RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Fam196bQ6GQV1 535 aa14.09□□□□□ -0.15
Nup88-203ENSMUST00000108531 Psmd5Q8BJY1 504 aa14.09□□□□□ -0.15
Nup88-203ENSMUST00000108531 Sgsm1Q8BPQ7 1093 aa14.09□□□□□ -0.15
Nup88-203ENSMUST00000108531 Bhmt2Q91WS4 363 aa14.09□□□□□ -0.15
Nup88-203ENSMUST00000108531 Dqx1Q924H9 718 aa14.09□□□□□ -0.15
Nup88-203ENSMUST00000108531 Ergic2Q9CR89 377 aa14.09□□□□□ -0.15
Nup88-203ENSMUST00000108531 Lrp2bpQ9D4C6 346 aa14.09□□□□□ -0.15
Nup88-203ENSMUST00000108531 Krt36B1AQ75 473 aa14.09□□□□□ -0.15
Nup88-203ENSMUST00000108531 Zfp213E9QAW0 468 aa14.09□□□□□ -0.15
Nup88-203ENSMUST00000108531 Mroh9G5E8L9 891 aa14.09□□□□□ -0.15
Nup88-203ENSMUST00000108531 EporP14753 507 aa14.09□□□□□ -0.15
Nup88-203ENSMUST00000108531 Rpl13P47963 211 aaKnown RBP14.09□□□□□ -0.15
Nup88-203ENSMUST00000108531 Meis2P97367 477 aa14.09□□□□□ -0.15
Nup88-203ENSMUST00000108531 Sox13Q04891 613 aa14.09□□□□□ -0.15
Nup88-203ENSMUST00000108531 Fbln1Q08879 705 aa14.09□□□□□ -0.15
Nup88-203ENSMUST00000108531 Gdpd4Q3TT99 632 aa14.09□□□□□ -0.15
Nup88-203ENSMUST00000108531 Lrrc36Q3V0M2 755 aa14.09□□□□□ -0.15
Nup88-203ENSMUST00000108531 Krt31Q61765 416 aa14.09□□□□□ -0.15
Nup88-203ENSMUST00000108531 Ehbp1Q69ZW3 1231 aa14.09□□□□□ -0.15
Nup88-203ENSMUST00000108531 Gga2Q6P5E6 603 aa14.09□□□□□ -0.15
Nup88-203ENSMUST00000108531 Zic5Q7TQ40 622 aa14.09□□□□□ -0.15
Nup88-203ENSMUST00000108531 IarsQ8BU30 1262 aa14.09□□□□□ -0.15
Nup88-203ENSMUST00000108531 Ccdc134Q8C7V8 229 aa14.09□□□□□ -0.15
Nup88-203ENSMUST00000108531 Gkap1Q9JMB0 366 aa14.09□□□□□ -0.15
Nup88-203ENSMUST00000108531 Cog1Q9Z160 980 aa14.09□□□□□ -0.15
Nup88-203ENSMUST00000108531 Serpina1bP22599 413 aa14.08□□□□□ -0.15
Nup88-203ENSMUST00000108531 RelaQ04207 549 aa14.08□□□□□ -0.15
Nup88-203ENSMUST00000108531 Cul4aQ3TCH7 759 aa14.08□□□□□ -0.15
Nup88-203ENSMUST00000108531 E2f5Q61502 335 aa14.08□□□□□ -0.15
Nup88-203ENSMUST00000108531 BC048507Q80ZS7 89 aa14.08□□□□□ -0.15
Nup88-203ENSMUST00000108531 Tmx4Q8C0L0 335 aa14.08□□□□□ -0.15
Nup88-203ENSMUST00000108531 Ccdc28aQ8CEI3 192 aa14.08□□□□□ -0.15
Nup88-203ENSMUST00000108531 Scyl2Q8CFE4 930 aa14.08□□□□□ -0.15
Nup88-203ENSMUST00000108531 PdxkQ8K183 312 aa14.08□□□□□ -0.15
Nup88-203ENSMUST00000108531 Chn1Q91V57 459 aa14.08□□□□□ -0.15
Nup88-203ENSMUST00000108531 Slc5a5Q99PN0 618 aa14.08□□□□□ -0.15
Nup88-203ENSMUST00000108531 Usp31E9Q6Y8 1344 aa14.08□□□□□ -0.15
Nup88-203ENSMUST00000108531 Ubr3Q5U430 1889 aa14.08□□□□□ -0.16
Nup88-203ENSMUST00000108531 Ltbp1Q8CG19 1712 aa14.08□□□□□ -0.16
Nup88-203ENSMUST00000108531 Klrg2Q3UM83 387 aa14.08□□□□□ -0.16
Nup88-203ENSMUST00000108531 R3hdm2Q80TM6 1044 aaKnown RBP14.08□□□□□ -0.16
Nup88-203ENSMUST00000108531 Riox2Q8CD15 465 aa14.08□□□□□ -0.16
Nup88-203ENSMUST00000108531 ArpinQ9D0A3 226 aa14.08□□□□□ -0.16
Nup88-203ENSMUST00000108531 Galnt15Q9D2N8 638 aa14.08□□□□□ -0.16
Nup88-203ENSMUST00000108531 Rasgef1cQ9D300 466 aa14.08□□□□□ -0.16
Nup88-203ENSMUST00000108531 Eif2ak1Q9Z2R9 619 aa14.08□□□□□ -0.16
Nup88-203ENSMUST00000108531 Zfp646Q6NV66 1788 aa14.08□□□□□ -0.16
Nup88-203ENSMUST00000108531 Xirp1O70373 1129 aa14.07□□□□□ -0.16
Nup88-203ENSMUST00000108531 Tagap1P0CAX8 505 aa14.07□□□□□ -0.16
Nup88-203ENSMUST00000108531 Ctnna1P26231 906 aaKnown RBP14.07□□□□□ -0.16
Nup88-203ENSMUST00000108531 Eme2Q56A04 373 aa14.07□□□□□ -0.16
Nup88-203ENSMUST00000108531 FdxrQ61578 494 aa14.07□□□□□ -0.16
Nup88-203ENSMUST00000108531 Fgfr1opQ66JX5 399 aa14.07□□□□□ -0.16
Nup88-203ENSMUST00000108531 Zdhhc24Q6IR37 284 aa14.07□□□□□ -0.16
Nup88-203ENSMUST00000108531 Calcoco1Q8CGU1 691 aa14.07□□□□□ -0.16
Nup88-203ENSMUST00000108531 Yipf1Q91VU1 306 aa14.07□□□□□ -0.16
Nup88-203ENSMUST00000108531 Senp2Q91ZX6 588 aa14.07□□□□□ -0.16
Nup88-203ENSMUST00000108531 MycbpQ9EQS3 103 aa14.07□□□□□ -0.16
Nup88-203ENSMUST00000108531 Col11a2Q64739 1736 aa14.07□□□□□ -0.16
Nup88-203ENSMUST00000108531 Ogfod1Q3U0K8 545 aa14.07□□□□□ -0.16
Nup88-203ENSMUST00000108531 Vmn1r209Q5NC97 312 aa14.07□□□□□ -0.16
Nup88-203ENSMUST00000108531 Arhgap44Q5SSM3 814 aa14.07□□□□□ -0.16
Nup88-203ENSMUST00000108531 Krt15Q61414 452 aa14.07□□□□□ -0.16
Nup88-203ENSMUST00000108531 Pick1Q62083 416 aa14.07□□□□□ -0.16
Nup88-203ENSMUST00000108531 Npdc1Q64322 332 aa14.07□□□□□ -0.16
Nup88-203ENSMUST00000108531 Wdr44Q6NVE8 915 aa14.07□□□□□ -0.16
Nup88-203ENSMUST00000108531 Tmc3Q7TQ69 1130 aa14.07□□□□□ -0.16
Nup88-203ENSMUST00000108531 E330017A01RikQ8BU47 192 aa14.07□□□□□ -0.16
Nup88-203ENSMUST00000108531 SucoQ8C341 1250 aa14.07□□□□□ -0.16
Nup88-203ENSMUST00000108531 Ces4aQ8R0W5 563 aa14.07□□□□□ -0.16
Nup88-203ENSMUST00000108531 Cgref1Q8R1U2 281 aa14.07□□□□□ -0.16
Nup88-203ENSMUST00000108531 Oxnad1Q8VE38 311 aa14.07□□□□□ -0.16
Nup88-203ENSMUST00000108531 Dhx58Q99J87 678 aa14.07□□□□□ -0.16
Nup88-203ENSMUST00000108531 Tsnaxip1Q99P25 704 aa14.07□□□□□ -0.16
Nup88-203ENSMUST00000108531 Gm28036V9GXJ1 658 aa14.07□□□□□ -0.16
Nup88-203ENSMUST00000108531 Fam129cD3YZB0 591 aa14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Ncf2O70145 525 aa14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Mucl2P02815 138 aa14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Znf367Q0VDT2 340 aa14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Pcsk7Q61139 770 aa14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Ptger2Q62053 362 aa14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Pja2Q80U04 707 aa14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Znf18Q810A1 556 aa14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Cnot10Q8BH15 744 aa14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 DcakdQ8BHC4 231 aaKnown RBP14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Znf771Q8BJ90 317 aa14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Phf20Q8BLG0 1010 aaKnown RBP14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Fam228aQ8CDW1 299 aa14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Depdc1aQ8CIG0 804 aa14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Dr1Q91WV0 176 aa14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Lztr1Q9CQ33 837 aa14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Zcrb1Q9CZ96 217 aaKnown RBP14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Actn2Q9JI91 894 aa14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Tnip1Q9WUU8 647 aa14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Gfpt2Q9Z2Z9 682 aa14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Col5a2Q3U962 1497 aa14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 4930523C07RikE9Q2T4 99 aa14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Samd15F6XZJ7 620 aa14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Flt3Q00342 1000 aa14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Sorbs1Q62417 1290 aa14.06□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms