RNA–Protein interactions for RNA: ENST00000246672.3

NR1D1-201, Transcript of nuclear receptor subfamily 1 group D member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1-201ENST00000246672 DCP1AQ9NPI6 582 aaPredicted RBP13.58□□□□□ -0.24
NR1D1-201ENST00000246672 BLOC1S4Q9NUP1 217 aa13.58□□□□□ -0.24
NR1D1-201ENST00000246672 INTS9Q9NV88 658 aaKnown RBP13.58□□□□□ -0.24
NR1D1-201ENST00000246672 LIN7AO14910 233 aaPredicted RBP13.58□□□□□ -0.24
NR1D1-201ENST00000246672 EIF3BP55884 814 aaKnown RBP13.58□□□□□ -0.24
NR1D1-201ENST00000246672 GRB10Q13322 594 aa13.58□□□□□ -0.24
NR1D1-201ENST00000246672 FAM133AQ8N9E0 248 aa13.58□□□□□ -0.24
NR1D1-201ENST00000246672 DAGLBQ8NCG7 672 aa13.58□□□□□ -0.24
NR1D1-201ENST00000246672 KCNV2Q8TDN2 545 aa13.58□□□□□ -0.24
NR1D1-201ENST00000246672 KLHL29Q96CT2 875 aa13.58□□□□□ -0.24
NR1D1-201ENST00000246672 ZFATQ9P243 1243 aa13.58□□□□□ -0.24
NR1D1-201ENST00000246672 ZNF142P52746 1687 aaPredicted RBP13.58□□□□□ -0.24
NR1D1-201ENST00000246672 COL22A1Q8NFW1 1626 aaPredicted RBP13.58□□□□□ -0.24
NR1D1-201ENST00000246672 TOGARAM1Q9Y4F4 1720 aa13.57□□□□□ -0.24
NR1D1-201ENST00000246672 MYBL1P10243 752 aa13.57□□□□□ -0.24
NR1D1-201ENST00000246672 TXKP42681 527 aa13.57□□□□□ -0.24
NR1D1-201ENST00000246672 LRRC63Q05C16 580 aa13.57□□□□□ -0.24
NR1D1-201ENST00000246672 GRIPAP1Q4V328 841 aa13.57□□□□□ -0.24
NR1D1-201ENST00000246672 TRIM51Q9BSJ1 452 aa13.57□□□□□ -0.24
NR1D1-201ENST00000246672 EPB41L4BQ9H329 900 aa13.57□□□□□ -0.24
NR1D1-201ENST00000246672 CPVLQ9H3G5 476 aa13.57□□□□□ -0.24
NR1D1-201ENST00000246672 IL17RBQ9NRM6 502 aa13.57□□□□□ -0.24
NR1D1-201ENST00000246672 BARHL2Q9NY43 387 aa13.57□□□□□ -0.24
NR1D1-201ENST00000246672 MAD2L2Q9UI95 211 aa13.57□□□□□ -0.24
NR1D1-201ENST00000246672 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.57□□□□□ -0.24
NR1D1-201ENST00000246672 NHSL1Q5SYE7 1610 aa13.57□□□□□ -0.24
NR1D1-201ENST00000246672 PPFIA2O75334 1257 aa13.57□□□□□ -0.24
NR1D1-201ENST00000246672 FESP07332 822 aa13.57□□□□□ -0.24
NR1D1-201ENST00000246672 ZBTB48P10074 688 aaPredicted RBP13.57□□□□□ -0.24
NR1D1-201ENST00000246672 ATF3P18847 181 aa13.57□□□□□ -0.24
NR1D1-201ENST00000246672 ATP4AP20648 1035 aa13.57□□□□□ -0.24
NR1D1-201ENST00000246672 TFAP4Q01664 338 aa13.57□□□□□ -0.24
NR1D1-201ENST00000246672 KLHL30Q0D2K2 578 aa13.57□□□□□ -0.24
NR1D1-201ENST00000246672 HOOK3Q86VS8 718 aa13.57□□□□□ -0.24
NR1D1-201ENST00000246672 SYN2Q92777 582 aaPredicted RBP13.57□□□□□ -0.24
NR1D1-201ENST00000246672 FMO2Q99518 471 aa13.57□□□□□ -0.24
NR1D1-201ENST00000246672 OSBPL1AQ9BXW6 950 aa13.57□□□□□ -0.24
NR1D1-201ENST00000246672 TXLNGYQ9BZA5 131 aa13.57□□□□□ -0.24
NR1D1-201ENST00000246672 ADAM22Q9P0K1 906 aa13.57□□□□□ -0.24
NR1D1-201ENST00000246672 CASZ1Q86V15 1759 aa13.57□□□□□ -0.24
NR1D1-201ENST00000246672 A0A1B0GUL6 1792 aa13.56□□□□□ -0.24
NR1D1-201ENST00000246672 CCDC188H7C350 402 aa13.56□□□□□ -0.24
NR1D1-201ENST00000246672 SNX3O60493 162 aa13.56□□□□□ -0.24
NR1D1-201ENST00000246672 ATP2A2P16615 1042 aaKnown RBP13.56□□□□□ -0.24
NR1D1-201ENST00000246672 RPS6KA3P51812 740 aa13.56□□□□□ -0.24
NR1D1-201ENST00000246672 MKRN4PQ13434 485 aaPredicted RBP13.56□□□□□ -0.24
NR1D1-201ENST00000246672 SEC14L1Q92503 715 aa13.56□□□□□ -0.24
NR1D1-201ENST00000246672 PNMA5Q96PV4 448 aa13.56□□□□□ -0.24
NR1D1-201ENST00000246672 AZI2Q9H6S1 392 aa13.56□□□□□ -0.24
NR1D1-201ENST00000246672 GOPCQ9HD26 462 aa13.56□□□□□ -0.24
NR1D1-201ENST00000246672 TRIM33Q9UPN9 1127 aa13.56□□□□□ -0.24
NR1D1-201ENST00000246672 MYH4Q9Y623 1939 aa13.56□□□□□ -0.24
NR1D1-201ENST00000246672 ZNF804BA4D1E1 1349 aa13.56□□□□□ -0.24
NR1D1-201ENST00000246672 RREB1Q92766 1687 aa13.56□□□□□ -0.24
NR1D1-201ENST00000246672 AHCYL1O43865 530 aa13.56□□□□□ -0.24
NR1D1-201ENST00000246672 GOLGA8HP0CJ92 632 aa13.56□□□□□ -0.24
NR1D1-201ENST00000246672 TAF11Q15544 211 aa13.56□□□□□ -0.24
NR1D1-201ENST00000246672 IFI16Q16666 785 aaKnown RBP13.56□□□□□ -0.24
NR1D1-201ENST00000246672 GNPTABQ3T906 1256 aa13.56□□□□□ -0.24
NR1D1-201ENST00000246672 GALNTL6Q49A17 601 aa13.56□□□□□ -0.24
NR1D1-201ENST00000246672 SLC30A9Q6PML9 568 aa13.56□□□□□ -0.24
NR1D1-201ENST00000246672 LRRC57Q8N9N7 239 aa13.56□□□□□ -0.24
NR1D1-201ENST00000246672 NAF1Q96HR8 494 aaKnown RBP13.56□□□□□ -0.24
NR1D1-201ENST00000246672 TSG101Q99816 390 aa13.56□□□□□ -0.24
NR1D1-201ENST00000246672 NUCKS1Q9H1E3 243 aaKnown RBP13.56□□□□□ -0.24
NR1D1-201ENST00000246672 UTP11Q9Y3A2 253 aaKnown RBP13.56□□□□□ -0.24
NR1D1-201ENST00000246672 COL4A3BPQ9Y5P4 624 aa13.56□□□□□ -0.24
NR1D1-201ENST00000246672 SHANK3Q9BYB0 1731 aa13.56□□□□□ -0.24
NR1D1-201ENST00000246672 PVALEFA0A1B0GWK0 134 aa13.55□□□□□ -0.24
NR1D1-201ENST00000246672 DPPA5A6NC42 116 aa13.55□□□□□ -0.24
NR1D1-201ENST00000246672 TRAF5O00463 557 aa13.55□□□□□ -0.24
NR1D1-201ENST00000246672 MSH2P43246 934 aa13.55□□□□□ -0.24
NR1D1-201ENST00000246672 CTCFP49711 727 aaPredicted RBP13.55□□□□□ -0.24
NR1D1-201ENST00000246672 GRM4Q14833 912 aa13.55□□□□□ -0.24
NR1D1-201ENST00000246672 NONOQ15233 471 aaKnown RBP eCLIP13.55□□□□□ -0.24
NR1D1-201ENST00000246672 CCDC152Q4G0S7 254 aa13.55□□□□□ -0.24
NR1D1-201ENST00000246672 TRIM68Q6AZZ1 485 aa13.55□□□□□ -0.24
NR1D1-201ENST00000246672 ATP8B4Q8TF62 1192 aa13.55□□□□□ -0.24
NR1D1-201ENST00000246672 PGM2Q96G03 612 aa13.55□□□□□ -0.24
NR1D1-201ENST00000246672 SLITRK6Q9H5Y7 841 aa13.55□□□□□ -0.24
NR1D1-201ENST00000246672 FAM114A2Q9NRY5 505 aa13.55□□□□□ -0.24
NR1D1-201ENST00000246672 PNMA3Q9UL41 463 aa13.55□□□□□ -0.24
NR1D1-201ENST00000246672 ERVV-1B6SEH8 477 aa13.55□□□□□ -0.24
NR1D1-201ENST00000246672 COPS2P61201 443 aa13.55□□□□□ -0.24
NR1D1-201ENST00000246672 BNIP1Q12981 228 aa13.55□□□□□ -0.24
NR1D1-201ENST00000246672 ASIC2Q16515 512 aa13.55□□□□□ -0.24
NR1D1-201ENST00000246672 GALNT17Q6IS24 598 aa13.55□□□□□ -0.24
NR1D1-201ENST00000246672 LARP4BQ92615 738 aaKnown RBP13.55□□□□□ -0.24
NR1D1-201ENST00000246672 RNF25Q96BH1 459 aaPredicted RBP13.55□□□□□ -0.24
NR1D1-201ENST00000246672 NR2E1Q9Y466 385 aa13.55□□□□□ -0.24
NR1D1-201ENST00000246672 USP17L3A6NCW0 530 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 USP17L4A6NCW7 530 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 MPHOSPH10O00566 681 aaKnown RBP13.54□□□□□ -0.24
NR1D1-201ENST00000246672 RGS16O15492 202 aaPredicted RBP13.54□□□□□ -0.24
NR1D1-201ENST00000246672 LUC7L3O95232 432 aaKnown RBP13.54□□□□□ -0.24
NR1D1-201ENST00000246672 USP17L8P0C7I0 530 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 NEFHP12036 1026 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 NAPAP54920 295 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 TRAF1Q13077 416 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 UBAP2Q5T6F2 1119 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms