RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 CACNB3P54284 484 aa16.7■□□□□ 0.26
DDX56-201ENST00000258772 SNAP25P60880 206 aa16.7■□□□□ 0.26
DDX56-201ENST00000258772 USP38Q8NB14 1042 aa16.7■□□□□ 0.26
DDX56-201ENST00000258772 G3V3G9 751 aa16.69■□□□□ 0.26
DDX56-201ENST00000258772 CES2O00748 559 aa16.69■□□□□ 0.26
DDX56-201ENST00000258772 RPS6KA1Q15418 735 aa16.69■□□□□ 0.26
DDX56-201ENST00000258772 DNAJC21Q5F1R6 531 aaKnown RBP16.69■□□□□ 0.26
DDX56-201ENST00000258772 DCAF8Q5TAQ9 597 aa16.69■□□□□ 0.26
DDX56-201ENST00000258772 TAF4BQ92750 862 aa16.69■□□□□ 0.26
DDX56-201ENST00000258772 FAM20AQ96MK3 541 aa16.69■□□□□ 0.26
DDX56-201ENST00000258772 ZDHHC15Q96MV8 337 aa16.69■□□□□ 0.26
DDX56-201ENST00000258772 PI4KBQ9UBF8 816 aa16.69■□□□□ 0.26
DDX56-201ENST00000258772 NAGPAQ9UK23 515 aa16.69■□□□□ 0.26
DDX56-201ENST00000258772 TMEM59LQ9UK28 342 aa16.69■□□□□ 0.26
DDX56-201ENST00000258772 STK24Q9Y6E0 443 aa16.69■□□□□ 0.26
DDX56-201ENST00000258772 SPDYE3A6NKU9 549 aa16.69■□□□□ 0.26
DDX56-201ENST00000258772 F5H6K3 240 aa16.69■□□□□ 0.26
DDX56-201ENST00000258772 CLSTN1O94985 981 aa16.69■□□□□ 0.26
DDX56-201ENST00000258772 FOSP01100 380 aaPredicted RBP16.69■□□□□ 0.26
DDX56-201ENST00000258772 SREBF1P36956 1147 aa16.69■□□□□ 0.26
DDX56-201ENST00000258772 KLRC3Q07444 240 aa16.69■□□□□ 0.26
DDX56-201ENST00000258772 EPHA7Q15375 998 aa16.69■□□□□ 0.26
DDX56-201ENST00000258772 SKIDA1Q1XH10 827 aa16.69■□□□□ 0.26
DDX56-201ENST00000258772 RBM46Q8TBY0 533 aaKnown RBP16.69■□□□□ 0.26
DDX56-201ENST00000258772 CASKIN2Q8WXE0 1202 aa16.69■□□□□ 0.26
DDX56-201ENST00000258772 CCDC43Q96MW1 224 aaKnown RBP16.69■□□□□ 0.26
DDX56-201ENST00000258772 PCDHAC2Q9Y5I4 1007 aa16.69■□□□□ 0.26
DDX56-201ENST00000258772 ANKRD31Q8N7Z5 1873 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 RSPH10B2B2RC85 870 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 RSPH10BP0C881 870 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 PRKCIP41743 596 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 CORO7P57737 925 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 BMT2Q1RMZ1 405 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 USH1GQ495M9 461 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 CFAP58Q5T655 872 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 ALKBH5Q6P6C2 394 aaKnown RBP16.68■□□□□ 0.26
DDX56-201ENST00000258772 FBXO11Q86XK2 927 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 MREGQ8N565 214 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 METTL14Q9HCE5 456 aaKnown RBP16.68■□□□□ 0.26
DDX56-201ENST00000258772 TYW1Q9NV66 732 aaKnown RBP16.68■□□□□ 0.26
DDX56-201ENST00000258772 KCNK3O14649 394 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 EIF3HO15372 352 aaKnown RBP eCLIP16.68■□□□□ 0.263e-6■□□□□ 11.2
DDX56-201ENST00000258772 MSH4O15457 936 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 RAD51CO43502 376 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 KIF4AO95239 1232 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 NR3C1P04150 777 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 CIITAP33076 1130 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 MMP14P50281 582 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 GNGT1P63211 74 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 TNNC1P63316 161 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 SKOR1P84550 965 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 ICA1Q05084 483 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 SF3B2Q13435 895 aaKnown RBP16.68■□□□□ 0.26
DDX56-201ENST00000258772 TRADDQ15628 312 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 DCAF17Q5H9S7 520 aaPredicted RBP16.68■□□□□ 0.26
DDX56-201ENST00000258772 SLC27A3Q5K4L6 730 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 TCERG1LQ5VWI1 586 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 TATDN1Q6P1N9 297 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 BHMT2Q9H2M3 363 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 POLD4Q9HCU8 107 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 KCNQ5Q9NR82 932 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 FBXL5Q9UKA1 691 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 ASTN1O14525 1302 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 GRIN2DO15399 1336 aa16.68■□□□□ 0.26
DDX56-201ENST00000258772 KRT14P02533 472 aa16.67■□□□□ 0.26
DDX56-201ENST00000258772 RPL13P26373 211 aaKnown RBP16.67■□□□□ 0.26
DDX56-201ENST00000258772 MAGEA9P43362 315 aa16.67■□□□□ 0.26
DDX56-201ENST00000258772 NOP2P46087 812 aaKnown RBP16.67■□□□□ 0.26
DDX56-201ENST00000258772 CASP4P49662 377 aa16.67■□□□□ 0.26
DDX56-201ENST00000258772 CYP4A11Q02928 519 aa16.67■□□□□ 0.26
DDX56-201ENST00000258772 IFI16Q16666 785 aaKnown RBP16.67■□□□□ 0.26
DDX56-201ENST00000258772 SH3BP5LQ7L8J4 393 aa16.67■□□□□ 0.26
DDX56-201ENST00000258772 LRRC57Q8N9N7 239 aa16.67■□□□□ 0.26
DDX56-201ENST00000258772 SLC35C1Q96A29 364 aa16.67■□□□□ 0.26
DDX56-201ENST00000258772 PBKQ96KB5 322 aa16.67■□□□□ 0.26
DDX56-201ENST00000258772 BCAS3Q9H6U6 928 aa16.67■□□□□ 0.26
DDX56-201ENST00000258772 SIX2Q9NPC8 291 aa16.67■□□□□ 0.26
DDX56-201ENST00000258772 FAM198AQ9UFP1 575 aa16.67■□□□□ 0.26
DDX56-201ENST00000258772 VAV3Q9UKW4 847 aa16.67■□□□□ 0.26
DDX56-201ENST00000258772 ZNF233A6NK53 670 aa16.67■□□□□ 0.26
DDX56-201ENST00000258772 GUCY2FP51841 1108 aa16.67■□□□□ 0.26
DDX56-201ENST00000258772 TMEM179Q6ZVK1 233 aa16.67■□□□□ 0.26
DDX56-201ENST00000258772 DNAAF5Q86Y56 855 aa16.67■□□□□ 0.26
DDX56-201ENST00000258772 SEPT12Q8IYM1 358 aa16.67■□□□□ 0.26
DDX56-201ENST00000258772 CYP2W1Q8TAV3 490 aa16.67■□□□□ 0.26
DDX56-201ENST00000258772 WHAMMQ8TF30 809 aa16.67■□□□□ 0.26
DDX56-201ENST00000258772 PIK3R5Q8WYR1 880 aa16.67■□□□□ 0.26
DDX56-201ENST00000258772 POLR3CQ9BUI4 534 aaPredicted RBP16.67■□□□□ 0.26
DDX56-201ENST00000258772 RUSC1Q9BVN2 902 aa16.67■□□□□ 0.26
DDX56-201ENST00000258772 MRIQ9BWK5 157 aa16.67■□□□□ 0.26
DDX56-201ENST00000258772 IDI2Q9BXS1 227 aa16.67■□□□□ 0.26
DDX56-201ENST00000258772 GOLPH3Q9H4A6 298 aa16.67■□□□□ 0.26
DDX56-201ENST00000258772 SMCHD1A6NHR9 2005 aa16.66■□□□□ 0.26
DDX56-201ENST00000258772 A6NNZ2 444 aa16.66■□□□□ 0.26
DDX56-201ENST00000258772 ANKRD65E5RJM6 399 aa16.66■□□□□ 0.26
DDX56-201ENST00000258772 SLC16A3O15427 465 aaKnown RBP16.66■□□□□ 0.26
DDX56-201ENST00000258772 ONECUT3O60422 494 aaPredicted RBP16.66■□□□□ 0.26
DDX56-201ENST00000258772 FLOT1O75955 427 aa16.66■□□□□ 0.26
DDX56-201ENST00000258772 GCNT3O95395 438 aa16.66■□□□□ 0.26
DDX56-201ENST00000258772 EYA4O95677 639 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms