RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 RNF187Q5TA31 235 aaPredicted RBP11.35□□□□□ -0.59
ABCF1-201ENST00000326195 TRAPPC11Q7Z392 1133 aa11.35□□□□□ -0.59
ABCF1-201ENST00000326195 CCDC13Q8IYE1 715 aa11.35□□□□□ -0.59
ABCF1-201ENST00000326195 SMYD4Q8IYR2 804 aaPredicted RBP11.35□□□□□ -0.59
ABCF1-201ENST00000326195 TRIML1Q8N9V2 468 aa11.35□□□□□ -0.59
ABCF1-201ENST00000326195 SYMPKQ92797 1274 aaKnown RBP11.35□□□□□ -0.59
ABCF1-201ENST00000326195 CUL5Q93034 780 aa11.35□□□□□ -0.59
ABCF1-201ENST00000326195 FERMT2Q96AC1 680 aa11.35□□□□□ -0.59
ABCF1-201ENST00000326195 VPS16Q9H269 839 aa11.35□□□□□ -0.59
ABCF1-201ENST00000326195 FEM1BQ9UK73 627 aa11.35□□□□□ -0.59
ABCF1-201ENST00000326195 REXO2Q9Y3B8 237 aaKnown RBP11.35□□□□□ -0.59
ABCF1-201ENST00000326195 DDX60LQ5H9U9 1706 aaKnown RBP11.35□□□□□ -0.59
ABCF1-201ENST00000326195 TESPA1A2RU30 521 aaPredicted RBP11.35□□□□□ -0.59
ABCF1-201ENST00000326195 C19orf81C9J6K1 198 aa11.35□□□□□ -0.59
ABCF1-201ENST00000326195 STXBP3O00186 592 aa11.35□□□□□ -0.59
ABCF1-201ENST00000326195 MFAP3LO75121 409 aa11.35□□□□□ -0.59
ABCF1-201ENST00000326195 ERCC3P19447 782 aa11.35□□□□□ -0.59
ABCF1-201ENST00000326195 CASP1P29466 404 aa11.35□□□□□ -0.59
ABCF1-201ENST00000326195 PTGDRQ13258 359 aa11.35□□□□□ -0.59
ABCF1-201ENST00000326195 TSEN2Q8NCE0 465 aaKnown RBP11.35□□□□□ -0.59
ABCF1-201ENST00000326195 CALR3Q96L12 384 aaKnown RBP11.35□□□□□ -0.59
ABCF1-201ENST00000326195 SLC40A1Q9NP59 571 aa11.35□□□□□ -0.59
ABCF1-201ENST00000326195 HOXC10Q9NYD6 342 aa11.35□□□□□ -0.59
ABCF1-201ENST00000326195 CTNND2Q9UQB3 1225 aa11.35□□□□□ -0.59
ABCF1-201ENST00000326195 CETPP11597 493 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 GUCY1A3Q02108 690 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 PPIL2Q13356 520 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 CCDC40Q4G0X9 1142 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 USP49Q70CQ1 688 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 ENOX1Q8TC92 643 aaKnown RBP11.34□□□□□ -0.59
ABCF1-201ENST00000326195 TBCKQ8TEA7 893 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 CHP1Q99653 195 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 ECM29Q5VYK3 1845 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 CYP2B6P20813 491 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 OSBPP22059 807 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 GTF2A2P52657 109 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 APBA1Q02410 837 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 PRR16Q569H4 304 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 CATSPERGQ6ZRH7 1159 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 SND1Q7KZF4 910 aaKnown RBP eCLIP11.34□□□□□ -0.59
ABCF1-201ENST00000326195 GMCL1P1Q8NEA9 526 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 RBM46Q8TBY0 533 aaKnown RBP11.34□□□□□ -0.59
ABCF1-201ENST00000326195 MAP3K14Q99558 947 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 BMP2KQ9NSY1 1161 aaPredicted RBP11.34□□□□□ -0.59
ABCF1-201ENST00000326195 PBX1P40424 430 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 TXKP42681 527 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 VEGFBP49765 207 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 MRPL12P52815 198 aaKnown RBP11.34□□□□□ -0.59
ABCF1-201ENST00000326195 RPS6P62753 249 aaKnown RBP11.34□□□□□ -0.59
ABCF1-201ENST00000326195 TUBB2AQ13885 445 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 CEP85LQ5SZL2 805 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 ZNF483Q8TF39 744 aaPredicted RBP11.34□□□□□ -0.59
ABCF1-201ENST00000326195 ANKS1AQ92625 1134 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 LPAR1Q92633 364 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 GMCL1Q96IK5 515 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 SH2D3AQ9BRG2 576 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 PYM1Q9BRP8 204 aaKnown RBP11.34□□□□□ -0.59
ABCF1-201ENST00000326195 WDR18Q9BV38 432 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 TUBB2BQ9BVA1 445 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 TRIM6Q9C030 488 aaPredicted RBP11.34□□□□□ -0.59
ABCF1-201ENST00000326195 BARHL2Q9NY43 387 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 FBXO2Q9UK22 296 aaPredicted RBP11.34□□□□□ -0.59
ABCF1-201ENST00000326195 IVNS1ABPQ9Y6Y0 642 aa11.34□□□□□ -0.59
ABCF1-201ENST00000326195 KIAA0754O94854 1291 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 TDP2O95551 362 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 TUBB4BP68371 445 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 MAP3K10Q02779 954 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 C2orf54Q08AI8 447 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 IFT88Q13099 833 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 NAA35Q5VZE5 725 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 FASTKD5Q7L8L6 764 aaKnown RBP11.33□□□□□ -0.6
ABCF1-201ENST00000326195 RASAL3Q86YV0 1011 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 TAAR1Q96RJ0 339 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 ZNHIT6Q9NWK9 470 aaKnown RBP11.33□□□□□ -0.6
ABCF1-201ENST00000326195 CEP290O15078 2479 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 OPLAHO14841 1288 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 TUBBP07437 444 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 SMTNP53814 917 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 CLNS1AP54105 237 aaKnown RBP11.33□□□□□ -0.6
ABCF1-201ENST00000326195 NAP1L1P55209 391 aaKnown RBP11.33□□□□□ -0.6
ABCF1-201ENST00000326195 SPAG1Q07617 926 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 SEMA3FQ13275 785 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 TLDC1Q6P9B6 456 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 SEPT14Q6ZU15 432 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 RIOX1Q9H6W3 641 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 RMND1Q9NWS8 449 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 KRT14P02533 472 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 CD44P16070 742 aaKnown RBP11.33□□□□□ -0.6
ABCF1-201ENST00000326195 DSG3P32926 999 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 FSTL1Q12841 308 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 ACCSLQ4AC99 568 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 SPATA1Q5VX52 437 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 RNF207Q6ZRF8 634 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 DPP9Q86TI2 863 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 AENQ8WTP8 325 aaKnown RBP11.33□□□□□ -0.6
ABCF1-201ENST00000326195 CDK5RAP3Q96JB5 506 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 RNPC3Q96LT9 517 aaKnown RBP11.33□□□□□ -0.6
ABCF1-201ENST00000326195 SPZ1Q9BXG8 430 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 ARHGAP39Q9C0H5 1083 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 DMGDHQ9UI17 866 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms