RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 CEP95Q96GE4 821 aa12.46□□□□□ -0.41
NOD1-201ENST00000222823 SFI1A8K8P3 1242 aa12.46□□□□□ -0.41
NOD1-201ENST00000222823 POC1B-GALNT4F8VUJ3 575 aa12.46□□□□□ -0.41
NOD1-201ENST00000222823 HSPA6P17066 643 aa12.46□□□□□ -0.41
NOD1-201ENST00000222823 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.46□□□□□ -0.41
NOD1-201ENST00000222823 PCDHA13Q9Y5I0 950 aa12.46□□□□□ -0.41
NOD1-201ENST00000222823 IFNAR2P48551 515 aa12.46□□□□□ -0.42
NOD1-201ENST00000222823 PIGOQ8TEQ8 1089 aa12.46□□□□□ -0.42
NOD1-201ENST00000222823 ARHGEF1Q92888 912 aaKnown RBP12.46□□□□□ -0.42
NOD1-201ENST00000222823 PARD6BQ9BYG5 372 aa12.46□□□□□ -0.42
NOD1-201ENST00000222823 INTS9Q9NV88 658 aaKnown RBP12.46□□□□□ -0.42
NOD1-201ENST00000222823 SEPT10Q9P0V9 454 aa12.46□□□□□ -0.42
NOD1-201ENST00000222823 ATP8A1Q9Y2Q0 1164 aa12.46□□□□□ -0.42
NOD1-201ENST00000222823 SETD1AO15047 1707 aaKnown RBP12.45□□□□□ -0.42
NOD1-201ENST00000222823 PSAPP07602 524 aa12.45□□□□□ -0.42
NOD1-201ENST00000222823 ADRA2BP18089 450 aa12.45□□□□□ -0.42
NOD1-201ENST00000222823 DMTNQ08495 405 aa12.45□□□□□ -0.42
NOD1-201ENST00000222823 ALCAMQ13740 583 aa12.45□□□□□ -0.42
NOD1-201ENST00000222823 RPS6KA2Q15349 733 aa12.45□□□□□ -0.42
NOD1-201ENST00000222823 PPP1R2P3Q6NXS1 205 aa12.45□□□□□ -0.42
NOD1-201ENST00000222823 METTL16Q86W50 562 aaKnown RBP12.45□□□□□ -0.42
NOD1-201ENST00000222823 IFT122Q9HBG6 1241 aa12.45□□□□□ -0.42
NOD1-201ENST00000222823 PCDHA6Q9UN73 950 aa12.45□□□□□ -0.42
NOD1-201ENST00000222823 STK38LQ9Y2H1 464 aa12.45□□□□□ -0.42
NOD1-201ENST00000222823 PCDHA8Q9Y5H6 950 aa12.45□□□□□ -0.42
NOD1-201ENST00000222823 FAM196BA6NMK8 535 aa12.45□□□□□ -0.42
NOD1-201ENST00000222823 SGK1O00141 431 aa12.45□□□□□ -0.42
NOD1-201ENST00000222823 OSBPP22059 807 aa12.45□□□□□ -0.42
NOD1-201ENST00000222823 KIF22Q14807 665 aa12.45□□□□□ -0.42
NOD1-201ENST00000222823 DCAF4Q8WV16 495 aa12.45□□□□□ -0.42
NOD1-201ENST00000222823 PBKQ96KB5 322 aa12.45□□□□□ -0.42
NOD1-201ENST00000222823 CAPN7Q9Y6W3 813 aa12.45□□□□□ -0.42
NOD1-201ENST00000222823 PEX3P56589 373 aa12.45□□□□□ -0.42
NOD1-201ENST00000222823 DALRD3Q5D0E6 543 aaKnown RBP12.45□□□□□ -0.42
NOD1-201ENST00000222823 DNAJC24Q6P3W2 148 aa12.45□□□□□ -0.42
NOD1-201ENST00000222823 KSR1Q8IVT5 923 aa12.45□□□□□ -0.42
NOD1-201ENST00000222823 C7orf31Q8N865 590 aa12.45□□□□□ -0.42
NOD1-201ENST00000222823 CDKL2Q92772 493 aa12.45□□□□□ -0.42
NOD1-201ENST00000222823 FAM84BQ96KN1 310 aaPredicted RBP12.45□□□□□ -0.42
NOD1-201ENST00000222823 ATF5Q9Y2D1 282 aaPredicted RBP12.45□□□□□ -0.42
NOD1-201ENST00000222823 NALCNQ8IZF0 1738 aa12.45□□□□□ -0.42
NOD1-201ENST00000222823 SNX1Q13596 522 aa12.45□□□□□ -0.42
NOD1-201ENST00000222823 RNF207Q6ZRF8 634 aa12.45□□□□□ -0.42
NOD1-201ENST00000222823 RSRC2Q7L4I2 434 aaKnown RBP12.45□□□□□ -0.42
NOD1-201ENST00000222823 SPATS2Q86XZ4 545 aaKnown RBP12.45□□□□□ -0.42
NOD1-201ENST00000222823 GOLGA8IPA6NC78 632 aa12.44□□□□□ -0.42
NOD1-201ENST00000222823 ZNF233A6NK53 670 aa12.44□□□□□ -0.42
NOD1-201ENST00000222823 GOLGA8JA6NMD2 632 aa12.44□□□□□ -0.42
NOD1-201ENST00000222823 CTIFO43310 598 aaKnown RBP12.44□□□□□ -0.42
NOD1-201ENST00000222823 ECEL1O95672 775 aa12.44□□□□□ -0.42
NOD1-201ENST00000222823 INHBAP08476 426 aa12.44□□□□□ -0.42
NOD1-201ENST00000222823 ARHGAP4P98171 946 aa12.44□□□□□ -0.42
NOD1-201ENST00000222823 ITKQ08881 620 aa12.44□□□□□ -0.42
NOD1-201ENST00000222823 CCDC38Q502W7 563 aa12.44□□□□□ -0.42
NOD1-201ENST00000222823 CYP4F22Q6NT55 531 aa12.44□□□□□ -0.42
NOD1-201ENST00000222823 FBXO38Q6PIJ6 1188 aa12.44□□□□□ -0.42
NOD1-201ENST00000222823 RFX6Q8HWS3 928 aa12.44□□□□□ -0.42
NOD1-201ENST00000222823 MXD3Q9BW11 206 aa12.44□□□□□ -0.42
NOD1-201ENST00000222823 PVALEFA0A1B0GWK0 134 aa12.44□□□□□ -0.42
NOD1-201ENST00000222823 OSTNP61366 133 aa12.44□□□□□ -0.42
NOD1-201ENST00000222823 DHX9Q08211 1270 aaKnown RBP12.44□□□□□ -0.42
NOD1-201ENST00000222823 AP5M1Q9H0R1 490 aa12.44□□□□□ -0.42
NOD1-201ENST00000222823 FBXO2Q9UK22 296 aaPredicted RBP12.44□□□□□ -0.42
NOD1-201ENST00000222823 LGALS16A8MUM7 142 aa12.44□□□□□ -0.42
NOD1-201ENST00000222823 PDE1BQ01064 536 aa12.44□□□□□ -0.42
NOD1-201ENST00000222823 C2orf54Q08AI8 447 aa12.44□□□□□ -0.42
NOD1-201ENST00000222823 LRRC8CQ8TDW0 803 aa12.44□□□□□ -0.42
NOD1-201ENST00000222823 FAM20AQ96MK3 541 aa12.44□□□□□ -0.42
NOD1-201ENST00000222823 CFAP57Q96MR6 1250 aa12.44□□□□□ -0.42
NOD1-201ENST00000222823 NUF2Q9BZD4 464 aa12.44□□□□□ -0.42
NOD1-201ENST00000222823 LTN1O94822 1766 aa12.44□□□□□ -0.42
NOD1-201ENST00000222823 TRIM49BA6NDI0 452 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 KCNQ2O43526 872 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 CD58P19256 250 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 GUCY1A2P33402 732 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 PRCPP42785 496 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 CCT5P48643 541 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 TXNRD1Q16881 649 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 RSPH3Q86UC2 560 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 RMDN3Q96TC7 470 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 CALN1Q9BXU9 219 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 EPB41L4AQ9HCS5 686 aaPredicted RBP12.43□□□□□ -0.42
NOD1-201ENST00000222823 MROH7-TTC4A0A0A0MT08 1334 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 SALL1Q9NSC2 1324 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 RGPD1P0DJD0 1748 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 RGPD8O14715 1765 aaPredicted RBP12.43□□□□□ -0.42
NOD1-201ENST00000222823 USP17L10C9JJH3 530 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 Q3C1V9 767 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 TTC19Q6DKK2 380 aaPredicted RBP12.43□□□□□ -0.42
NOD1-201ENST00000222823 RNF10Q8N5U6 811 aaKnown RBP12.43□□□□□ -0.42
NOD1-201ENST00000222823 ANKRD7Q92527 254 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 KIF1AQ12756 1690 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 F5H6K3 240 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 LPXNO60711 386 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 SRGAP2CP0DJJ0 459 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 SAT1P21673 171 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 KLRC3Q07444 240 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 E4F1Q66K89 784 aaPredicted RBP12.43□□□□□ -0.42
NOD1-201ENST00000222823 ZBTB33Q86T24 672 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 CCDC68Q9H2F9 335 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms