RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 PDHXO00330 501 aa15.67■□□□□ 0.1
VRK3-201ENST00000316763 KRT86O43790 486 aa15.67■□□□□ 0.1
VRK3-201ENST00000316763 CDK17Q00537 523 aa15.67■□□□□ 0.1
VRK3-201ENST00000316763 TMEM132BQ14DG7 1078 aa15.67■□□□□ 0.1
VRK3-201ENST00000316763 BRD3Q15059 726 aa15.67■□□□□ 0.1
VRK3-201ENST00000316763 Q4G0T1 1027 aa15.67■□□□□ 0.1
VRK3-201ENST00000316763 VWA3BQ502W6 1294 aa15.67■□□□□ 0.1
VRK3-201ENST00000316763 MUM1L1Q5H9M0 696 aa15.67■□□□□ 0.1
VRK3-201ENST00000316763 CC2D1AQ6P1N0 951 aaPredicted RBP15.67■□□□□ 0.1
VRK3-201ENST00000316763 WDR59Q6PJI9 974 aa15.67■□□□□ 0.1
VRK3-201ENST00000316763 LENG9Q96B70 501 aa15.67■□□□□ 0.1
VRK3-201ENST00000316763 ASCC2Q9H1I8 757 aaPredicted RBP15.67■□□□□ 0.1
VRK3-201ENST00000316763 PUF60Q9UHX1 559 aaKnown RBP15.67■□□□□ 0.1
VRK3-201ENST00000316763 IGF2BP3O00425 579 aaKnown RBP eCLIP15.66■□□□□ 0.1
VRK3-201ENST00000316763 TM4SF4P48230 202 aa15.66■□□□□ 0.1
VRK3-201ENST00000316763 PABPC4Q13310 644 aaKnown RBP eCLIP15.66■□□□□ 0.14e-9■■■■■ 30
VRK3-201ENST00000316763 MAN2A1Q16706 1144 aa15.66■□□□□ 0.1
VRK3-201ENST00000316763 HYIQ5T013 277 aa15.66■□□□□ 0.1
VRK3-201ENST00000316763 POTEEQ6S8J3 1075 aa15.66■□□□□ 0.1
VRK3-201ENST00000316763 HPS3Q969F9 1004 aa15.66■□□□□ 0.1
VRK3-201ENST00000316763 TRERF1Q96PN7 1200 aa15.66■□□□□ 0.1
VRK3-201ENST00000316763 AGPAT5Q9NUQ2 364 aa15.66■□□□□ 0.1
VRK3-201ENST00000316763 MYO6Q9UM54 1294 aa15.66■□□□□ 0.1
VRK3-201ENST00000316763 REXO2Q9Y3B8 237 aaKnown RBP15.66■□□□□ 0.1
VRK3-201ENST00000316763 RIPK3Q9Y572 518 aa15.66■□□□□ 0.1
VRK3-201ENST00000316763 COL11A1P12107 1806 aaPredicted RBP15.66■□□□□ 0.1
VRK3-201ENST00000316763 CTAGE15A4D2H0 777 aa15.66■□□□□ 0.1
VRK3-201ENST00000316763 EIF3CLB5ME19 914 aaKnown RBP15.66■□□□□ 0.1
VRK3-201ENST00000316763 FAM86B1E9PN63 330 aa15.66■□□□□ 0.1
VRK3-201ENST00000316763 FAM86B2P0C5J1 330 aa15.66■□□□□ 0.1
VRK3-201ENST00000316763 CTAGE8P0CG41 777 aa15.66■□□□□ 0.1
VRK3-201ENST00000316763 FAM193AP78312 1265 aa15.66■□□□□ 0.1
VRK3-201ENST00000316763 IRX3P78415 501 aaPredicted RBP15.66■□□□□ 0.1
VRK3-201ENST00000316763 SREBF2Q12772 1141 aa15.66■□□□□ 0.1
VRK3-201ENST00000316763 CCDC122Q5T0U0 273 aa15.66■□□□□ 0.1
VRK3-201ENST00000316763 LBX2Q6XYB7 198 aa15.66■□□□□ 0.1
VRK3-201ENST00000316763 CTAGE6Q86UF2 777 aa15.66■□□□□ 0.1
VRK3-201ENST00000316763 IFNL1Q8IU54 200 aa15.66■□□□□ 0.1
VRK3-201ENST00000316763 CTAGE4Q8IX94 777 aa15.66■□□□□ 0.1
VRK3-201ENST00000316763 EEF2KMTQ96G04 330 aa15.66■□□□□ 0.1
VRK3-201ENST00000316763 EIF3CQ99613 913 aaKnown RBP15.66■□□□□ 0.1
VRK3-201ENST00000316763 TEX13BQ9BXU2 312 aa15.66■□□□□ 0.1
VRK3-201ENST00000316763 NDST4Q9H3R1 872 aa15.66■□□□□ 0.1
VRK3-201ENST00000316763 ZSWIM4Q9H7M6 989 aa15.66■□□□□ 0.1
VRK3-201ENST00000316763 EHMT1Q9H9B1 1298 aa15.66■□□□□ 0.1
VRK3-201ENST00000316763 NHEJ1Q9H9Q4 299 aaPredicted RBP15.66■□□□□ 0.1
VRK3-201ENST00000316763 HOMER2Q9NSB8 354 aa15.66■□□□□ 0.1
VRK3-201ENST00000316763 COL20A1Q9P218 1284 aa15.66■□□□□ 0.1
VRK3-201ENST00000316763 SLC45A1Q9Y2W3 748 aa15.66■□□□□ 0.1
VRK3-201ENST00000316763 RPTORQ8N122 1335 aa15.65■□□□□ 0.1
VRK3-201ENST00000316763 CCDC151A5D8V7 595 aa15.65■□□□□ 0.1
VRK3-201ENST00000316763 TBX3O15119 743 aa15.65■□□□□ 0.1
VRK3-201ENST00000316763 TUBBP07437 444 aa15.65■□□□□ 0.1
VRK3-201ENST00000316763 OSBPP22059 807 aa15.65■□□□□ 0.1
VRK3-201ENST00000316763 SNRNP48Q6IEG0 339 aaKnown RBP15.65■□□□□ 0.1
VRK3-201ENST00000316763 MYOCDQ8IZQ8 938 aa15.65■□□□□ 0.1
VRK3-201ENST00000316763 ETNPPLQ8TBG4 499 aa15.65■□□□□ 0.1
VRK3-201ENST00000316763 JAKMIP2Q96AA8 810 aa15.65■□□□□ 0.1
VRK3-201ENST00000316763 NUDT12Q9BQG2 462 aa15.65■□□□□ 0.1
VRK3-201ENST00000316763 MAF1Q9H063 256 aa15.65■□□□□ 0.1
VRK3-201ENST00000316763 ABL1P00519 1130 aa15.64■□□□□ 0.09
VRK3-201ENST00000316763 CYP2C8P10632 490 aa15.64■□□□□ 0.09
VRK3-201ENST00000316763 HERVK_113P62684 666 aa15.64■□□□□ 0.09
VRK3-201ENST00000316763 EHHADHQ08426 723 aa15.64■□□□□ 0.09
VRK3-201ENST00000316763 TKFCQ3LXA3 575 aa15.64■□□□□ 0.09
VRK3-201ENST00000316763 CCDC65Q8IXS2 484 aa15.64■□□□□ 0.09
VRK3-201ENST00000316763 SLFN12Q8IYM2 578 aa15.64■□□□□ 0.09
VRK3-201ENST00000316763 SYTL5Q8TDW5 730 aaPredicted RBP15.64■□□□□ 0.09
VRK3-201ENST00000316763 TSGA10Q9BZW7 698 aa15.64■□□□□ 0.09
VRK3-201ENST00000316763 EPC1Q9H2F5 836 aa15.64■□□□□ 0.09
VRK3-201ENST00000316763 RNF146Q9NTX7 359 aa15.64■□□□□ 0.09
VRK3-201ENST00000316763 PANK4Q9NVE7 773 aa15.64■□□□□ 0.09
VRK3-201ENST00000316763 RABGAP1Q9Y3P9 1069 aa15.64■□□□□ 0.09
VRK3-201ENST00000316763 FRMPD4Q14CM0 1322 aa15.64■□□□□ 0.09
VRK3-201ENST00000316763 IGLV3-22A0A075B6J6 115 aa15.64■□□□□ 0.09
VRK3-201ENST00000316763 ERLIN1O75477 346 aa15.64■□□□□ 0.09
VRK3-201ENST00000316763 SEC31AO94979 1220 aaKnown RBP15.64■□□□□ 0.09
VRK3-201ENST00000316763 KIF20AO95235 890 aa15.64■□□□□ 0.09
VRK3-201ENST00000316763 KLK7P49862 253 aa15.64■□□□□ 0.09
VRK3-201ENST00000316763 RPS6P62753 249 aaKnown RBP15.64■□□□□ 0.09
VRK3-201ENST00000316763 COASYQ13057 564 aa15.64■□□□□ 0.09
VRK3-201ENST00000316763 SPA17Q15506 151 aa15.64■□□□□ 0.09
VRK3-201ENST00000316763 PRR16Q569H4 304 aa15.64■□□□□ 0.09
VRK3-201ENST00000316763 KCNK18Q7Z418 384 aa15.64■□□□□ 0.09
VRK3-201ENST00000316763 CCDC42Q96M95 316 aa15.64■□□□□ 0.09
VRK3-201ENST00000316763 PNMA3Q9UL41 463 aa15.64■□□□□ 0.09
VRK3-201ENST00000316763 HNRNPH3P31942 346 aaKnown RBP15.63■□□□□ 0.09
VRK3-201ENST00000316763 MAP2K2P36507 400 aa15.63■□□□□ 0.09
VRK3-201ENST00000316763 STAT3P40763 770 aa15.63■□□□□ 0.09
VRK3-201ENST00000316763 AMPD2Q01433 879 aa15.63■□□□□ 0.09
VRK3-201ENST00000316763 FAM26FQ5R3K3 315 aa15.63■□□□□ 0.09
VRK3-201ENST00000316763 MSANTD4Q8NCY6 345 aa15.63■□□□□ 0.09
VRK3-201ENST00000316763 DNAJC19Q96DA6 116 aa15.63■□□□□ 0.09
VRK3-201ENST00000316763 FAM20AQ96MK3 541 aa15.63■□□□□ 0.09
VRK3-201ENST00000316763 EDEM3Q9BZQ6 932 aa15.63■□□□□ 0.09
VRK3-201ENST00000316763 STK24Q9Y6E0 443 aa15.63■□□□□ 0.09
VRK3-201ENST00000316763 USO1O60763 962 aaKnown RBP15.62■□□□□ 0.09
VRK3-201ENST00000316763 SSBP05455 408 aaKnown RBP eCLIP15.62■□□□□ 0.09
VRK3-201ENST00000316763 PLA2G4AP47712 749 aa15.62■□□□□ 0.09
VRK3-201ENST00000316763 FKBP3Q00688 224 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms