RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 IP6K1Q92551 441 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 KITP10721 976 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 FLOT2Q14254 428 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 RGS9BPQ6ZS82 235 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 FRA10AC1Q70Z53 315 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 LGR6Q9HBX8 967 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 NOVA2Q9UNW9 492 aaKnown RBP5.97□□□□□ -1.45
CPSF2-201ENST00000298875 L3MBTL1Q9Y468 752 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 MAP3K19Q56UN5 1328 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 MYOM2P54296 1465 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 A0A0G2JND7 137 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 IQANK1A0A1B0GTG1 560 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 H0Y3Z8 333 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 MRPS35P82673 323 aaKnown RBP5.97□□□□□ -1.45
CPSF2-201ENST00000298875 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.97□□□□□ -1.45
CPSF2-201ENST00000298875 ALKBH8Q96BT7 664 aaKnown RBP5.97□□□□□ -1.45
CPSF2-201ENST00000298875 ACCSQ96QU6 501 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 STRIP2Q9ULQ0 834 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 ZBTB12Q9Y330 459 aaPredicted RBP5.97□□□□□ -1.45
CPSF2-201ENST00000298875 GTPBP10A4D1E9 387 aaKnown RBP5.97□□□□□ -1.45
CPSF2-201ENST00000298875 KLRF2D3W0D1 207 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 PYGLP06737 847 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 ADCY2Q08462 1091 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 LRRC41Q15345 812 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 DPCR1Q3MIW9 517 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 MIS18BP1Q6P0N0 1132 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 SZRD1Q7Z422 152 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 ZBTB33Q86T24 672 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 PNMA1Q8ND90 353 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 ATP6V0A1Q93050 837 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 TRIM63Q969Q1 353 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 OPTNQ96CV9 577 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 CHAMP1Q96JM3 812 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 PPP1R16BQ96T49 567 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 CARD14Q9BXL6 1004 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 TRIM55Q9BYV6 548 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 CPSF3Q9UKF6 684 aaKnown RBP5.97□□□□□ -1.45
CPSF2-201ENST00000298875 LAD1O00515 517 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 CLIC2O15247 247 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 SLFN14P0C7P3 912 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 HSPD1P10809 573 aaKnown RBP5.97□□□□□ -1.45
CPSF2-201ENST00000298875 HSPA6P17066 643 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 SRRM1Q8IYB3 904 aaKnown RBP5.97□□□□□ -1.45
CPSF2-201ENST00000298875 CHURC1Q8WUH1 139 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 UPF3AQ9H1J1 476 aaKnown RBP5.97□□□□□ -1.45
CPSF2-201ENST00000298875 MAN1B1Q9UKM7 699 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 PCDHA4Q9UN74 947 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 PCDHA13Q9Y5I0 950 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 SESN1Q9Y6P5 492 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 SPTLC3Q9NUV7 552 aa5.97□□□□□ -1.45
CPSF2-201ENST00000298875 UTP6Q9NYH9 597 aaKnown RBP5.97□□□□□ -1.45
CPSF2-201ENST00000298875 TAC1P20366 129 aa5.96□□□□□ -1.45
CPSF2-201ENST00000298875 SERPINB4P48594 390 aa5.96□□□□□ -1.45
CPSF2-201ENST00000298875 SCNN1DP51172 638 aa5.96□□□□□ -1.45
CPSF2-201ENST00000298875 DEFA1P59665 94 aa5.96□□□□□ -1.45
CPSF2-201ENST00000298875 DEFA3P59666 94 aa5.96□□□□□ -1.45
CPSF2-201ENST00000298875 MDM2Q00987 491 aaPredicted RBP5.96□□□□□ -1.45
CPSF2-201ENST00000298875 KRT33BQ14525 404 aa5.96□□□□□ -1.45
CPSF2-201ENST00000298875 CNGA2Q16280 664 aa5.96□□□□□ -1.45
CPSF2-201ENST00000298875 FANCBQ8NB91 859 aa5.96□□□□□ -1.45
CPSF2-201ENST00000298875 C3orf20Q8ND61 904 aa5.96□□□□□ -1.45
CPSF2-201ENST00000298875 TTLL11Q8NHH1 800 aa5.96□□□□□ -1.45
CPSF2-201ENST00000298875 P2RX5Q93086 422 aa5.96□□□□□ -1.45
CPSF2-201ENST00000298875 DHTKD1Q96HY7 919 aaPredicted RBP5.96□□□□□ -1.45
CPSF2-201ENST00000298875 ING2Q9H160 280 aa5.96□□□□□ -1.45
CPSF2-201ENST00000298875 NFU1Q9UMS0 254 aa5.96□□□□□ -1.45
CPSF2-201ENST00000298875 PPIP5K2O43314 1243 aa5.96□□□□□ -1.45
CPSF2-201ENST00000298875 HLA-DPA1P20036 260 aa5.96□□□□□ -1.45
CPSF2-201ENST00000298875 ARL4AP40617 200 aa5.96□□□□□ -1.45
CPSF2-201ENST00000298875 PABPC4Q13310 644 aaKnown RBP eCLIP5.96□□□□□ -1.45
CPSF2-201ENST00000298875 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.96□□□□□ -1.45
CPSF2-201ENST00000298875 TTC1Q99614 292 aa5.96□□□□□ -1.45
CPSF2-201ENST00000298875 ZNF577Q9BSK1 485 aa5.96□□□□□ -1.45
CPSF2-201ENST00000298875 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.96□□□□□ -1.45
CPSF2-201ENST00000298875 ZMYND12Q9H0C1 365 aa5.96□□□□□ -1.45
CPSF2-201ENST00000298875 COG4Q9H9E3 785 aa5.96□□□□□ -1.45
CPSF2-201ENST00000298875 PDP2Q9P2J9 529 aa5.96□□□□□ -1.45
CPSF2-201ENST00000298875 SEPT3Q9UH03 358 aa5.96□□□□□ -1.45
CPSF2-201ENST00000298875 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.96□□□□□ -1.456e-6■■■■■ 38.2
CPSF2-201ENST00000298875 NCKAP5LQ9HCH0 1330 aa5.96□□□□□ -1.45
CPSF2-201ENST00000298875 GRIN3BO60391 1043 aa5.96□□□□□ -1.45
CPSF2-201ENST00000298875 BBS5Q8N3I7 341 aa5.96□□□□□ -1.45
CPSF2-201ENST00000298875 IL1RAPL1Q9NZN1 696 aa5.96□□□□□ -1.45
CPSF2-201ENST00000298875 E2F6O75461 281 aa5.96□□□□□ -1.46
CPSF2-201ENST00000298875 PYGBP11216 843 aa5.96□□□□□ -1.46
CPSF2-201ENST00000298875 GAP43P17677 238 aa5.96□□□□□ -1.46
CPSF2-201ENST00000298875 FBXW4P57775 412 aa5.96□□□□□ -1.46
CPSF2-201ENST00000298875 RAPGEF5Q92565 580 aa5.96□□□□□ -1.46
CPSF2-201ENST00000298875 STK17AQ9UEE5 414 aa5.96□□□□□ -1.46
CPSF2-201ENST00000298875 E2F4Q16254 413 aa5.96□□□□□ -1.46
CPSF2-201ENST00000298875 ZNF658Q5TYW1 1059 aaPredicted RBP5.96□□□□□ -1.46
CPSF2-201ENST00000298875 ELMSAN1Q6PJG2 1045 aa5.96□□□□□ -1.46
CPSF2-201ENST00000298875 SCARA5Q6ZMJ2 495 aa5.96□□□□□ -1.46
CPSF2-201ENST00000298875 RNF207Q6ZRF8 634 aa5.96□□□□□ -1.46
CPSF2-201ENST00000298875 NEK9Q8TD19 979 aa5.96□□□□□ -1.46
CPSF2-201ENST00000298875 ZSWIM6Q9HCJ5 1215 aa5.96□□□□□ -1.46
CPSF2-201ENST00000298875 PALD1Q9ULE6 856 aa5.96□□□□□ -1.46
CPSF2-201ENST00000298875 ITM2BQ9Y287 266 aa5.96□□□□□ -1.46
CPSF2-201ENST00000298875 A0A087WWV3 80 aa5.96□□□□□ -1.46
CPSF2-201ENST00000298875 NEURL1BA8MQ27 555 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms