RNA–Protein interactions for RNA: ENST00000248444.9

VIL1-201, Transcript of villin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIL1, Length 6,531 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-201ENST00000248444 USP42Q9H9J4 1324 aaKnown RBP10.85□□□□□ -0.67
VIL1-201ENST00000248444 ACTN1P12814 892 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 CLCN1P35523 988 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 TSPY1Q01534 308 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 GOLGA8FQ08AF8 430 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 GOLGA8DPQ0D2H9 430 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 ZNF394Q53GI3 561 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 RUFY4Q6ZNE9 571 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 BEST2Q8NFU1 509 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 OXER1Q8TDS5 423 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 UBN1Q9NPG3 1134 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 U2AF2P26368 475 aaKnown RBP eCLIP10.84□□□□□ -0.67
VIL1-201ENST00000248444 CDO1Q16878 200 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 DPCR1Q3MIW9 517 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 C9orf131Q5VYM1 1079 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 GDAP1L1Q96MZ0 367 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 TMEM39BQ9GZU3 492 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 LMTK2Q8IWU2 1503 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 CEP170BQ9Y4F5 1589 aaPredicted RBP10.84□□□□□ -0.67
VIL1-201ENST00000248444 MYO3AQ8NEV4 1616 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 C19orf81C9J6K1 198 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 HEXIM1O94992 359 aaKnown RBP10.84□□□□□ -0.67
VIL1-201ENST00000248444 RBL2Q08999 1139 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 C12orf60Q5U649 245 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 CROCCP2Q86T23 111 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 ANKRD42Q8N9B4 389 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 AFAP1L1Q8TED9 768 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 PRPF31Q8WWY3 499 aaKnown RBP10.84□□□□□ -0.67
VIL1-201ENST00000248444 FAM213AQ9BRX8 229 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 TRIM56Q9BRZ2 755 aaKnown RBP10.84□□□□□ -0.67
VIL1-201ENST00000248444 EPN1Q9Y6I3 576 aaPredicted RBP10.84□□□□□ -0.67
VIL1-201ENST00000248444 PRPSAP2O60256 369 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 HUS1O60921 280 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 CD2BP2O95400 341 aaKnown RBP10.84□□□□□ -0.67
VIL1-201ENST00000248444 P4HBP07237 508 aaKnown RBP10.84□□□□□ -0.67
VIL1-201ENST00000248444 CIITAP33076 1130 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 QARSP47897 775 aaKnown RBP10.84□□□□□ -0.67
VIL1-201ENST00000248444 SFR1Q86XK3 245 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 STAG2Q8N3U4 1231 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 IPO5O00410 1097 aaKnown RBP10.84□□□□□ -0.67
VIL1-201ENST00000248444 ECE1P42892 770 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 SREBF2Q12772 1141 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 SF3A3Q12874 501 aaKnown RBP eCLIP10.84□□□□□ -0.671e-6■■■□□ 18
VIL1-201ENST00000248444 RESTQ13127 1097 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 TOB2Q14106 344 aaPredicted RBP10.84□□□□□ -0.67
VIL1-201ENST00000248444 RWDD4Q6NW29 188 aaKnown RBP10.84□□□□□ -0.67
VIL1-201ENST00000248444 CYFIP1Q7L576 1253 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 NEDD1Q8NHV4 660 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 LBHD1Q9BQE6 289 aaPredicted RBP10.84□□□□□ -0.67
VIL1-201ENST00000248444 BARHL2Q9NY43 387 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 SLC9A2Q9UBY0 812 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 EBAG9O00559 213 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 BUB1BO60566 1050 aaPredicted RBP10.84□□□□□ -0.67
VIL1-201ENST00000248444 KRT10P13645 584 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 GKAP1Q5VSY0 366 aaPredicted RBP10.84□□□□□ -0.67
VIL1-201ENST00000248444 FAM20AQ96MK3 541 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 CALN1Q9BXU9 219 aa10.84□□□□□ -0.67
VIL1-201ENST00000248444 MKRN1Q9UHC7 482 aaKnown RBP10.84□□□□□ -0.67
VIL1-201ENST00000248444 ARHGEF40Q8TER5 1519 aa10.83□□□□□ -0.67
VIL1-201ENST00000248444 POTEB3A0JP26 581 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 POTECB2RU33 542 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 S100BP04271 92 aaPredicted RBP10.83□□□□□ -0.68
VIL1-201ENST00000248444 ZNF131P52739 623 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 SNX1Q13596 522 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 POTEBQ6S5H4 581 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 SDCCAG8Q86SQ7 713 aaPredicted RBP10.83□□□□□ -0.68
VIL1-201ENST00000248444 MB21D2Q8IYB1 491 aaPredicted RBP10.83□□□□□ -0.68
VIL1-201ENST00000248444 IRAK4Q9NWZ3 460 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 DYNC1LI2O43237 492 aaPredicted RBP10.83□□□□□ -0.68
VIL1-201ENST00000248444 GSTA1P08263 222 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 GSTA2P09210 222 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 CETPP11597 493 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 CCNE1P24864 410 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 EPHB1P54762 984 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 YWHAGP61981 247 aaKnown RBP eCLIP10.83□□□□□ -0.68
VIL1-201ENST00000248444 CCDC13Q8IYE1 715 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 NCAPGQ9BPX3 1015 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 LXNQ9BS40 222 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 C2orf40Q9H1Z8 148 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 MRPL47Q9HD33 250 aaKnown RBP10.83□□□□□ -0.68
VIL1-201ENST00000248444 TACC3Q9Y6A5 838 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 WDR46O15213 610 aaKnown RBP10.83□□□□□ -0.68
VIL1-201ENST00000248444 C6orf222P0C671 652 aaPredicted RBP10.83□□□□□ -0.68
VIL1-201ENST00000248444 LLGL1Q15334 1064 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 RPS6KA2Q15349 733 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 ELF2Q15723 593 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 ARL13BQ3SXY8 428 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 PPP4R1Q8TF05 950 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 RAD54LQ92698 747 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 DEFB129Q9H1M3 183 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 THAP9Q9H5L6 903 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 ENTPD3O75355 529 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 RPS12P25398 132 aaKnown RBP10.83□□□□□ -0.68
VIL1-201ENST00000248444 CDC27P30260 824 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 PSMC5P62195 406 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 ALX1Q15699 326 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 ZNF699Q32M78 642 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 KRT71Q3SY84 523 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 PHLPP2Q6ZVD8 1323 aa10.83□□□□□ -0.68
VIL1-201ENST00000248444 CEP85LQ5SZL2 805 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms