RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W AYR1P40471 297 aa3.64□□□□□ -1.83
ECM16YMR128W GAB1P41733 394 aa3.64□□□□□ -1.83
ECM16YMR128W GAT1P43574 510 aa3.64□□□□□ -1.83
ECM16YMR128W SSY5P47002 699 aa3.64□□□□□ -1.83
ECM16YMR128W GTO1P48239 356 aa3.64□□□□□ -1.83
ECM16YMR128W BUD9P53226 547 aa3.64□□□□□ -1.83
ECM16YMR128W MRPL50P53724 139 aa3.64□□□□□ -1.83
ECM16YMR128W ZRG17P53735 605 aa3.64□□□□□ -1.83
ECM16YMR128W RRP45Q05636 305 aaKnown RBP3.64□□□□□ -1.83
ECM16YMR128W SMF3Q12078 473 aaPredicted RBP3.64□□□□□ -1.83
ECM16YMR128W YPR1Q12458 312 aa3.64□□□□□ -1.83
ECM16YMR128W CAP2P13517 287 aa3.64□□□□□ -1.83
ECM16YMR128W NCP1P16603 691 aaKnown RBP3.64□□□□□ -1.83
ECM16YMR128W JEN1P36035 616 aa3.64□□□□□ -1.83
ECM16YMR128W ARA1P38115 344 aa3.64□□□□□ -1.83
ECM16YMR128W SRP72P38688 640 aaKnown RBP3.64□□□□□ -1.83
ECM16YMR128W YAP1801P38856 637 aa3.64□□□□□ -1.83
ECM16YMR128W GDI1P39958 451 aaKnown RBP3.64□□□□□ -1.83
ECM16YMR128W ALG8P40351 577 aa3.64□□□□□ -1.83
ECM16YMR128W TIR3P40552 269 aa3.64□□□□□ -1.83
ECM16YMR128W YJL218WP40892 196 aaKnown RBP3.64□□□□□ -1.83
ECM16YMR128W PAM16P42949 149 aa3.64□□□□□ -1.83
ECM16YMR128W DLD2P46681 530 aaKnown RBP3.64□□□□□ -1.83
ECM16YMR128W COG1P53079 417 aa3.64□□□□□ -1.83
ECM16YMR128W AIM14P53109 570 aa3.64□□□□□ -1.83
ECM16YMR128W VPS73P53142 486 aaKnown RBP3.64□□□□□ -1.83
ECM16YMR128W MPC1P53157 130 aaKnown RBP3.64□□□□□ -1.83
ECM16YMR128W VAC7P53950 1165 aa3.64□□□□□ -1.83
ECM16YMR128W YMD8Q03697 442 aa3.64□□□□□ -1.83
ECM16YMR128W ARX1Q03862 593 aaKnown RBP3.64□□□□□ -1.83
ECM16YMR128W LRS4Q04087 347 aaKnown RBP3.64□□□□□ -1.83
ECM16YMR128W NEJ1Q06148 342 aa3.64□□□□□ -1.83
ECM16YMR128W MFG1Q07684 458 aa3.64□□□□□ -1.83
ECM16YMR128W HAL9Q12180 1030 aa3.64□□□□□ -1.83
ECM16YMR128W YDL199CQ12407 687 aa3.64□□□□□ -1.83
ECM16YMR128W STT4P37297 1900 aa3.63□□□□□ -1.83
ECM16YMR128W CDC21P06785 304 aa3.63□□□□□ -1.83
ECM16YMR128W BST1P43571 1029 aa3.63□□□□□ -1.83
ECM16YMR128W RPS12P48589 143 aaKnown RBP3.63□□□□□ -1.83
ECM16YMR128W NAS6P50086 228 aa3.63□□□□□ -1.83
ECM16YMR128W IDP3P53982 420 aaKnown RBP3.63□□□□□ -1.83
ECM16YMR128W HBT1Q07653 1046 aaKnown RBP3.63□□□□□ -1.83
ECM16YMR128W ATP14Q12349 124 aa3.63□□□□□ -1.83
ECM16YMR128W PET494P07390 489 aaPredicted RBP3.63□□□□□ -1.83
ECM16YMR128W UNG1P12887 359 aa3.63□□□□□ -1.83
ECM16YMR128W CYS3P31373 394 aaKnown RBP3.63□□□□□ -1.83
ECM16YMR128W NDC1P32500 655 aa3.63□□□□□ -1.83
ECM16YMR128W SEC17P32602 292 aa3.63□□□□□ -1.83
ECM16YMR128W TKL2P33315 681 aa3.63□□□□□ -1.83
ECM16YMR128W THI80P35202 319 aa3.63□□□□□ -1.83
ECM16YMR128W ATG7P38862 630 aa3.63□□□□□ -1.83
ECM16YMR128W PEX7P39108 375 aa3.63□□□□□ -1.83
ECM16YMR128W SPO73P40031 143 aa3.63□□□□□ -1.83
ECM16YMR128W BFA1P47113 574 aa3.63□□□□□ -1.83
ECM16YMR128W LSG1P53145 640 aaKnown RBP3.63□□□□□ -1.83
ECM16YMR128W RBG2P53295 368 aaKnown RBP3.63□□□□□ -1.83
ECM16YMR128W MOT3P54785 490 aaKnown RBP3.63□□□□□ -1.83
ECM16YMR128W DID2P69771 204 aa3.63□□□□□ -1.83
ECM16YMR128W MTD1Q02046 320 aaKnown RBP3.63□□□□□ -1.83
ECM16YMR128W SIA1Q12212 622 aa3.63□□□□□ -1.83
ECM16YMR128W DCC1P25559 380 aa3.63□□□□□ -1.83
ECM16YMR128W RPS1AP33442 255 aaKnown RBP3.63□□□□□ -1.83
ECM16YMR128W NET1P47035 1189 aa3.63□□□□□ -1.83
ECM16YMR128W FRE4P53746 719 aa3.63□□□□□ -1.83
ECM16YMR128W NOP13P53883 403 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
ECM16YMR128W MPS1P54199 764 aa3.63□□□□□ -1.83
ECM16YMR128W NHP10Q03435 203 aa3.63□□□□□ -1.83
ECM16YMR128W RCR2Q03446 210 aaKnown RBP3.63□□□□□ -1.83
ECM16YMR128W PHO92Q06390 306 aa3.63□□□□□ -1.83
ECM16YMR128W RRG7Q08774 242 aaPredicted RBP3.63□□□□□ -1.83
ECM16YMR128W PST1Q12355 444 aa3.63□□□□□ -1.83
ECM16YMR128W MHT1Q12525 324 aa3.63□□□□□ -1.83
ECM16YMR128W YGL194C-AQ2V2P6 80 aa3.63□□□□□ -1.83
ECM16YMR128W TAH1P25638 111 aaPredicted RBP3.62□□□□□ -1.83
ECM16YMR128W ERG9P29704 444 aa3.62□□□□□ -1.83
ECM16YMR128W YHL026CP38740 315 aa3.62□□□□□ -1.83
ECM16YMR128W CCT6P39079 546 aa3.62□□□□□ -1.83
ECM16YMR128W YER034WP40022 185 aaKnown RBP3.62□□□□□ -1.83
ECM16YMR128W NEO1P40527 1151 aa3.62□□□□□ -1.83
ECM16YMR128W MTR3P48240 250 aaPredicted RBP3.62□□□□□ -1.83
ECM16YMR128W AMA1P50082 593 aa3.62□□□□□ -1.83
ECM16YMR128W FMP48P53233 369 aa3.62□□□□□ -1.83
ECM16YMR128W SYF2P53277 215 aaPredicted RBP3.62□□□□□ -1.83
ECM16YMR128W IGO1P53897 168 aa3.62□□□□□ -1.83
ECM16YMR128W YPL071CQ02864 156 aa3.62□□□□□ -1.83
ECM16YMR128W PIR3Q03180 325 aa3.62□□□□□ -1.83
ECM16YMR128W YDR109CQ04585 715 aa3.62□□□□□ -1.83
ECM16YMR128W MFB1Q04922 465 aa3.62□□□□□ -1.83
ECM16YMR128W GRX8Q05926 109 aa3.62□□□□□ -1.83
ECM16YMR128W DCS1Q06151 350 aa3.62□□□□□ -1.83
ECM16YMR128W HRK1Q08732 759 aaKnown RBP3.62□□□□□ -1.83
ECM16YMR128W FRE5Q08908 694 aa3.62□□□□□ -1.83
ECM16YMR128W PNS1Q12412 539 aa3.62□□□□□ -1.83
ECM16YMR128W ATG31Q12421 196 aa3.62□□□□□ -1.83
ECM16YMR128W GAL1P04385 528 aa3.62□□□□□ -1.83
ECM16YMR128W GAL80P04387 435 aa3.62□□□□□ -1.83
ECM16YMR128W GAL3P13045 520 aa3.62□□□□□ -1.83
ECM16YMR128W AAR2P32357 355 aaPredicted RBP3.62□□□□□ -1.83
ECM16YMR128W RPC34P32910 317 aa3.62□□□□□ -1.83
ECM16YMR128W ARC19P33204 171 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 54.8 ms