RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 RNF207Q6ZRF8 634 aa13.55□□□□□ -0.24
TNFAIP3-206ENST00000612899 SFR1Q86XK3 245 aa13.55□□□□□ -0.24
TNFAIP3-206ENST00000612899 C7orf31Q8N865 590 aa13.55□□□□□ -0.24
TNFAIP3-206ENST00000612899 DCAF4Q8WV16 495 aa13.55□□□□□ -0.24
TNFAIP3-206ENST00000612899 IL25Q9H293 177 aa13.55□□□□□ -0.24
TNFAIP3-206ENST00000612899 KLHL14Q9P2G3 628 aa13.55□□□□□ -0.24
TNFAIP3-206ENST00000612899 ZNF609O15014 1411 aa13.55□□□□□ -0.24
TNFAIP3-206ENST00000612899 ECE2O60344 883 aa13.55□□□□□ -0.24
TNFAIP3-206ENST00000612899 GMNNO75496 209 aa13.55□□□□□ -0.24
TNFAIP3-206ENST00000612899 EPHB4P54760 987 aa13.55□□□□□ -0.24
TNFAIP3-206ENST00000612899 TPD52P55327 224 aaPredicted RBP13.55□□□□□ -0.24
TNFAIP3-206ENST00000612899 SGO2Q562F6 1265 aa13.55□□□□□ -0.24
TNFAIP3-206ENST00000612899 MAP7D3Q8IWC1 876 aa13.55□□□□□ -0.24
TNFAIP3-206ENST00000612899 ANKRD36BP1Q96IX9 119 aa13.55□□□□□ -0.24
TNFAIP3-206ENST00000612899 PPP1R12CQ9BZL4 782 aa13.55□□□□□ -0.24
TNFAIP3-206ENST00000612899 ALDH8A1Q9H2A2 487 aaPredicted RBP13.55□□□□□ -0.24
TNFAIP3-206ENST00000612899 BARHL2Q9NY43 387 aa13.55□□□□□ -0.24
TNFAIP3-206ENST00000612899 PNPLA7Q6ZV29 1317 aa13.55□□□□□ -0.24
TNFAIP3-206ENST00000612899 LGALS16A8MUM7 142 aa13.55□□□□□ -0.24
TNFAIP3-206ENST00000612899 TROVE2P10155 538 aaKnown RBP eCLIP13.55□□□□□ -0.24
TNFAIP3-206ENST00000612899 CLCN6P51797 869 aa13.55□□□□□ -0.24
TNFAIP3-206ENST00000612899 QRICH1Q2TAL8 776 aa13.55□□□□□ -0.24
TNFAIP3-206ENST00000612899 CLEC17AQ6ZS10 378 aa13.55□□□□□ -0.24
TNFAIP3-206ENST00000612899 TOGARAM2Q6ZUX3 1019 aa13.55□□□□□ -0.24
TNFAIP3-206ENST00000612899 RMDN3Q96TC7 470 aa13.55□□□□□ -0.24
TNFAIP3-206ENST00000612899 TAF6LQ9Y6J9 622 aa13.55□□□□□ -0.24
TNFAIP3-206ENST00000612899 TEX33O43247 280 aa13.54□□□□□ -0.24
TNFAIP3-206ENST00000612899 MARK3P27448 753 aa13.54□□□□□ -0.24
TNFAIP3-206ENST00000612899 SLC7A5Q01650 507 aa13.54□□□□□ -0.24
TNFAIP3-206ENST00000612899 ADCY1Q08828 1119 aa13.54□□□□□ -0.24
TNFAIP3-206ENST00000612899 CYP4F22Q6NT55 531 aa13.54□□□□□ -0.24
TNFAIP3-206ENST00000612899 TMED8Q6PL24 325 aaPredicted RBP13.54□□□□□ -0.24
TNFAIP3-206ENST00000612899 PPP4R3CPQ6ZMV5 832 aa13.54□□□□□ -0.24
TNFAIP3-206ENST00000612899 NEDD1Q8NHV4 660 aa13.54□□□□□ -0.24
TNFAIP3-206ENST00000612899 NSUN4Q96CB9 384 aaKnown RBP13.54□□□□□ -0.24
TNFAIP3-206ENST00000612899 STK38LQ9Y2H1 464 aa13.54□□□□□ -0.24
TNFAIP3-206ENST00000612899 PALM3A6NDB9 673 aaPredicted RBP13.54□□□□□ -0.24
TNFAIP3-206ENST00000612899 TDP2O95551 362 aa13.54□□□□□ -0.24
TNFAIP3-206ENST00000612899 AKR1B1P15121 316 aa13.54□□□□□ -0.24
TNFAIP3-206ENST00000612899 YWHAGP61981 247 aaKnown RBP eCLIP13.54□□□□□ -0.24
TNFAIP3-206ENST00000612899 RPS6KC1Q96S38 1066 aa13.54□□□□□ -0.24
TNFAIP3-206ENST00000612899 FAN1Q9Y2M0 1017 aa13.54□□□□□ -0.24
TNFAIP3-206ENST00000612899 E9PCH4 1651 aa13.54□□□□□ -0.24
TNFAIP3-206ENST00000612899 SGK1O00141 431 aa13.54□□□□□ -0.24
TNFAIP3-206ENST00000612899 PSAPP07602 524 aa13.54□□□□□ -0.24
TNFAIP3-206ENST00000612899 SRBD1Q8N5C6 995 aaKnown RBP13.54□□□□□ -0.24
TNFAIP3-206ENST00000612899 MKRN3Q13064 507 aaKnown RBP13.54□□□□□ -0.24
TNFAIP3-206ENST00000612899 RCSD1Q6JBY9 416 aa13.54□□□□□ -0.24
TNFAIP3-206ENST00000612899 FAM114A2Q9NRY5 505 aa13.54□□□□□ -0.24
TNFAIP3-206ENST00000612899 AFG3L2Q9Y4W6 797 aa13.54□□□□□ -0.24
TNFAIP3-206ENST00000612899 USP42Q9H9J4 1324 aaKnown RBP13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 ORC4O43929 436 aa13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 BBOF1Q8ND07 529 aa13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 NLRP4Q96MN2 994 aa13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 RUNDC3BQ96NL0 473 aa13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 PLA2G12BQ9BX93 195 aa13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 AP1M1Q9BXS5 423 aa13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 RAVER2Q9HCJ3 691 aaKnown RBP13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 RRP15Q9Y3B9 282 aaKnown RBP13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 CAPN7Q9Y6W3 813 aa13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 C1orf167Q5SNV9 1468 aa13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 POTEFA5A3E0 1075 aa13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 A6NJR5 290 aa13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 SH3BP5O60239 455 aa13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 POTEIP0CG38 1075 aa13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 CCT5P48643 541 aa13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 DYNLT1P63172 113 aa13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 APBA1Q02410 837 aa13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 DHX9Q08211 1270 aaKnown RBP13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 C12orf60Q5U649 245 aa13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 POTEGQ6S5H5 508 aa13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 POTEEQ6S8J3 1075 aa13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 TRIM11Q96F44 468 aa13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 ABHD10Q9NUJ1 306 aa13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 RNF14Q9UBS8 474 aa13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 FAM205CA6NFA0 338 aa13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 SAT1P21673 171 aa13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 MTMR1Q13613 665 aa13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 DNAJC24Q6P3W2 148 aa13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 FBXO38Q6PIJ6 1188 aa13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 RFX6Q8HWS3 928 aa13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 BEGAINQ9BUH8 593 aa13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.53□□□□□ -0.24
TNFAIP3-206ENST00000612899 TERF2Q15554 542 aa13.52□□□□□ -0.24
TNFAIP3-206ENST00000612899 ADGRF4Q8IZF3 695 aa13.52□□□□□ -0.24
TNFAIP3-206ENST00000612899 ARHGAP24Q8N264 748 aa13.52□□□□□ -0.24
TNFAIP3-206ENST00000612899 AFAP1L2Q8N4X5 818 aa13.52□□□□□ -0.24
TNFAIP3-206ENST00000612899 INTS9Q9NV88 658 aaKnown RBP13.52□□□□□ -0.24
TNFAIP3-206ENST00000612899 ZHX2Q9Y6X8 837 aa13.52□□□□□ -0.24
TNFAIP3-206ENST00000612899 SETBP1Q9Y6X0 1596 aa13.52□□□□□ -0.24
TNFAIP3-206ENST00000612899 PVALEFA0A1B0GWK0 134 aa13.52□□□□□ -0.24
TNFAIP3-206ENST00000612899 ZNF233A6NK53 670 aa13.52□□□□□ -0.24
TNFAIP3-206ENST00000612899 OSBPP22059 807 aa13.52□□□□□ -0.24
TNFAIP3-206ENST00000612899 LIG3P49916 1009 aa13.52□□□□□ -0.24
TNFAIP3-206ENST00000612899 SPP2Q13103 211 aa13.52□□□□□ -0.24
TNFAIP3-206ENST00000612899 PDZD4Q76G19 769 aaPredicted RBP13.52□□□□□ -0.24
TNFAIP3-206ENST00000612899 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.52□□□□□ -0.24
TNFAIP3-206ENST00000612899 PDLIM2Q96JY6 352 aa13.52□□□□□ -0.24
TNFAIP3-206ENST00000612899 CALN1Q9BXU9 219 aa13.52□□□□□ -0.24
TNFAIP3-206ENST00000612899 OVOS2A0A0G2JMS6 1433 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms