RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 SPDYE7PQ495Y7 208 aa17.57■□□□□ 0.4
PTCH1-201ENST00000331920 PLD3Q8IV08 490 aa17.57■□□□□ 0.4
PTCH1-201ENST00000331920 VMP1Q96GC9 406 aa17.57■□□□□ 0.4
PTCH1-201ENST00000331920 MEIS1O00470 390 aa17.57■□□□□ 0.4
PTCH1-201ENST00000331920 MTHFSDQ2M296 383 aaKnown RBP17.57■□□□□ 0.4
PTCH1-201ENST00000331920 FAM167BQ9BTA0 163 aa17.57■□□□□ 0.4
PTCH1-201ENST00000331920 ZC3H15Q8WU90 426 aaKnown RBP17.57■□□□□ 0.4
PTCH1-201ENST00000331920 ARHGAP45Q92619 1136 aa17.57■□□□□ 0.4
PTCH1-201ENST00000331920 PAPOLBQ9NRJ5 636 aaKnown RBP17.57■□□□□ 0.4
PTCH1-201ENST00000331920 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.57■□□□□ 0.4
PTCH1-201ENST00000331920 JRKLQ9Y4A0 524 aa17.57■□□□□ 0.4
PTCH1-201ENST00000331920 SOX11P35716 441 aa17.57■□□□□ 0.4
PTCH1-201ENST00000331920 PSMC2P35998 433 aaKnown RBP17.57■□□□□ 0.4
PTCH1-201ENST00000331920 KRT26Q7Z3Y9 468 aa17.57■□□□□ 0.4
PTCH1-201ENST00000331920 TMEM245Q9H330 911 aa17.57■□□□□ 0.4
PTCH1-201ENST00000331920 HEY1Q9Y5J3 304 aa17.57■□□□□ 0.4
PTCH1-201ENST00000331920 UBA6A0AVT1 1052 aaPredicted RBP17.56■□□□□ 0.4
PTCH1-201ENST00000331920 KIAA0825Q8IV33 1275 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 TEX2Q8IWB9 1127 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 TRIM11Q96F44 468 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 NLRP4Q96MN2 994 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 FAM47EQ6ZV65 393 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 RASSF3Q86WH2 238 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 PPP1R13BQ96KQ4 1090 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 PITPNM3Q9BZ71 974 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 PCDHA5Q9Y5H7 936 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 ARHGAP10A1A4S6 786 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 APOA4P06727 396 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 PSMA2P25787 234 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 MED21Q13503 144 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 ALS2CLQ60I27 953 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 KCTD1Q719H9 257 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 CENPUQ71F23 418 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 MLXIPLQ9NP71 852 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 PPIP5K1Q6PFW1 1433 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 ERFP50548 548 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 LRRC41Q15345 812 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 CCNYL1Q8N7R7 359 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 SLC13A1Q9BZW2 595 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 VPS11Q9H270 941 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 BTG4Q9NY30 223 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 DMRT2Q9Y5R5 561 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 H0Y626 953 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 TRIM16O95361 564 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 ATXN7L3BQ96GX2 97 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 VPS39Q96JC1 886 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 A0A1B0GW55 424 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 COPEO14579 308 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 DUX4L2P0CJ85 424 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 DUX4L3P0CJ86 424 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 DUX4L4P0CJ87 422 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 DUX4L5P0CJ88 424 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 DUX4L6P0CJ89 424 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 DUX4L7P0CJ90 424 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 CASP14P31944 242 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 MRPS25P82663 173 aaKnown RBP17.56■□□□□ 0.4
PTCH1-201ENST00000331920 INPP5DQ92835 1189 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 NDEL1Q9GZM8 345 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 KDM4CQ9H3R0 1056 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 DUX4Q9UBX2 424 aa17.56■□□□□ 0.4
PTCH1-201ENST00000331920 NPM3O75607 178 aaKnown RBP17.55■□□□□ 0.4
PTCH1-201ENST00000331920 GRK2P25098 689 aa17.55■□□□□ 0.4
PTCH1-201ENST00000331920 EPHB4P54760 987 aa17.55■□□□□ 0.4
PTCH1-201ENST00000331920 AP2B1P63010 937 aa17.55■□□□□ 0.4
PTCH1-201ENST00000331920 CYTH1Q15438 398 aa17.55■□□□□ 0.4
PTCH1-201ENST00000331920 CCDC87Q9NVE4 849 aa17.55■□□□□ 0.4
PTCH1-201ENST00000331920 DCTN4Q9UJW0 460 aa17.55■□□□□ 0.4
PTCH1-201ENST00000331920 MLH1P40692 756 aa17.55■□□□□ 0.4
PTCH1-201ENST00000331920 TADA2BQ86TJ2 420 aa17.55■□□□□ 0.4
PTCH1-201ENST00000331920 BTBD6Q96KE9 485 aa17.55■□□□□ 0.4
PTCH1-201ENST00000331920 ZFP69BQ9UJL9 534 aa17.55■□□□□ 0.4
PTCH1-201ENST00000331920 MAP3K5Q99683 1374 aa17.55■□□□□ 0.4
PTCH1-201ENST00000331920 SH3GL2Q99962 352 aa17.55■□□□□ 0.4
PTCH1-201ENST00000331920 TUBGCP2Q9BSJ2 902 aa17.55■□□□□ 0.4
PTCH1-201ENST00000331920 TTC8Q8TAM2 541 aa17.55■□□□□ 0.4
PTCH1-201ENST00000331920 PCDH11XQ9BZA7 1347 aa17.55■□□□□ 0.4
PTCH1-201ENST00000331920 PCDH11YQ9BZA8 1340 aa17.55■□□□□ 0.4
PTCH1-201ENST00000331920 PDCLQ13371 301 aa17.55■□□□□ 0.4
PTCH1-201ENST00000331920 TNFAIP1Q13829 316 aa17.55■□□□□ 0.4
PTCH1-201ENST00000331920 SPDYAQ5MJ70 313 aa17.55■□□□□ 0.4
PTCH1-201ENST00000331920 TTLL7Q6ZT98 887 aa17.55■□□□□ 0.4
PTCH1-201ENST00000331920 PTGDRQ13258 359 aa17.55■□□□□ 0.4
PTCH1-201ENST00000331920 PKN3Q6P5Z2 889 aa17.55■□□□□ 0.4
PTCH1-201ENST00000331920 RNPEPQ9H4A4 650 aa17.55■□□□□ 0.4
PTCH1-201ENST00000331920 MRPL47Q9HD33 250 aaKnown RBP17.55■□□□□ 0.4
PTCH1-201ENST00000331920 TMEM232C9JQI7 657 aa17.55■□□□□ 0.4
PTCH1-201ENST00000331920 EYA2O00167 538 aa17.55■□□□□ 0.4
PTCH1-201ENST00000331920 MDH1BQ5I0G3 518 aa17.55■□□□□ 0.4
PTCH1-201ENST00000331920 SH3BP5LQ7L8J4 393 aa17.55■□□□□ 0.4
PTCH1-201ENST00000331920 TRIM69Q86WT6 500 aa17.55■□□□□ 0.4
PTCH1-201ENST00000331920 LRRC53A6NM62 1247 aa17.54■□□□□ 0.4
PTCH1-201ENST00000331920 DR1Q01658 176 aa17.54■□□□□ 0.4
PTCH1-201ENST00000331920 SLC7A3Q8WY07 619 aa17.54■□□□□ 0.4
PTCH1-201ENST00000331920 KLRF2D3W0D1 207 aa17.54■□□□□ 0.4
PTCH1-201ENST00000331920 PGRMC1O00264 195 aaKnown RBP17.54■□□□□ 0.4
PTCH1-201ENST00000331920 SERPINB10P48595 397 aa17.54■□□□□ 0.4
PTCH1-201ENST00000331920 NDUFA8P51970 172 aa17.54■□□□□ 0.4
PTCH1-201ENST00000331920 ADCK5Q3MIX3 580 aa17.54■□□□□ 0.4
PTCH1-201ENST00000331920 SCN4BQ8IWT1 228 aa17.54■□□□□ 0.4
PTCH1-201ENST00000331920 AGBL1Q96MI9 1066 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms