00000334348 PDIA5Q14554 519 aa17.71■□□□□ 0.42
UPK3B-202ENST00000334348 TMEM119Q4V9L6 283 aa17.71■□□□□ 0.42
UPK3B-202ENST00000334348 ALKBH5Q6P6C2 394 aaKnown RBP17.71■□□□□ 0.42
UPK3B-202ENST00000334348 FAM84BQ96KN1 310 aaPredicted RBP17.71■□□□□ 0.42
UPK3B-202ENST00000334348 CELF4Q9BZC1 486 aaKnown RBP17.71■□□□□ 0.42
UPK3B-202ENST00000334348 CCDC134Q9H6E4 229 aa17.71■□□□□ 0.42
UPK3B-202ENST00000334348 MCM9Q9NXL9 1143 aa17.71■□□□□ 0.42
UPK3B-202ENST00000334348 SAMD15Q9P1V8 674 aa17.71■□□□□ 0.42
UPK3B-202ENST00000334348 LAMB1P07942 1786 aa17.7■□□□□ 0.42
UPK3B-202ENST00000334348 ANP32DO95626 131 aa17.7■□□□□ 0.42
UPK3B-202ENST00000334348 CLTAP09496 248 aa17.7■□□□□ 0.42
UPK3B-202ENST00000334348 PARP10Q53GL7 1025 aa17.7■□□□□ 0.42
UPK3B-202ENST00000334348 TRPM8Q7Z2W7 1104 aa17.7■□□□□ 0.42
UPK3B-202ENST00000334348 SYCE1Q8N0S2 351 aa17.7■□□□□ 0.42
UPK3B-202ENST00000334348 ATP8B4Q8TF62 1192 aa17.7■□□□□ 0.42
UPK3B-202ENST00000334348 DNAJC19Q96DA6 116 aa17.7■□□□□ 0.42
UPK3B-202ENST00000334348 RAB34Q9BZG1 259 aa17.7■□□□□ 0.42
UPK3B-202ENST00000334348 RAB17Q9H0T7 212 aa17.7■□□□□ 0.42
UPK3B-202ENST00000334348 ADAM7Q9H2U9 754 aa17.7■□□□□ 0.42
UPK3B-202ENST00000334348 KCNMB3Q9NPA1 279 aa17.7■□□□□ 0.42
UPK3B-202ENST00000334348 TTC7AQ9ULT0 858 aaPredicted RBP17.7■□□□□ 0.42
UPK3B-202ENST00000334348 A0A0A6YYK5 440 aaPredicted RBP17.69■□□□□ 0.42
UPK3B-202ENST00000334348 KLRF2D3W0D1 207 aa17.69■□□□□ 0.42
UPK3B-202ENST00000334348 ANXA13P27216 316 aa17.69■□□□□ 0.42
UPK3B-202ENST00000334348 FAM26FQ5R3K3 315 aa17.69■□□□□ 0.42
UPK3B-202ENST00000334348 KRT79Q5XKE5 535 aa17.69■□□□□ 0.42
UPK3B-202ENST00000334348 KCNK18Q7Z418 384 aa17.69■□□□□ 0.42
UPK3B-202ENST00000334348 PNMA8AQ86V59 439 aaPredicted RBP17.69■□□□□ 0.42
UPK3B-202ENST00000334348 LRRC34Q8IZ02 419 aa17.69■□□□□ 0.42
UPK3B-202ENST00000334348 L3MBTL3Q96JM7 780 aaPredicted RBP17.69■□□□□ 0.42
UPK3B-202ENST00000334348 EPB41L4BQ9H329 900 aa17.69■□□□□ 0.42
UPK3B-202ENST00000334348 NHSQ6T4R5 1651 aa17.69■□□□□ 0.42
UPK3B-202ENST00000334348 MYH7BA7E2Y1 1941 aa17.69■□□□□ 0.42
UPK3B-202ENST00000334348 USP17L3A6NCW0 530 aa17.69■□□□□ 0.42
UPK3B-202ENST00000334348 USP17L4A6NCW7 530 aa17.69■□□□□ 0.42
UPK3B-202ENST00000334348 USP17L8P0C7I0 530 aa17.69■□□□□ 0.42
UPK3B-202ENST00000334348 ALADP13716 330 aa17.69■□□□□ 0.42
UPK3B-202ENST00000334348 EPS15P42566 896 aa17.69■□□□□ 0.42
UPK3B-202ENST00000334348 EN1Q05925 392 aaPredicted RBP17.69■□□□□ 0.42
UPK3B-202ENST00000334348 GRIK3Q13003 919 aa17.69■□□□□ 0.42
UPK3B-202ENST00000334348 PTPROQ16827 1216 aa17.69■□□□□ 0.42
UPK3B-202ENST00000334348 SOGA3Q5TF21 947 aa17.69■□□□□ 0.42
UPK3B-202ENST00000334348 C12orf60Q5U649 245 aa17.69■□□□□ 0.42
UPK3B-202ENST00000334348 SMIM5Q71RC9 77 aa17.69■□□□□ 0.42
UPK3B-202ENST00000334348 USP17L1Q7RTZ2 530 aa17.69■□□□□ 0.42
UPK3B-202ENST00000334348 TBC1D1Q86TI0 1168 aaPredicted RBP17.69■□□□□ 0.42
UPK3B-202ENST00000334348 NT5DC3Q86UY8 548 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms