RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 PIK3AP1Q6ZUJ8 805 aa31.22■■■□□ 2.59
ATPAF1-201ENST00000329231 NEK8Q86SG6 692 aa31.22■■■□□ 2.59
ATPAF1-201ENST00000329231 HERC6Q8IVU3 1022 aa31.22■■■□□ 2.59
ATPAF1-201ENST00000329231 SEPT8Q92599 483 aa31.22■■■□□ 2.59
ATPAF1-201ENST00000329231 DISC1Q9NRI5 854 aa31.22■■■□□ 2.59
ATPAF1-201ENST00000329231 DDX25Q9UHL0 483 aaKnown RBP31.22■■■□□ 2.59
ATPAF1-201ENST00000329231 PCDHA2Q9Y5H9 948 aa31.22■■■□□ 2.59
ATPAF1-201ENST00000329231 SFNP31947 248 aa31.21■■■□□ 2.59
ATPAF1-201ENST00000329231 ST3GAL1Q11201 340 aa31.21■■■□□ 2.59
ATPAF1-201ENST00000329231 TRIM29Q14134 588 aa31.21■■■□□ 2.59
ATPAF1-201ENST00000329231 GRIN2CQ14957 1233 aa31.21■■■□□ 2.59
ATPAF1-201ENST00000329231 TRAPPC12Q8WVT3 735 aa31.21■■■□□ 2.59
ATPAF1-201ENST00000329231 NAP1L4Q99733 375 aaKnown RBP31.21■■■□□ 2.59
ATPAF1-201ENST00000329231 GABBR1Q9UBS5 961 aa31.21■■■□□ 2.59
ATPAF1-201ENST00000329231 COL1A2P08123 1366 aa31.2■■■□□ 2.59
ATPAF1-201ENST00000329231 PSMD10O75832 226 aa31.2■■■□□ 2.59
ATPAF1-201ENST00000329231 CHRNA1P02708 482 aa31.2■■■□□ 2.59
ATPAF1-201ENST00000329231 GCFC2P16383 781 aaKnown RBP31.2■■■□□ 2.59
ATPAF1-201ENST00000329231 JAK3P52333 1124 aa31.2■■■□□ 2.59
ATPAF1-201ENST00000329231 ZNF484Q5JVG2 852 aa31.2■■■□□ 2.59
ATPAF1-201ENST00000329231 CCDC83Q8IWF9 413 aa31.2■■■□□ 2.59
ATPAF1-201ENST00000329231 BBXQ8WY36 941 aaPredicted RBP31.2■■■□□ 2.59
ATPAF1-201ENST00000329231 FAM49AQ9H0Q0 323 aaPredicted RBP31.2■■■□□ 2.59
ATPAF1-201ENST00000329231 SH2B1Q9NRF2 756 aaPredicted RBP31.2■■■□□ 2.59
ATPAF1-201ENST00000329231 MYOGP15173 224 aa31.19■■■□□ 2.58
ATPAF1-201ENST00000329231 PPP4R3AQ6IN85 833 aa31.19■■■□□ 2.58
ATPAF1-201ENST00000329231 MTHFD1LQ6UB35 978 aa31.19■■■□□ 2.58
ATPAF1-201ENST00000329231 ETNPPLQ8TBG4 499 aa31.19■■■□□ 2.58
ATPAF1-201ENST00000329231 MYLIPQ8WY64 445 aa31.19■■■□□ 2.58
ATPAF1-201ENST00000329231 GJA10Q969M2 543 aa31.19■■■□□ 2.58
ATPAF1-201ENST00000329231 ZBTB10Q96DT7 871 aa31.19■■■□□ 2.58
ATPAF1-201ENST00000329231 LLPHQ9BRT6 129 aaKnown RBP31.19■■■□□ 2.58
ATPAF1-201ENST00000329231 UNC45AQ9H3U1 944 aa31.19■■■□□ 2.58
ATPAF1-201ENST00000329231 CHMP2AO43633 222 aa31.18■■■□□ 2.58
ATPAF1-201ENST00000329231 ATP4AP20648 1035 aa31.18■■■□□ 2.58
ATPAF1-201ENST00000329231 MGAT3Q09327 533 aa31.18■■■□□ 2.58
ATPAF1-201ENST00000329231 RABEP1Q15276 862 aa31.18■■■□□ 2.58
ATPAF1-201ENST00000329231 IER5Q5VY09 327 aa31.18■■■□□ 2.58
ATPAF1-201ENST00000329231 PPP2R2DQ66LE6 453 aa31.18■■■□□ 2.58
ATPAF1-201ENST00000329231 RDM1Q8NG50 284 aa31.18■■■□□ 2.58
ATPAF1-201ENST00000329231 APBB2Q92870 758 aa31.18■■■□□ 2.58
ATPAF1-201ENST00000329231 FAM167AQ96KS9 214 aa31.18■■■□□ 2.58
ATPAF1-201ENST00000329231 SMIM35A0A1B0GVV1 85 aa31.17■■■□□ 2.58
ATPAF1-201ENST00000329231 MMP1P03956 469 aa31.17■■■□□ 2.58
ATPAF1-201ENST00000329231 KLRC1P26715 233 aa31.17■■■□□ 2.58
ATPAF1-201ENST00000329231 DEFB103AP81534 67 aa31.17■■■□□ 2.58
ATPAF1-201ENST00000329231 MRPS6P82932 125 aaKnown RBP31.17■■■□□ 2.58
ATPAF1-201ENST00000329231 NR5A1Q13285 461 aa31.17■■■□□ 2.58
ATPAF1-201ENST00000329231 NME8Q8N427 588 aa31.17■■■□□ 2.58
ATPAF1-201ENST00000329231 ZBED2Q9BTP6 218 aa31.17■■■□□ 2.58
ATPAF1-201ENST00000329231 CDY2AQ9Y6F7 541 aa31.17■■■□□ 2.58
ATPAF1-201ENST00000329231 IGSF9BQ9UPX0 1349 aa31.17■■■□□ 2.58
ATPAF1-201ENST00000329231 M0QZ92 97 aa31.16■■■□□ 2.58
ATPAF1-201ENST00000329231 SLC37A4O43826 429 aa31.16■■■□□ 2.58
ATPAF1-201ENST00000329231 TLL1O43897 1013 aa31.16■■■□□ 2.58
ATPAF1-201ENST00000329231 CCNT1O60563 726 aaKnown RBP31.16■■■□□ 2.58
ATPAF1-201ENST00000329231 KRT40Q6A162 431 aa31.16■■■□□ 2.58
ATPAF1-201ENST00000329231 MIER3Q7Z3K6 550 aa31.16■■■□□ 2.58
ATPAF1-201ENST00000329231 IL27Q8NEV9 243 aa31.16■■■□□ 2.58
ATPAF1-201ENST00000329231 FAM20AQ96MK3 541 aa31.16■■■□□ 2.58
ATPAF1-201ENST00000329231 IFIH1Q9BYX4 1025 aaKnown RBP31.16■■■□□ 2.58
ATPAF1-201ENST00000329231 OSBPL7Q9BZF2 842 aa31.16■■■□□ 2.58
ATPAF1-201ENST00000329231 CEP131Q9UPN4 1083 aa31.16■■■□□ 2.58
ATPAF1-201ENST00000329231 GBF1Q92538 1859 aa31.15■■■□□ 2.58
ATPAF1-201ENST00000329231 AMHP03971 560 aa31.15■■■□□ 2.58
ATPAF1-201ENST00000329231 CA3P07451 260 aa31.15■■■□□ 2.58
ATPAF1-201ENST00000329231 GHRP10912 638 aa31.15■■■□□ 2.58
ATPAF1-201ENST00000329231 FOSL2P15408 326 aa31.15■■■□□ 2.58
ATPAF1-201ENST00000329231 FOSBP53539 338 aa31.15■■■□□ 2.58
ATPAF1-201ENST00000329231 TRMT1LQ7Z2T5 733 aaKnown RBP31.15■■■□□ 2.58
ATPAF1-201ENST00000329231 TNFRSF25Q93038 417 aa31.15■■■□□ 2.58
ATPAF1-201ENST00000329231 ZBTB42B2RXF5 422 aa31.14■■■□□ 2.58
ATPAF1-201ENST00000329231 MKRN4PQ13434 485 aaPredicted RBP31.14■■■□□ 2.58
ATPAF1-201ENST00000329231 EARS2Q5JPH6 523 aaKnown RBP31.14■■■□□ 2.58
ATPAF1-201ENST00000329231 DIS3L2Q8IYB7 885 aaKnown RBP31.14■■■□□ 2.58
ATPAF1-201ENST00000329231 KCNMB3Q9NPA1 279 aa31.14■■■□□ 2.58
ATPAF1-201ENST00000329231 NRBP2Q9NSY0 501 aa31.14■■■□□ 2.58
ATPAF1-201ENST00000329231 BTBD18B2RXH4 712 aa31.13■■■□□ 2.57
ATPAF1-201ENST00000329231 ST18O60284 1047 aa31.13■■■□□ 2.57
ATPAF1-201ENST00000329231 GJB5O95377 273 aa31.13■■■□□ 2.57
ATPAF1-201ENST00000329231 HMGN5P82970 282 aaKnown RBP31.13■■■□□ 2.57
ATPAF1-201ENST00000329231 LPIN1Q14693 890 aa31.13■■■□□ 2.57
ATPAF1-201ENST00000329231 FBXO47Q5MNV8 452 aa31.13■■■□□ 2.57
ATPAF1-201ENST00000329231 B3GNT9Q6UX72 402 aa31.13■■■□□ 2.57
ATPAF1-201ENST00000329231 LIN28BQ6ZN17 250 aaKnown RBP eCLIP31.13■■■□□ 2.57
ATPAF1-201ENST00000329231 TRPV2Q9Y5S1 764 aa31.13■■■□□ 2.57
ATPAF1-201ENST00000329231 SQORQ9Y6N5 450 aa31.13■■■□□ 2.57
ATPAF1-201ENST00000329231 MYH9P35579 1960 aaKnown RBP31.12■■■□□ 2.57
ATPAF1-201ENST00000329231 TBX3O15119 743 aa31.12■■■□□ 2.57
ATPAF1-201ENST00000329231 MARCH6O60337 910 aa31.12■■■□□ 2.57
ATPAF1-201ENST00000329231 OATP04181 439 aa31.12■■■□□ 2.57
ATPAF1-201ENST00000329231 SAFBQ15424 915 aaKnown RBP eCLIP31.12■■■□□ 2.57
ATPAF1-201ENST00000329231 TSHZ1Q6ZSZ6 1077 aa31.12■■■□□ 2.57
ATPAF1-201ENST00000329231 TMCO2Q7Z6W1 182 aaPredicted RBP31.12■■■□□ 2.57
ATPAF1-201ENST00000329231 GAS2L1Q99501 681 aaPredicted RBP31.12■■■□□ 2.57
ATPAF1-201ENST00000329231 PRDM12Q9H4Q4 367 aa31.12■■■□□ 2.57
ATPAF1-201ENST00000329231 FAM205CA6NFA0 338 aa31.11■■■□□ 2.57
ATPAF1-201ENST00000329231 RBAK-RBAKDNI3L0D1 243 aa31.11■■■□□ 2.57
ATPAF1-201ENST00000329231 ZNF862O60290 1169 aa31.11■■■□□ 2.57
ATPAF1-201ENST00000329231 C22orf31O95567 290 aa31.11■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms