RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 ARID5BQ14865 1188 aa23.82■■□□□ 1.4
SPAST-204ENST00000621856 NR1I3Q14994 352 aa23.82■■□□□ 1.4
SPAST-204ENST00000621856 STXBP2Q15833 593 aa23.82■■□□□ 1.4
SPAST-204ENST00000621856 CENPPQ6IPU0 288 aa23.82■■□□□ 1.4
SPAST-204ENST00000621856 RINT1Q6NUQ1 792 aa23.82■■□□□ 1.4
SPAST-204ENST00000621856 ZSWIM4Q9H7M6 989 aa23.82■■□□□ 1.4
SPAST-204ENST00000621856 TXNRD2Q9NNW7 524 aa23.82■■□□□ 1.4
SPAST-204ENST00000621856 ADD3Q9UEY8 706 aaKnown RBP23.82■■□□□ 1.4
SPAST-204ENST00000621856 WDR64B1ANS9 1081 aa23.81■■□□□ 1.4
SPAST-204ENST00000621856 ZBTB39O15060 712 aa23.81■■□□□ 1.4
SPAST-204ENST00000621856 SFNP31947 248 aa23.81■■□□□ 1.4
SPAST-204ENST00000621856 ALDH5A1P51649 535 aaPredicted RBP23.81■■□□□ 1.4
SPAST-204ENST00000621856 GTF2A2P52657 109 aa23.81■■□□□ 1.4
SPAST-204ENST00000621856 PTPN21Q16825 1174 aa23.81■■□□□ 1.4
SPAST-204ENST00000621856 LRRC8AQ8IWT6 810 aa23.81■■□□□ 1.4
SPAST-204ENST00000621856 CCDC150Q8NCX0 1101 aa23.81■■□□□ 1.4
SPAST-204ENST00000621856 GLIS3Q8NEA6 775 aa23.81■■□□□ 1.4
SPAST-204ENST00000621856 TSG101Q99816 390 aa23.81■■□□□ 1.4
SPAST-204ENST00000621856 RTN4Q9NQC3 1192 aaKnown RBP23.81■■□□□ 1.4
SPAST-204ENST00000621856 TAB2Q9NYJ8 693 aa23.81■■□□□ 1.4
SPAST-204ENST00000621856 ARHGEF35A5YM69 484 aa23.81■■□□□ 1.4
SPAST-204ENST00000621856 QARSP47897 775 aaKnown RBP23.81■■□□□ 1.4
SPAST-204ENST00000621856 COPB1P53618 953 aaKnown RBP23.81■■□□□ 1.4
SPAST-204ENST00000621856 FAM114A1Q8IWE2 563 aa23.81■■□□□ 1.4
SPAST-204ENST00000621856 RGS20O76081 388 aa23.8■■□□□ 1.4
SPAST-204ENST00000621856 EEF1GP26641 437 aaKnown RBP23.8■■□□□ 1.4
SPAST-204ENST00000621856 SFR1Q86XK3 245 aa23.8■■□□□ 1.4
SPAST-204ENST00000621856 IRF2BP1Q8IU81 584 aa23.8■■□□□ 1.4
SPAST-204ENST00000621856 NMRK2Q9NPI5 230 aa23.8■■□□□ 1.4
SPAST-204ENST00000621856 PCDHA2Q9Y5H9 948 aa23.8■■□□□ 1.4
SPAST-204ENST00000621856 CCL15-CCL14A0A0B4J2E2 113 aa23.79■■□□□ 1.4
SPAST-204ENST00000621856 N4BP3O15049 544 aa23.79■■□□□ 1.4
SPAST-204ENST00000621856 EIF3JO75822 258 aaKnown RBP23.79■■□□□ 1.4
SPAST-204ENST00000621856 KIF20AO95235 890 aa23.79■■□□□ 1.4
SPAST-204ENST00000621856 CCNE2O96020 404 aa23.79■■□□□ 1.4
SPAST-204ENST00000621856 KCNA2P16389 499 aa23.79■■□□□ 1.4
SPAST-204ENST00000621856 LRRC63Q05C16 580 aa23.79■■□□□ 1.4
SPAST-204ENST00000621856 CCL15Q16663 113 aa23.79■■□□□ 1.4
SPAST-204ENST00000621856 Q3C1V9 767 aa23.79■■□□□ 1.4
SPAST-204ENST00000621856 ZNF746Q6NUN9 644 aaPredicted RBP23.79■■□□□ 1.4
SPAST-204ENST00000621856 C1orf186Q6ZWK4 172 aa23.79■■□□□ 1.4
SPAST-204ENST00000621856 ZNF526Q8TF50 670 aaPredicted RBP23.79■■□□□ 1.4
SPAST-204ENST00000621856 GTF3C2Q8WUA4 911 aaPredicted RBP23.79■■□□□ 1.4
SPAST-204ENST00000621856 VPS16Q9H269 839 aa23.79■■□□□ 1.4
SPAST-204ENST00000621856 PYCARDQ9ULZ3 195 aa23.79■■□□□ 1.4
SPAST-204ENST00000621856 COL4A3BPQ9Y5P4 624 aa23.79■■□□□ 1.4
SPAST-204ENST00000621856 ASTN1O14525 1302 aa23.79■■□□□ 1.4
SPAST-204ENST00000621856 RSPH10B2B2RC85 870 aa23.79■■□□□ 1.4
SPAST-204ENST00000621856 TEX33O43247 280 aa23.79■■□□□ 1.4
SPAST-204ENST00000621856 ZNF500O60304 480 aaPredicted RBP23.79■■□□□ 1.4
SPAST-204ENST00000621856 FAM13AO94988 1023 aa23.79■■□□□ 1.4
SPAST-204ENST00000621856 RSPH10BP0C881 870 aa23.79■■□□□ 1.4
SPAST-204ENST00000621856 CYP2C8P10632 490 aa23.79■■□□□ 1.4
SPAST-204ENST00000621856 GAP43P17677 238 aa23.79■■□□□ 1.4
SPAST-204ENST00000621856 WDR78Q5VTH9 848 aa23.79■■□□□ 1.4
SPAST-204ENST00000621856 SPECC1LQ69YQ0 1117 aa23.79■■□□□ 1.4
SPAST-204ENST00000621856 RDM1Q8NG50 284 aa23.79■■□□□ 1.4
SPAST-204ENST00000621856 FGFBP2Q9BYJ0 223 aa23.79■■□□□ 1.4
SPAST-204ENST00000621856 NFASCO94856 1347 aa23.78■■□□□ 1.4
SPAST-204ENST00000621856 DOCK5Q9H7D0 1870 aa23.78■■□□□ 1.4
SPAST-204ENST00000621856 SOWAHBA6NEL2 793 aa23.78■■□□□ 1.4
SPAST-204ENST00000621856 SPATA31C2B4DYI2 1134 aa23.78■■□□□ 1.4
SPAST-204ENST00000621856 PDHXO00330 501 aa23.78■■□□□ 1.4
SPAST-204ENST00000621856 FGFR1OPO95684 399 aaKnown RBP23.78■■□□□ 1.4
SPAST-204ENST00000621856 SFPQP23246 707 aaKnown RBP eCLIP23.78■■□□□ 1.4
SPAST-204ENST00000621856 SMCR8Q8TEV9 937 aaPredicted RBP23.78■■□□□ 1.4
SPAST-204ENST00000621856 MS4A4AQ96JQ5 239 aa23.78■■□□□ 1.4
SPAST-204ENST00000621856 MMP19Q99542 508 aa23.78■■□□□ 1.4
SPAST-204ENST00000621856 SENP7Q9BQF6 1050 aa23.78■■□□□ 1.4
SPAST-204ENST00000621856 KCND2Q9NZV8 630 aa23.78■■□□□ 1.4
SPAST-204ENST00000621856 DCAF8L1A6NGE4 600 aa23.77■■□□□ 1.4
SPAST-204ENST00000621856 LRRC10BA6NIK2 292 aa23.77■■□□□ 1.4
SPAST-204ENST00000621856 CLCN1P35523 988 aa23.77■■□□□ 1.4
SPAST-204ENST00000621856 PSMC5P62195 406 aa23.77■■□□□ 1.4
SPAST-204ENST00000621856 ERVK-9P63128 1117 aa23.77■■□□□ 1.4
SPAST-204ENST00000621856 ERVK-24P63145 666 aa23.77■■□□□ 1.4
SPAST-204ENST00000621856 NELFCDQ8IXH7 590 aa23.77■■□□□ 1.4
SPAST-204ENST00000621856 FAM133AQ8N9E0 248 aa23.77■■□□□ 1.4
SPAST-204ENST00000621856 CNOT6LQ96LI5 555 aaKnown RBP23.77■■□□□ 1.4
SPAST-204ENST00000621856 CCDC43Q96MW1 224 aaKnown RBP23.77■■□□□ 1.4
SPAST-204ENST00000621856 R3HDMLQ9H3Y0 253 aa23.77■■□□□ 1.4
SPAST-204ENST00000621856 MROH8Q9H579 483 aa23.77■■□□□ 1.4
SPAST-204ENST00000621856 B4DLN1 442 aa23.76■■□□□ 1.39
SPAST-204ENST00000621856 BTBD19C9JJ37 291 aa23.76■■□□□ 1.39
SPAST-204ENST00000621856 LYPLA2O95372 231 aa23.76■■□□□ 1.39
SPAST-204ENST00000621856 TPM2P07951 284 aa23.76■■□□□ 1.39
SPAST-204ENST00000621856 FSTL1Q12841 308 aa23.76■■□□□ 1.39
SPAST-204ENST00000621856 KCTD2Q14681 263 aa23.76■■□□□ 1.39
SPAST-204ENST00000621856 UGCGQ16739 394 aa23.76■■□□□ 1.39
SPAST-204ENST00000621856 ARMCX5Q6P1M9 558 aa23.76■■□□□ 1.39
SPAST-204ENST00000621856 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.76■■□□□ 1.39
SPAST-204ENST00000621856 EEF2KMTQ96G04 330 aa23.76■■□□□ 1.39
SPAST-204ENST00000621856 MPHOSPH6Q99547 160 aaKnown RBP23.76■■□□□ 1.39
SPAST-204ENST00000621856 POLD4Q9HCU8 107 aa23.76■■□□□ 1.39
SPAST-204ENST00000621856 JPH1Q9HDC5 661 aaPredicted RBP23.76■■□□□ 1.39
SPAST-204ENST00000621856 DBR1Q9UK59 544 aaKnown RBP23.76■■□□□ 1.39
SPAST-204ENST00000621856 SLC45A1Q9Y2W3 748 aa23.76■■□□□ 1.39
SPAST-204ENST00000621856 PCDHA10Q9Y5I2 948 aa23.76■■□□□ 1.39
SPAST-204ENST00000621856 SEPT14Q6ZU15 432 aa23.76■■□□□ 1.39
SPAST-204ENST00000621856 C4orf19Q8IY42 314 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms