RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 NFX1Q12986 1120 aaKnown RBP15.82■□□□□ 0.12
DDX39A-201ENST00000242776 COASYQ13057 564 aa15.82■□□□□ 0.12
DDX39A-201ENST00000242776 UBE2SQ16763 222 aa15.82■□□□□ 0.12
DDX39A-201ENST00000242776 ZBTB33Q86T24 672 aa15.82■□□□□ 0.12
DDX39A-201ENST00000242776 GIMAP8Q8ND71 665 aaPredicted RBP15.82■□□□□ 0.12
DDX39A-201ENST00000242776 ATOH1Q92858 354 aaPredicted RBP15.82■□□□□ 0.12
DDX39A-201ENST00000242776 SENP7Q9BQF6 1050 aa15.82■□□□□ 0.12
DDX39A-201ENST00000242776 PHF7Q9BWX1 381 aaPredicted RBP15.82■□□□□ 0.12
DDX39A-201ENST00000242776 TRPV2Q9Y5S1 764 aa15.82■□□□□ 0.12
DDX39A-201ENST00000242776 EVPLQ92817 2033 aa15.81■□□□□ 0.12
DDX39A-201ENST00000242776 hCG_1642624A0A1W2PR95 340 aa15.81■□□□□ 0.12
DDX39A-201ENST00000242776 MEIS2O14770 477 aa15.81■□□□□ 0.12
DDX39A-201ENST00000242776 STAG3L1P0CL83 205 aa15.81■□□□□ 0.12
DDX39A-201ENST00000242776 TROAPQ12815 778 aa15.81■□□□□ 0.12
DDX39A-201ENST00000242776 IER5Q5VY09 327 aa15.81■□□□□ 0.12
DDX39A-201ENST00000242776 LLGL2Q6P1M3 1020 aa15.81■□□□□ 0.12
DDX39A-201ENST00000242776 CATIPQ7Z7H3 387 aa15.81■□□□□ 0.12
DDX39A-201ENST00000242776 RALYLQ86SE5 291 aaKnown RBP15.81■□□□□ 0.12
DDX39A-201ENST00000242776 CMTR1Q8N1G2 835 aaKnown RBP15.81■□□□□ 0.12
DDX39A-201ENST00000242776 VN1R2Q8NFZ6 395 aa15.81■□□□□ 0.12
DDX39A-201ENST00000242776 RRP36Q96EU6 259 aaKnown RBP15.81■□□□□ 0.12
DDX39A-201ENST00000242776 SMARCAD1Q9H4L7 1026 aa15.81■□□□□ 0.12
DDX39A-201ENST00000242776 MBLAC1A4D2B0 266 aaPredicted RBP15.8■□□□□ 0.12
DDX39A-201ENST00000242776 TBKBP1A7MCY6 615 aa15.8■□□□□ 0.12
DDX39A-201ENST00000242776 H0Y858 1186 aa15.8■□□□□ 0.12
DDX39A-201ENST00000242776 PDGFBP01127 241 aaPredicted RBP15.8■□□□□ 0.12
DDX39A-201ENST00000242776 ITGB5P18084 799 aa15.8■□□□□ 0.12
DDX39A-201ENST00000242776 SIGLEC14Q08ET2 396 aa15.8■□□□□ 0.12
DDX39A-201ENST00000242776 APOBRQ0VD83 1088 aa15.8■□□□□ 0.12
DDX39A-201ENST00000242776 MTMR1Q13613 665 aa15.8■□□□□ 0.12
DDX39A-201ENST00000242776 NAALADL2Q58DX5 795 aa15.8■□□□□ 0.12
DDX39A-201ENST00000242776 RUFY2Q8WXA3 655 aa15.8■□□□□ 0.12
DDX39A-201ENST00000242776 PPP1R16BQ96T49 567 aa15.8■□□□□ 0.12
DDX39A-201ENST00000242776 TLR9Q9NR96 1032 aa15.8■□□□□ 0.12
DDX39A-201ENST00000242776 TSHZ2Q9NRE2 1034 aa15.8■□□□□ 0.12
DDX39A-201ENST00000242776 CFAP54Q96N23 3096 aa15.8■□□□□ 0.12
DDX39A-201ENST00000242776 CYP21A2P08686 494 aa15.79■□□□□ 0.12
DDX39A-201ENST00000242776 ERVFC1P60507 584 aa15.79■□□□□ 0.12
DDX39A-201ENST00000242776 PTH1RQ03431 593 aa15.79■□□□□ 0.12
DDX39A-201ENST00000242776 PLPP4Q5VZY2 271 aa15.79■□□□□ 0.12
DDX39A-201ENST00000242776 RAB11FIP4Q86YS3 637 aa15.79■□□□□ 0.12
DDX39A-201ENST00000242776 THNSL1Q8IYQ7 743 aa15.79■□□□□ 0.12
DDX39A-201ENST00000242776 GPRASP2Q96D09 838 aa15.79■□□□□ 0.12
DDX39A-201ENST00000242776 PCYT2Q99447 389 aa15.79■□□□□ 0.12
DDX39A-201ENST00000242776 PRRX2Q99811 253 aa15.79■□□□□ 0.12
DDX39A-201ENST00000242776 FTHL17Q9BXU8 183 aa15.79■□□□□ 0.12
DDX39A-201ENST00000242776 CELF4Q9BZC1 486 aaKnown RBP15.79■□□□□ 0.12
DDX39A-201ENST00000242776 TMX1Q9H3N1 280 aa15.79■□□□□ 0.12
DDX39A-201ENST00000242776 SEC63Q9UGP8 760 aaKnown RBP15.79■□□□□ 0.12
DDX39A-201ENST00000242776 PCDHB7Q9Y5E2 793 aa15.79■□□□□ 0.12
DDX39A-201ENST00000242776 MYO10Q9HD67 2058 aa15.79■□□□□ 0.12
DDX39A-201ENST00000242776 PLXNA3P51805 1871 aa15.79■□□□□ 0.12
DDX39A-201ENST00000242776 RRN3P2A6NIE6 340 aa15.78■□□□□ 0.12
DDX39A-201ENST00000242776 EIF5BO60841 1220 aaKnown RBP15.78■□□□□ 0.12
DDX39A-201ENST00000242776 PLEKHA8P1O95397 391 aa15.78■□□□□ 0.12
DDX39A-201ENST00000242776 RXRAP19793 462 aa15.78■□□□□ 0.12
DDX39A-201ENST00000242776 CHMLP26374 656 aa15.78■□□□□ 0.12
DDX39A-201ENST00000242776 AVPR2P30518 371 aa15.78■□□□□ 0.12
DDX39A-201ENST00000242776 CBX2Q14781 532 aaPredicted RBP15.78■□□□□ 0.12
DDX39A-201ENST00000242776 SART3Q15020 963 aaKnown RBP15.78■□□□□ 0.12
DDX39A-201ENST00000242776 PLCB4Q15147 1175 aa15.78■□□□□ 0.12
DDX39A-201ENST00000242776 FAM102BQ5T8I3 360 aa15.78■□□□□ 0.12
DDX39A-201ENST00000242776 XRRA1Q6P2D8 792 aa15.78■□□□□ 0.12
DDX39A-201ENST00000242776 CRIPAKQ8N1N5 446 aa15.78■□□□□ 0.12
DDX39A-201ENST00000242776 ASIC4Q96FT7 647 aa15.78■□□□□ 0.12
DDX39A-201ENST00000242776 NEK1Q96PY6 1258 aa15.78■□□□□ 0.12
DDX39A-201ENST00000242776 AZI2Q9H6S1 392 aa15.78■□□□□ 0.12
DDX39A-201ENST00000242776 TMEM260Q9NX78 707 aa15.78■□□□□ 0.12
DDX39A-201ENST00000242776 CDH22Q9UJ99 828 aa15.78■□□□□ 0.12
DDX39A-201ENST00000242776 PCDHB12Q9Y5F1 795 aa15.78■□□□□ 0.12
DDX39A-201ENST00000242776 ZFHX2Q9C0A1 2572 aaPredicted RBP15.78■□□□□ 0.12
DDX39A-201ENST00000242776 E7EWF7 191 aa15.78■□□□□ 0.12
DDX39A-201ENST00000242776 MGEA5O60502 916 aa15.78■□□□□ 0.12
DDX39A-201ENST00000242776 FGF18O76093 207 aa15.78■□□□□ 0.12
DDX39A-201ENST00000242776 TECP42680 631 aa15.78■□□□□ 0.12
DDX39A-201ENST00000242776 KRT76Q01546 638 aa15.78■□□□□ 0.12
DDX39A-201ENST00000242776 PKN1Q16512 942 aa15.78■□□□□ 0.12
DDX39A-201ENST00000242776 CCDC82Q8N4S0 544 aa15.78■□□□□ 0.12
DDX39A-201ENST00000242776 NCOA7Q8NI08 942 aa15.78■□□□□ 0.12
DDX39A-201ENST00000242776 CTCFLQ8NI51 663 aaPredicted RBP15.78■□□□□ 0.12
DDX39A-201ENST00000242776 CDHR1Q96JP9 859 aa15.78■□□□□ 0.12
DDX39A-201ENST00000242776 PSTPIP2Q9H939 334 aa15.78■□□□□ 0.12
DDX39A-201ENST00000242776 U3KPZ7 1027 aaPredicted RBP15.78■□□□□ 0.12
DDX39A-201ENST00000242776 IGSF9BQ9UPX0 1349 aa15.77■□□□□ 0.12
DDX39A-201ENST00000242776 PIK3CDO00329 1044 aa15.77■□□□□ 0.11
DDX39A-201ENST00000242776 FGFR1P11362 822 aa15.77■□□□□ 0.11
DDX39A-201ENST00000242776 SARSP49591 514 aaKnown RBP15.77■□□□□ 0.11
DDX39A-201ENST00000242776 ANTXR2P58335 489 aa15.77■□□□□ 0.11
DDX39A-201ENST00000242776 PTPN21Q16825 1174 aa15.77■□□□□ 0.11
DDX39A-201ENST00000242776 DUSP6Q16828 381 aa15.77■□□□□ 0.11
DDX39A-201ENST00000242776 ZNF654Q8IZM8 581 aa15.77■□□□□ 0.11
DDX39A-201ENST00000242776 COLGALT1Q8NBJ5 622 aa15.77■□□□□ 0.11
DDX39A-201ENST00000242776 PGBD1Q96JS3 809 aa15.77■□□□□ 0.11
DDX39A-201ENST00000242776 CDHR5Q9HBB8 845 aa15.77■□□□□ 0.11
DDX39A-201ENST00000242776 JPH1Q9HDC5 661 aaPredicted RBP15.77■□□□□ 0.11
DDX39A-201ENST00000242776 TYW1Q9NV66 732 aaKnown RBP15.77■□□□□ 0.11
DDX39A-201ENST00000242776 PCDHA2Q9Y5H9 948 aa15.77■□□□□ 0.11
DDX39A-201ENST00000242776 UBIAD1Q9Y5Z9 338 aa15.77■□□□□ 0.11
DDX39A-201ENST00000242776 DENND3A2RUS2 1198 aa15.76■□□□□ 0.11
DDX39A-201ENST00000242776 DDX39AO00148 427 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms