RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 FAM160B1Q5W0V3 765 aa21.56■■□□□ 1.04
CLN6-213ENST00000636212 PLPPR4Q7Z2D5 763 aa21.56■■□□□ 1.04
CLN6-213ENST00000636212 ARNTL2Q8WYA1 636 aa21.56■■□□□ 1.04
CLN6-213ENST00000636212 ZNF274Q96GC6 653 aaPredicted RBP21.56■■□□□ 1.04
CLN6-213ENST00000636212 CERS4Q9HA82 394 aa21.56■■□□□ 1.04
CLN6-213ENST00000636212 NCOA5Q9HCD5 579 aaKnown RBP21.56■■□□□ 1.04
CLN6-213ENST00000636212 SH3GLB2Q9NR46 395 aa21.56■■□□□ 1.04
CLN6-213ENST00000636212 PDRG1Q9NUG6 133 aa21.56■■□□□ 1.04
CLN6-213ENST00000636212 DDX39AO00148 427 aaKnown RBP21.55■■□□□ 1.04
CLN6-213ENST00000636212 BACH1O14867 736 aa21.55■■□□□ 1.04
CLN6-213ENST00000636212 NLRP5P59047 1200 aa21.55■■□□□ 1.04
CLN6-213ENST00000636212 CCDC85BQ15834 202 aaPredicted RBP21.55■■□□□ 1.04
CLN6-213ENST00000636212 FAM26DQ5JW98 314 aa21.55■■□□□ 1.04
CLN6-213ENST00000636212 FAM117BQ6P1L5 589 aa21.55■■□□□ 1.04
CLN6-213ENST00000636212 RPAINQ86UA6 219 aa21.55■■□□□ 1.04
CLN6-213ENST00000636212 MYOCDQ8IZQ8 938 aa21.55■■□□□ 1.04
CLN6-213ENST00000636212 ZNF577Q9BSK1 485 aa21.55■■□□□ 1.04
CLN6-213ENST00000636212 TBC1D22BQ9NU19 505 aa21.55■■□□□ 1.04
CLN6-213ENST00000636212 KAT6AQ92794 2004 aa21.55■■□□□ 1.04
CLN6-213ENST00000636212 M0QZ92 97 aa21.54■■□□□ 1.04
CLN6-213ENST00000636212 IPO5O00410 1097 aaKnown RBP21.54■■□□□ 1.04
CLN6-213ENST00000636212 PPFIA3O75145 1194 aa21.54■■□□□ 1.04
CLN6-213ENST00000636212 INSRRP14616 1297 aa21.54■■□□□ 1.04
CLN6-213ENST00000636212 ITGB3BPQ13352 177 aaPredicted RBP21.54■■□□□ 1.04
CLN6-213ENST00000636212 TCTN1Q2MV58 587 aa21.54■■□□□ 1.04
CLN6-213ENST00000636212 TMCO2Q7Z6W1 182 aaPredicted RBP21.54■■□□□ 1.04
CLN6-213ENST00000636212 MICALL1Q8N3F8 863 aa21.54■■□□□ 1.04
CLN6-213ENST00000636212 SYMPKQ92797 1274 aaKnown RBP21.54■■□□□ 1.04
CLN6-213ENST00000636212 IFIH1Q9BYX4 1025 aaKnown RBP21.54■■□□□ 1.04
CLN6-213ENST00000636212 C22orf23Q9BZE7 217 aa21.54■■□□□ 1.04
CLN6-213ENST00000636212 UPF3BQ9BZI7 483 aaKnown RBP21.54■■□□□ 1.04
CLN6-213ENST00000636212 VPS54Q9P1Q0 977 aa21.54■■□□□ 1.04
CLN6-213ENST00000636212 INSL6Q9Y581 213 aa21.54■■□□□ 1.04
CLN6-213ENST00000636212 MBLAC1A4D2B0 266 aaPredicted RBP21.53■■□□□ 1.04
CLN6-213ENST00000636212 FAM86B1E9PN63 330 aa21.53■■□□□ 1.04
CLN6-213ENST00000636212 DEXIO95424 95 aa21.53■■□□□ 1.04
CLN6-213ENST00000636212 FAM86B2P0C5J1 330 aa21.53■■□□□ 1.04
CLN6-213ENST00000636212 IER5Q5VY09 327 aa21.53■■□□□ 1.04
CLN6-213ENST00000636212 MIS18BP1Q6P0N0 1132 aa21.53■■□□□ 1.04
CLN6-213ENST00000636212 RUFY4Q6ZNE9 571 aa21.53■■□□□ 1.04
CLN6-213ENST00000636212 USP38Q8NB14 1042 aa21.53■■□□□ 1.04
CLN6-213ENST00000636212 PCYT2Q99447 389 aa21.53■■□□□ 1.04
CLN6-213ENST00000636212 POTEB3A0JP26 581 aa21.52■■□□□ 1.04
CLN6-213ENST00000636212 CDKL5O76039 1030 aa21.52■■□□□ 1.04
CLN6-213ENST00000636212 ATG7O95352 703 aa21.52■■□□□ 1.04
CLN6-213ENST00000636212 STK3Q13188 491 aa21.52■■□□□ 1.04
CLN6-213ENST00000636212 PLCB4Q15147 1175 aa21.52■■□□□ 1.04
CLN6-213ENST00000636212 POTEBQ6S5H4 581 aa21.52■■□□□ 1.04
CLN6-213ENST00000636212 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.52■■□□□ 1.04
CLN6-213ENST00000636212 DNAJB3Q8WWF6 145 aa21.52■■□□□ 1.04
CLN6-213ENST00000636212 ZNF302Q9NR11 478 aa21.52■■□□□ 1.04
CLN6-213ENST00000636212 IGLV3-22A0A075B6J6 115 aa21.51■■□□□ 1.03
CLN6-213ENST00000636212 PRR16Q569H4 304 aa21.51■■□□□ 1.03
CLN6-213ENST00000636212 MARCH8Q5T0T0 291 aa21.51■■□□□ 1.03
CLN6-213ENST00000636212 FAM177A1Q8N128 213 aaPredicted RBP21.51■■□□□ 1.03
CLN6-213ENST00000636212 RASGRP4Q8TDF6 673 aa21.51■■□□□ 1.03
CLN6-213ENST00000636212 CRYGNQ8WXF5 182 aa21.51■■□□□ 1.03
CLN6-213ENST00000636212 TGS1Q96RS0 853 aaKnown RBP21.51■■□□□ 1.03
CLN6-213ENST00000636212 FAM49AQ9H0Q0 323 aaPredicted RBP21.51■■□□□ 1.03
CLN6-213ENST00000636212 THEGQ9P2T0 379 aa21.51■■□□□ 1.03
CLN6-213ENST00000636212 LCHNA4D1U4 455 aa21.5■■□□□ 1.03
CLN6-213ENST00000636212 RFXAPO00287 272 aa21.5■■□□□ 1.03
CLN6-213ENST00000636212 HBP1O60381 514 aa21.5■■□□□ 1.03
CLN6-213ENST00000636212 CHRNA1P02708 482 aa21.5■■□□□ 1.03
CLN6-213ENST00000636212 GHRP10912 638 aa21.5■■□□□ 1.03
CLN6-213ENST00000636212 MRPS6P82932 125 aaKnown RBP21.5■■□□□ 1.03
CLN6-213ENST00000636212 KRT76Q01546 638 aa21.5■■□□□ 1.03
CLN6-213ENST00000636212 ZNF746Q6NUN9 644 aaPredicted RBP21.5■■□□□ 1.03
CLN6-213ENST00000636212 PDXDC2PQ6P474 469 aa21.5■■□□□ 1.03
CLN6-213ENST00000636212 ABHD15Q6UXT9 468 aa21.5■■□□□ 1.03
CLN6-213ENST00000636212 CKAP2LQ8IYA6 745 aa21.5■■□□□ 1.03
CLN6-213ENST00000636212 SMAP1Q8IYB5 467 aaPredicted RBP21.5■■□□□ 1.03
CLN6-213ENST00000636212 YME1L1Q96TA2 773 aa21.5■■□□□ 1.03
CLN6-213ENST00000636212 LARP6Q9BRS8 491 aaKnown RBP21.5■■□□□ 1.03
CLN6-213ENST00000636212 COL25A1Q9BXS0 654 aaPredicted RBP21.5■■□□□ 1.03
CLN6-213ENST00000636212 SAMM50Q9Y512 469 aa21.5■■□□□ 1.03
CLN6-213ENST00000636212 PCDHA2Q9Y5H9 948 aa21.5■■□□□ 1.03
CLN6-213ENST00000636212 CDY2AQ9Y6F7 541 aa21.5■■□□□ 1.03
CLN6-213ENST00000636212 PTPRSQ13332 1948 aa21.5■■□□□ 1.03
CLN6-213ENST00000636212 IGKV6D-21A0A0A0MT36 114 aa21.49■■□□□ 1.03
CLN6-213ENST00000636212 UPP2O95045 317 aa21.49■■□□□ 1.03
CLN6-213ENST00000636212 CCNE2O96020 404 aa21.49■■□□□ 1.03
CLN6-213ENST00000636212 PSAPP07602 524 aa21.49■■□□□ 1.03
CLN6-213ENST00000636212 XBP1P17861 261 aa21.49■■□□□ 1.03
CLN6-213ENST00000636212 POU3F3P20264 500 aaPredicted RBP21.49■■□□□ 1.03
CLN6-213ENST00000636212 CIITAP33076 1130 aa21.49■■□□□ 1.03
CLN6-213ENST00000636212 USP11P51784 963 aa21.49■■□□□ 1.03
CLN6-213ENST00000636212 ANAPC15P60006 121 aa21.49■■□□□ 1.03
CLN6-213ENST00000636212 ANKRD1Q15327 319 aa21.49■■□□□ 1.03
CLN6-213ENST00000636212 SKIV2LQ15477 1246 aaKnown RBP21.49■■□□□ 1.03
CLN6-213ENST00000636212 SWSAP1Q6NVH7 229 aa21.49■■□□□ 1.03
CLN6-213ENST00000636212 IL27Q8NEV9 243 aa21.49■■□□□ 1.03
CLN6-213ENST00000636212 ATXN2LQ8WWM7 1075 aaKnown RBP21.49■■□□□ 1.03
CLN6-213ENST00000636212 SLKQ9H2G2 1235 aaPredicted RBP21.49■■□□□ 1.03
CLN6-213ENST00000636212 PCDHA4Q9UN74 947 aa21.49■■□□□ 1.03
CLN6-213ENST00000636212 LINC01553A4QN01 128 aa21.48■■□□□ 1.03
CLN6-213ENST00000636212 DHX15O43143 795 aaKnown RBP21.48■■□□□ 1.03
CLN6-213ENST00000636212 ARHGEF15O94989 841 aa21.48■■□□□ 1.03
CLN6-213ENST00000636212 MGAT3Q09327 533 aa21.48■■□□□ 1.03
CLN6-213ENST00000636212 TJAP1Q5JTD0 557 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms