RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 PRR23D2P0DMB1 279 aaPredicted RBP11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 ERFP50548 548 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 PPP2R5BQ15173 497 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 KIF19Q2TAC6 998 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 PYROXD1Q8WU10 500 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 RUBCNQ92622 972 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 TRIM63Q969Q1 353 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 TRIM8Q9BZR9 551 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 MID2Q9UJV3 735 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 TRIM33Q9UPN9 1127 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 SUPT6HQ7KZ85 1726 aaKnown RBP11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 RPRD2Q5VT52 1461 aaKnown RBP11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 CCDC22O60826 627 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 FGGP02679 453 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 ATP1A3P13637 1013 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 LSP1P33241 339 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 TFAP4Q01664 338 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 ACAD11Q709F0 780 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 SMYD4Q8IYR2 804 aaPredicted RBP11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 SH2D3CQ8N5H7 860 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 OSBPL5Q9H0X9 879 aaPredicted RBP11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 CCDC134Q9H6E4 229 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 VCPKMTQ9H867 229 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 CCPG1Q9ULG6 757 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 C6orf229H3BNL8 230 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 SMAPO00193 183 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 FOXO3O43524 673 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 VCPP55072 806 aaKnown RBP11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 CC2D2BQ6DHV5 1058 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 PCGF5Q86SE9 256 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 FLAD1Q8NFF5 587 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 XAGE3Q8WTP9 111 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 CSRNP1Q96S65 589 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 RAD21L1Q9H4I0 556 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 TAF1DQ9H5J8 278 aaPredicted RBP11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 ZMYND8Q9ULU4 1186 aaPredicted RBP11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 DIS3Q9Y2L1 958 aaKnown RBP11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 ESYT3A0FGR9 886 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 MAPK4P31152 587 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 KPNA2P52292 529 aaKnown RBP11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 DSG1Q02413 1049 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 NEK8Q86SG6 692 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 GPBP1Q86WP2 473 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 COG4Q9H9E3 785 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 PARVGQ9HBI0 331 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 SAYSD1Q9NPB0 183 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 RWDD2AQ9UIY3 292 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 CHD1O14646 1710 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 CHN1P15882 459 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 SLC20A2Q08357 652 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 APOA5Q6Q788 366 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 LUZP2Q86TE4 346 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 PACS2Q86VP3 889 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 NCLNQ969V3 563 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 BTBD6Q96KE9 485 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 MRPS26Q9BYN8 205 aaKnown RBP11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 KCNF1Q9H3M0 494 aa11.7□□□□□ -0.54
KCNMA1-259ENST00000639406 LPXNO60711 386 aa11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 MARK3P27448 753 aa11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 PICALMQ13492 652 aa11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 EXOC8Q8IYI6 725 aa11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 METTL14Q9HCE5 456 aaKnown RBP11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 CCDC195A0A1B0GUA6 201 aa11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 TMEM191CA6NGB0 347 aa11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 PALMO75781 387 aa11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 TMEM191BP0C7N4 346 aa11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 ITGB3BPQ13352 177 aaPredicted RBP11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 SLC39A14Q15043 492 aa11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 NMD3Q96D46 503 aaKnown RBP11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 USP40Q9NVE5 1235 aa11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 KDM3AQ9Y4C1 1321 aa11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 C16orf96A6NNT2 1141 aa11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 PDHBP11177 359 aa11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 IGBP1P78318 339 aa11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 PRAMEP78395 509 aa11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 PTH1RQ03431 593 aa11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 SIX6OS1Q8N1H7 587 aa11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 DHTKD1Q96HY7 919 aaPredicted RBP11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 M0R3G1 203 aa11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 ENO1P06733 434 aaKnown RBP11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 ADCY7P51828 1080 aa11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 SFSWAPQ12872 951 aaKnown RBP11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 ZNF658Q5TYW1 1059 aaPredicted RBP11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 DDI1Q8WTU0 396 aa11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 PRPF18Q99633 342 aaKnown RBP11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 KIF17Q9P2E2 1029 aa11.69□□□□□ -0.54
KCNMA1-259ENST00000639406 GRID2IPA4D2P6 1211 aa11.68□□□□□ -0.54
KCNMA1-259ENST00000639406 BACH1O14867 736 aa11.68□□□□□ -0.54
KCNMA1-259ENST00000639406 ATP6V1B1P15313 513 aa11.68□□□□□ -0.54
KCNMA1-259ENST00000639406 BBS9Q3SYG4 887 aa11.68□□□□□ -0.54
KCNMA1-259ENST00000639406 TRIM67Q6ZTA4 783 aa11.68□□□□□ -0.54
KCNMA1-259ENST00000639406 MOV10L1Q9BXT6 1211 aaKnown RBP11.68□□□□□ -0.54
KCNMA1-259ENST00000639406 HDAC6Q9UBN7 1215 aa11.68□□□□□ -0.54
KCNMA1-259ENST00000639406 PRKAG2Q9UGJ0 569 aa11.68□□□□□ -0.54
KCNMA1-259ENST00000639406 FBXL5Q9UKA1 691 aa11.68□□□□□ -0.54
KCNMA1-259ENST00000639406 WDR7Q9Y4E6 1490 aa11.68□□□□□ -0.54
KCNMA1-259ENST00000639406 STRNO43815 780 aa11.68□□□□□ -0.54
KCNMA1-259ENST00000639406 TNNI1P19237 187 aa11.68□□□□□ -0.54
KCNMA1-259ENST00000639406 YWHAEP62258 255 aaKnown RBP11.68□□□□□ -0.54
KCNMA1-259ENST00000639406 CTDSPL2Q05D32 466 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms