RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 CHD7Q9P2D1 2997 aa19.55■□□□□ 0.72
HMGN3-203ENST00000620514 IGLV3-22A0A075B6J6 115 aa19.55■□□□□ 0.72
HMGN3-203ENST00000620514 CCNE2O96020 404 aa19.55■□□□□ 0.72
HMGN3-203ENST00000620514 CYP3A4P08684 503 aa19.55■□□□□ 0.72
HMGN3-203ENST00000620514 IGBP1P78318 339 aa19.55■□□□□ 0.72
HMGN3-203ENST00000620514 MKRN4PQ13434 485 aaPredicted RBP19.55■□□□□ 0.72
HMGN3-203ENST00000620514 CCDC85BQ15834 202 aaPredicted RBP19.55■□□□□ 0.72
HMGN3-203ENST00000620514 FAM26DQ5JW98 314 aa19.55■□□□□ 0.72
HMGN3-203ENST00000620514 MARCH8Q5T0T0 291 aa19.55■□□□□ 0.72
HMGN3-203ENST00000620514 NIPA1Q7RTP0 329 aa19.55■□□□□ 0.72
HMGN3-203ENST00000620514 REXO1Q8N1G1 1221 aaKnown RBP19.55■□□□□ 0.72
HMGN3-203ENST00000620514 ZBED2Q9BTP6 218 aa19.55■□□□□ 0.72
HMGN3-203ENST00000620514 UNC80Q8N2C7 3258 aa19.55■□□□□ 0.72
HMGN3-203ENST00000620514 KAT6AQ92794 2004 aa19.54■□□□□ 0.72
HMGN3-203ENST00000620514 EFCAB14O75071 495 aa19.54■□□□□ 0.72
HMGN3-203ENST00000620514 GJB5O95377 273 aa19.54■□□□□ 0.72
HMGN3-203ENST00000620514 INSRRP14616 1297 aa19.54■□□□□ 0.72
HMGN3-203ENST00000620514 GNA11P29992 359 aa19.54■□□□□ 0.72
HMGN3-203ENST00000620514 STK3Q13188 491 aa19.54■□□□□ 0.72
HMGN3-203ENST00000620514 ERICH6BQ5W0A0 696 aa19.54■□□□□ 0.72
HMGN3-203ENST00000620514 ARNTL2Q8WYA1 636 aa19.54■□□□□ 0.72
HMGN3-203ENST00000620514 SEPT8Q92599 483 aa19.54■□□□□ 0.72
HMGN3-203ENST00000620514 AZI2Q9H6S1 392 aa19.54■□□□□ 0.72
HMGN3-203ENST00000620514 PDRG1Q9NUG6 133 aa19.54■□□□□ 0.72
HMGN3-203ENST00000620514 TUBE1Q9UJT0 475 aa19.54■□□□□ 0.72
HMGN3-203ENST00000620514 A0A0C4DFX4 3053 aa19.53■□□□□ 0.72
HMGN3-203ENST00000620514 MBLAC1A4D2B0 266 aaPredicted RBP19.53■□□□□ 0.72
HMGN3-203ENST00000620514 DHX15O43143 795 aaKnown RBP19.53■□□□□ 0.72
HMGN3-203ENST00000620514 ATG7O95352 703 aa19.53■□□□□ 0.72
HMGN3-203ENST00000620514 CHRNA1P02708 482 aa19.53■□□□□ 0.72
HMGN3-203ENST00000620514 STAT5BP51692 787 aa19.53■□□□□ 0.72
HMGN3-203ENST00000620514 PLCB4Q15147 1175 aa19.53■□□□□ 0.72
HMGN3-203ENST00000620514 TRAPPC12Q8WVT3 735 aa19.53■□□□□ 0.72
HMGN3-203ENST00000620514 DNAJB3Q8WWF6 145 aa19.53■□□□□ 0.72
HMGN3-203ENST00000620514 ZNF274Q96GC6 653 aaPredicted RBP19.53■□□□□ 0.72
HMGN3-203ENST00000620514 COL25A1Q9BXS0 654 aaPredicted RBP19.53■□□□□ 0.72
HMGN3-203ENST00000620514 TRPC6Q9Y210 931 aa19.53■□□□□ 0.72
HMGN3-203ENST00000620514 PRUNE2Q8WUY3 3088 aa19.53■□□□□ 0.72
HMGN3-203ENST00000620514 MICAL3Q7RTP6 2002 aa19.52■□□□□ 0.72
HMGN3-203ENST00000620514 EDIL3O43854 480 aa19.52■□□□□ 0.72
HMGN3-203ENST00000620514 SSRP1Q08945 709 aaKnown RBP19.52■□□□□ 0.72
HMGN3-203ENST00000620514 MGAT3Q09327 533 aa19.52■□□□□ 0.72
HMGN3-203ENST00000620514 MCTP2Q6DN12 878 aa19.52■□□□□ 0.72
HMGN3-203ENST00000620514 TAF2Q6P1X5 1199 aa19.52■□□□□ 0.72
HMGN3-203ENST00000620514 PLPPR4Q7Z2D5 763 aa19.52■□□□□ 0.72
HMGN3-203ENST00000620514 RPAINQ86UA6 219 aa19.52■□□□□ 0.72
HMGN3-203ENST00000620514 MYOCDQ8IZQ8 938 aa19.52■□□□□ 0.72
HMGN3-203ENST00000620514 MICALL1Q8N3F8 863 aa19.52■□□□□ 0.72
HMGN3-203ENST00000620514 CCDC148Q8NFR7 591 aa19.52■□□□□ 0.72
HMGN3-203ENST00000620514 RAD9AQ99638 391 aa19.52■□□□□ 0.72
HMGN3-203ENST00000620514 IGKV6D-21A0A0A0MT36 114 aa19.51■□□□□ 0.71
HMGN3-203ENST00000620514 IPO5O00410 1097 aaKnown RBP19.51■□□□□ 0.71
HMGN3-203ENST00000620514 AMHP03971 560 aa19.51■□□□□ 0.71
HMGN3-203ENST00000620514 GHRP10912 638 aa19.51■□□□□ 0.71
HMGN3-203ENST00000620514 KRT40Q6A162 431 aa19.51■□□□□ 0.71
HMGN3-203ENST00000620514 ABHD15Q6UXT9 468 aa19.51■□□□□ 0.71
HMGN3-203ENST00000620514 TRIM22Q8IYM9 498 aa19.51■□□□□ 0.71
HMGN3-203ENST00000620514 BICD2Q8TD16 824 aa19.51■□□□□ 0.71
HMGN3-203ENST00000620514 ZNF577Q9BSK1 485 aa19.51■□□□□ 0.71
HMGN3-203ENST00000620514 FAM49AQ9H0Q0 323 aaPredicted RBP19.51■□□□□ 0.71
HMGN3-203ENST00000620514 SIP14410 1827 aa19.51■□□□□ 0.71
HMGN3-203ENST00000620514 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.5■□□□□ 0.71
HMGN3-203ENST00000620514 RRN3P2A6NIE6 340 aa19.5■□□□□ 0.71
HMGN3-203ENST00000620514 CPLX1O14810 134 aa19.5■□□□□ 0.71
HMGN3-203ENST00000620514 NLRP5P59047 1200 aa19.5■□□□□ 0.71
HMGN3-203ENST00000620514 PRR16Q569H4 304 aa19.5■□□□□ 0.71
HMGN3-203ENST00000620514 RSPH3Q86UC2 560 aa19.5■□□□□ 0.71
HMGN3-203ENST00000620514 CCDC60Q8IWA6 550 aaPredicted RBP19.5■□□□□ 0.71
HMGN3-203ENST00000620514 AIFM3Q96NN9 605 aa19.5■□□□□ 0.71
HMGN3-203ENST00000620514 IFIH1Q9BYX4 1025 aaKnown RBP19.5■□□□□ 0.71
HMGN3-203ENST00000620514 SH3GLB2Q9NR46 395 aa19.5■□□□□ 0.71
HMGN3-203ENST00000620514 MTCH2Q9Y6C9 303 aa19.5■□□□□ 0.71
HMGN3-203ENST00000620514 CDY2AQ9Y6F7 541 aa19.5■□□□□ 0.71
HMGN3-203ENST00000620514 POTEB3A0JP26 581 aa19.49■□□□□ 0.71
HMGN3-203ENST00000620514 LINC01553A4QN01 128 aa19.49■□□□□ 0.71
HMGN3-203ENST00000620514 BACH1O14867 736 aa19.49■□□□□ 0.71
HMGN3-203ENST00000620514 DTNBO60941 627 aa19.49■□□□□ 0.71
HMGN3-203ENST00000620514 CIITAP33076 1130 aa19.49■□□□□ 0.71
HMGN3-203ENST00000620514 SETQ01105 290 aaPredicted RBP19.49■□□□□ 0.71
HMGN3-203ENST00000620514 LPIN1Q14693 890 aa19.49■□□□□ 0.71
HMGN3-203ENST00000620514 POTEBQ6S5H4 581 aa19.49■□□□□ 0.71
HMGN3-203ENST00000620514 LENG9Q96B70 501 aa19.49■□□□□ 0.71
HMGN3-203ENST00000620514 MTUS1Q9ULD2 1270 aa19.49■□□□□ 0.71
HMGN3-203ENST00000620514 LPXNO60711 386 aa19.48■□□□□ 0.71
HMGN3-203ENST00000620514 DEXIO95424 95 aa19.48■□□□□ 0.71
HMGN3-203ENST00000620514 MRPS6P82932 125 aaKnown RBP19.48■□□□□ 0.71
HMGN3-203ENST00000620514 GRB10Q13322 594 aa19.48■□□□□ 0.71
HMGN3-203ENST00000620514 FAM160B1Q5W0V3 765 aa19.48■□□□□ 0.71
HMGN3-203ENST00000620514 SWSAP1Q6NVH7 229 aa19.48■□□□□ 0.71
HMGN3-203ENST00000620514 MIS18BP1Q6P0N0 1132 aa19.48■□□□□ 0.71
HMGN3-203ENST00000620514 APBB2Q92870 758 aa19.48■□□□□ 0.71
HMGN3-203ENST00000620514 ZNF302Q9NR11 478 aa19.48■□□□□ 0.71
HMGN3-203ENST00000620514 PCDHA2Q9Y5H9 948 aa19.48■□□□□ 0.71
HMGN3-203ENST00000620514 CUL9Q8IWT3 2517 aa19.47■□□□□ 0.71
HMGN3-203ENST00000620514 UPP2O95045 317 aa19.47■□□□□ 0.71
HMGN3-203ENST00000620514 POU3F3P20264 500 aaPredicted RBP19.47■□□□□ 0.71
HMGN3-203ENST00000620514 ATP4AP20648 1035 aa19.47■□□□□ 0.71
HMGN3-203ENST00000620514 HTRA4P83105 476 aaPredicted RBP19.47■□□□□ 0.71
HMGN3-203ENST00000620514 TMEM62Q0P6H9 643 aa19.47■□□□□ 0.71
HMGN3-203ENST00000620514 SCRN1Q12765 414 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms