RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 MECP2P51608 486 aaKnown RBP7.4□□□□□ -1.22
SCAMP1-205ENST00000614488 GJA9P57773 515 aa7.4□□□□□ -1.22
SCAMP1-205ENST00000614488 ZNF460Q14592 562 aa7.4□□□□□ -1.22
SCAMP1-205ENST00000614488 ARHGAP44Q17R89 818 aa7.4□□□□□ -1.22
SCAMP1-205ENST00000614488 TKFCQ3LXA3 575 aa7.4□□□□□ -1.22
SCAMP1-205ENST00000614488 PRAMEF18Q5VWM3 479 aa7.4□□□□□ -1.22
SCAMP1-205ENST00000614488 C2orf69Q8N8R5 385 aa7.4□□□□□ -1.22
SCAMP1-205ENST00000614488 SYT8Q8NBV8 401 aa7.4□□□□□ -1.22
SCAMP1-205ENST00000614488 ZCCHC14Q8WYQ9 949 aaKnown RBP7.4□□□□□ -1.22
SCAMP1-205ENST00000614488 NINJ1Q92982 152 aa7.4□□□□□ -1.22
SCAMP1-205ENST00000614488 BOCQ9BWV1 1114 aa7.4□□□□□ -1.22
SCAMP1-205ENST00000614488 KCNH7Q9NS40 1196 aa7.4□□□□□ -1.22
SCAMP1-205ENST00000614488 CROTQ9UKG9 612 aa7.4□□□□□ -1.22
SCAMP1-205ENST00000614488 PLAAQ9Y263 795 aa7.4□□□□□ -1.22
SCAMP1-205ENST00000614488 B3GALT1Q9Y5Z6 326 aa7.4□□□□□ -1.22
SCAMP1-205ENST00000614488 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.39□□□□□ -1.23
SCAMP1-205ENST00000614488 PRAMEF25A6NGN4 478 aa7.39□□□□□ -1.23
SCAMP1-205ENST00000614488 OTOL1A6NHN0 477 aaPredicted RBP7.39□□□□□ -1.23
SCAMP1-205ENST00000614488 C9orf118A6NHY6 69 aa7.39□□□□□ -1.23
SCAMP1-205ENST00000614488 M0R2C6 588 aa7.39□□□□□ -1.23
SCAMP1-205ENST00000614488 DDX3XO00571 662 aaKnown RBP eCLIP7.39□□□□□ -1.239e-11■■■■■ 54
SCAMP1-205ENST00000614488 KCNK3O14649 394 aa7.39□□□□□ -1.23
SCAMP1-205ENST00000614488 NOBOXO60393 691 aa7.39□□□□□ -1.23
SCAMP1-205ENST00000614488 GLRX3O76003 335 aaKnown RBP7.39□□□□□ -1.23
SCAMP1-205ENST00000614488 MLLT6P55198 1093 aaPredicted RBP7.39□□□□□ -1.23
SCAMP1-205ENST00000614488 NT5DC1Q5TFE4 455 aa7.39□□□□□ -1.23
SCAMP1-205ENST00000614488 FRMD5Q7Z6J6 570 aa7.39□□□□□ -1.23
SCAMP1-205ENST00000614488 CHST14Q8NCH0 376 aa7.39□□□□□ -1.23
SCAMP1-205ENST00000614488 DLG3Q92796 817 aa7.39□□□□□ -1.23
SCAMP1-205ENST00000614488 YTHDC1Q96MU7 727 aaKnown RBP7.39□□□□□ -1.23
SCAMP1-205ENST00000614488 L2HGDHQ9H9P8 463 aa7.39□□□□□ -1.23
SCAMP1-205ENST00000614488 KCND1Q9NSA2 647 aa7.39□□□□□ -1.23
SCAMP1-205ENST00000614488 RTEL1Q9NZ71 1219 aa7.39□□□□□ -1.23
SCAMP1-205ENST00000614488 ARHGAP20Q9P2F6 1191 aa7.39□□□□□ -1.23
SCAMP1-205ENST00000614488 SCDO00767 359 aa7.38□□□□□ -1.23
SCAMP1-205ENST00000614488 HIP1RO75146 1068 aa7.38□□□□□ -1.23
SCAMP1-205ENST00000614488 COL6A1P12109 1028 aa7.38□□□□□ -1.23
SCAMP1-205ENST00000614488 AOAHP28039 575 aa7.38□□□□□ -1.23
SCAMP1-205ENST00000614488 SDHAP31040 664 aa7.38□□□□□ -1.23
SCAMP1-205ENST00000614488 IL13P35225 146 aa7.38□□□□□ -1.23
SCAMP1-205ENST00000614488 SEC23AQ15436 765 aa7.38□□□□□ -1.23
SCAMP1-205ENST00000614488 SMAD2Q15796 467 aaKnown RBP7.38□□□□□ -1.23
SCAMP1-205ENST00000614488 RGL3Q3MIN7 710 aa7.38□□□□□ -1.23
SCAMP1-205ENST00000614488 CPZQ66K79 652 aa7.38□□□□□ -1.23
SCAMP1-205ENST00000614488 UBE2R2Q712K3 238 aaPredicted RBP7.38□□□□□ -1.23
SCAMP1-205ENST00000614488 KIAA0907Q7Z7F0 614 aaPredicted RBP7.38□□□□□ -1.23
SCAMP1-205ENST00000614488 TXNDC5Q8NBS9 432 aaKnown RBP7.38□□□□□ -1.23
SCAMP1-205ENST00000614488 USP40Q9NVE5 1235 aa7.38□□□□□ -1.23
SCAMP1-205ENST00000614488 ARHGAP28Q9P2N2 729 aa7.38□□□□□ -1.23
SCAMP1-205ENST00000614488 ZFP69BQ9UJL9 534 aa7.38□□□□□ -1.23
SCAMP1-205ENST00000614488 FBXO21O94952 628 aa7.37□□□□□ -1.23
SCAMP1-205ENST00000614488 PTGS1P23219 599 aa7.37□□□□□ -1.23
SCAMP1-205ENST00000614488 IRF9Q00978 393 aa7.37□□□□□ -1.23
SCAMP1-205ENST00000614488 FSTL4Q6MZW2 842 aa7.37□□□□□ -1.23
SCAMP1-205ENST00000614488 TRMT10BQ6PF06 316 aaKnown RBP7.37□□□□□ -1.23
SCAMP1-205ENST00000614488 NIM1KQ8IY84 436 aa7.37□□□□□ -1.23
SCAMP1-205ENST00000614488 TEPSINQ96N21 525 aa7.37□□□□□ -1.23
SCAMP1-205ENST00000614488 ORAI3Q9BRQ5 295 aa7.37□□□□□ -1.23
SCAMP1-205ENST00000614488 CABP5Q9NP86 173 aa7.37□□□□□ -1.23
SCAMP1-205ENST00000614488 SLC39A2Q9NP94 309 aa7.37□□□□□ -1.23
SCAMP1-205ENST00000614488 BTBD7Q9P203 1132 aa7.37□□□□□ -1.23
SCAMP1-205ENST00000614488 FTSJ1Q9UET6 329 aa7.37□□□□□ -1.23
SCAMP1-205ENST00000614488 A0A0G2JLL6 359 aaPredicted RBP7.36□□□□□ -1.23
SCAMP1-205ENST00000614488 KNG1P01042 644 aa7.36□□□□□ -1.23
SCAMP1-205ENST00000614488 JMJD7P0C870 316 aa7.36□□□□□ -1.23
SCAMP1-205ENST00000614488 ZBTB48P10074 688 aaPredicted RBP7.36□□□□□ -1.23
SCAMP1-205ENST00000614488 POU3F2P20265 443 aaPredicted RBP7.36□□□□□ -1.23
SCAMP1-205ENST00000614488 KIAA2012Q0VF49 1180 aa7.36□□□□□ -1.23
SCAMP1-205ENST00000614488 TM4SF20Q53R12 229 aa7.36□□□□□ -1.23
SCAMP1-205ENST00000614488 PLEKHG4Q58EX7 1191 aa7.36□□□□□ -1.23
SCAMP1-205ENST00000614488 PIK3R6Q5UE93 754 aa7.36□□□□□ -1.23
SCAMP1-205ENST00000614488 MCTP2Q6DN12 878 aa7.36□□□□□ -1.23
SCAMP1-205ENST00000614488 FAM124AQ86V42 546 aa7.36□□□□□ -1.23
SCAMP1-205ENST00000614488 LCORQ96JN0 433 aaPredicted RBP7.36□□□□□ -1.23
SCAMP1-205ENST00000614488 TMEM168Q9H0V1 697 aa7.36□□□□□ -1.23
SCAMP1-205ENST00000614488 TMA7Q9Y2S6 64 aaKnown RBP7.36□□□□□ -1.23
SCAMP1-205ENST00000614488 TLDC2A0PJX2 215 aa7.35□□□□□ -1.23
SCAMP1-205ENST00000614488 MROH6A6NGR9 719 aa7.35□□□□□ -1.23
SCAMP1-205ENST00000614488 CBX4O00257 560 aa7.35□□□□□ -1.23
SCAMP1-205ENST00000614488 IL18BPO95998 194 aa7.35□□□□□ -1.23
SCAMP1-205ENST00000614488 CYP1A1P04798 512 aaPredicted RBP7.35□□□□□ -1.23
SCAMP1-205ENST00000614488 GLRBP48167 497 aa7.35□□□□□ -1.23
SCAMP1-205ENST00000614488 CFAP100Q494V2 611 aa7.35□□□□□ -1.23
SCAMP1-205ENST00000614488 ZFYVE27Q5T4F4 411 aa7.35□□□□□ -1.23
SCAMP1-205ENST00000614488 PHF19Q5T6S3 580 aa7.35□□□□□ -1.23
SCAMP1-205ENST00000614488 CDCA2Q69YH5 1023 aaPredicted RBP7.35□□□□□ -1.23
SCAMP1-205ENST00000614488 CC2D1AQ6P1N0 951 aaPredicted RBP7.35□□□□□ -1.23
SCAMP1-205ENST00000614488 PKN3Q6P5Z2 889 aa7.35□□□□□ -1.23
SCAMP1-205ENST00000614488 LRRTM3Q86VH5 581 aa7.35□□□□□ -1.23
SCAMP1-205ENST00000614488 MFSD3Q96ES6 412 aa7.35□□□□□ -1.23
SCAMP1-205ENST00000614488 WNK4Q96J92 1243 aa7.35□□□□□ -1.23
SCAMP1-205ENST00000614488 INCENPQ9NQS7 918 aa7.35□□□□□ -1.23
SCAMP1-205ENST00000614488 B4GALT6Q9UBX8 382 aa7.35□□□□□ -1.23
SCAMP1-205ENST00000614488 ASB1Q9Y576 335 aa7.35□□□□□ -1.23
SCAMP1-205ENST00000614488 TRAF5O00463 557 aa7.34□□□□□ -1.23
SCAMP1-205ENST00000614488 FOXP2O15409 715 aa7.34□□□□□ -1.23
SCAMP1-205ENST00000614488 KLHL18O94889 574 aa7.34□□□□□ -1.23
SCAMP1-205ENST00000614488 MMEP08473 750 aa7.34□□□□□ -1.23
SCAMP1-205ENST00000614488 DALRD3Q5D0E6 543 aaKnown RBP7.34□□□□□ -1.23
SCAMP1-205ENST00000614488 LCE4AQ5TA78 99 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms