RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 ZNF653Q96CK0 615 aa11.94□□□□□ -0.5
SHANK2-219ENST00000606715 HAUS8Q9BT25 410 aa11.94□□□□□ -0.5
SHANK2-219ENST00000606715 SLIT1O75093 1534 aa11.94□□□□□ -0.5
SHANK2-219ENST00000606715 ARHGAP24Q8N264 748 aa11.94□□□□□ -0.5
SHANK2-219ENST00000606715 MMP19Q99542 508 aa11.94□□□□□ -0.5
SHANK2-219ENST00000606715 DCP1AQ9NPI6 582 aaPredicted RBP11.94□□□□□ -0.5
SHANK2-219ENST00000606715 PRR5LQ6MZQ0 368 aa11.94□□□□□ -0.5
SHANK2-219ENST00000606715 NBPF11Q86T75 865 aa11.94□□□□□ -0.5
SHANK2-219ENST00000606715 ZNF512BQ96KM6 892 aaPredicted RBP11.94□□□□□ -0.5
SHANK2-219ENST00000606715 TMTC3Q6ZXV5 915 aa11.94□□□□□ -0.5
SHANK2-219ENST00000606715 SCN4BQ8IWT1 228 aa11.94□□□□□ -0.5
SHANK2-219ENST00000606715 FAM84BQ96KN1 310 aaPredicted RBP11.94□□□□□ -0.5
SHANK2-219ENST00000606715 HEXIM2Q96MH2 286 aaKnown RBP11.94□□□□□ -0.5
SHANK2-219ENST00000606715 SLC39A2Q9NP94 309 aa11.94□□□□□ -0.5
SHANK2-219ENST00000606715 BCAP29Q9UHQ4 241 aa11.94□□□□□ -0.5
SHANK2-219ENST00000606715 PXDNLA1KZ92 1463 aa11.94□□□□□ -0.5
SHANK2-219ENST00000606715 ACTN1P12814 892 aa11.93□□□□□ -0.5
SHANK2-219ENST00000606715 CASP2P42575 452 aa11.93□□□□□ -0.5
SHANK2-219ENST00000606715 ARHGAP4P98171 946 aa11.93□□□□□ -0.5
SHANK2-219ENST00000606715 ANKRD20A3Q5VUR7 823 aa11.93□□□□□ -0.5
SHANK2-219ENST00000606715 NEK9Q8TD19 979 aa11.93□□□□□ -0.5
SHANK2-219ENST00000606715 ARHGEF2Q92974 986 aaKnown RBP11.93□□□□□ -0.5
SHANK2-219ENST00000606715 ALKBH8Q96BT7 664 aaKnown RBP11.93□□□□□ -0.5
SHANK2-219ENST00000606715 GOLGA8SH3BPF8 625 aa11.93□□□□□ -0.5
SHANK2-219ENST00000606715 SOX5P35711 763 aa11.93□□□□□ -0.5
SHANK2-219ENST00000606715 THOC5Q13769 683 aaKnown RBP11.93□□□□□ -0.5
SHANK2-219ENST00000606715 OR6B2Q6IFH4 312 aa11.93□□□□□ -0.5
SHANK2-219ENST00000606715 VSIG1Q86XK7 387 aa11.93□□□□□ -0.5
SHANK2-219ENST00000606715 LINC00116Q8NCU8 138 aa11.93□□□□□ -0.5
SHANK2-219ENST00000606715 ZNF148Q9UQR1 794 aa11.93□□□□□ -0.5
SHANK2-219ENST00000606715 ORC4O43929 436 aa11.93□□□□□ -0.5
SHANK2-219ENST00000606715 VPS41P49754 854 aa11.93□□□□□ -0.5
SHANK2-219ENST00000606715 TGFB2P61812 414 aa11.93□□□□□ -0.5
SHANK2-219ENST00000606715 TAF1CQ15572 869 aaPredicted RBP11.93□□□□□ -0.5
SHANK2-219ENST00000606715 EZH2Q15910 746 aaKnown RBP11.93□□□□□ -0.5
SHANK2-219ENST00000606715 RUFY4Q6ZNE9 571 aa11.93□□□□□ -0.5
SHANK2-219ENST00000606715 PGBD3Q8N328 593 aa11.93□□□□□ -0.5
SHANK2-219ENST00000606715 DNAAF3Q8N9W5 541 aa11.93□□□□□ -0.5
SHANK2-219ENST00000606715 OR6B3Q8NGW1 331 aa11.93□□□□□ -0.5
SHANK2-219ENST00000606715 TOPORSQ9NS56 1045 aaPredicted RBP11.93□□□□□ -0.5
SHANK2-219ENST00000606715 HGSO14964 777 aaPredicted RBP11.93□□□□□ -0.5
SHANK2-219ENST00000606715 RFC1P35251 1148 aaPredicted RBP11.93□□□□□ -0.5
SHANK2-219ENST00000606715 TTLL4Q14679 1199 aa11.93□□□□□ -0.5
SHANK2-219ENST00000606715 DENND2CQ68D51 928 aa11.93□□□□□ -0.5
SHANK2-219ENST00000606715 HDXQ7Z353 690 aa11.93□□□□□ -0.5
SHANK2-219ENST00000606715 CACNA2D3Q8IZS8 1091 aa11.93□□□□□ -0.5
SHANK2-219ENST00000606715 TBC1D16Q8TBP0 767 aa11.93□□□□□ -0.5
SHANK2-219ENST00000606715 TBC1D22BQ9NU19 505 aa11.93□□□□□ -0.5
SHANK2-219ENST00000606715 ENTPD3O75355 529 aa11.93□□□□□ -0.5
SHANK2-219ENST00000606715 PSMC2P35998 433 aaKnown RBP11.93□□□□□ -0.5
SHANK2-219ENST00000606715 TTC31Q49AM3 519 aaPredicted RBP11.93□□□□□ -0.5
SHANK2-219ENST00000606715 TRMT44Q8IYL2 757 aaKnown RBP11.93□□□□□ -0.5
SHANK2-219ENST00000606715 CEP120Q8N960 986 aa11.93□□□□□ -0.5
SHANK2-219ENST00000606715 RPGRIP1Q96KN7 1286 aa11.93□□□□□ -0.5
SHANK2-219ENST00000606715 SLFN14P0C7P3 912 aa11.92□□□□□ -0.5
SHANK2-219ENST00000606715 FCER1AP12319 257 aa11.92□□□□□ -0.5
SHANK2-219ENST00000606715 EEF1GP26641 437 aaKnown RBP11.92□□□□□ -0.5
SHANK2-219ENST00000606715 ATP11AP98196 1134 aa11.92□□□□□ -0.5
SHANK2-219ENST00000606715 MTMR3Q13615 1198 aa11.92□□□□□ -0.5
SHANK2-219ENST00000606715 ZNF467Q7Z7K2 595 aaPredicted RBP11.92□□□□□ -0.5
SHANK2-219ENST00000606715 RSRC1Q96IZ7 334 aaKnown RBP11.92□□□□□ -0.5
SHANK2-219ENST00000606715 GPR101Q96P66 508 aaPredicted RBP11.92□□□□□ -0.5
SHANK2-219ENST00000606715 SLC13A4Q9UKG4 626 aa11.92□□□□□ -0.5
SHANK2-219ENST00000606715 NVLO15381 856 aaKnown RBP11.92□□□□□ -0.5
SHANK2-219ENST00000606715 GADD45BO75293 160 aaPredicted RBP11.92□□□□□ -0.5
SHANK2-219ENST00000606715 ACBD5Q5T8D3 534 aaPredicted RBP11.92□□□□□ -0.5
SHANK2-219ENST00000606715 CAPN12Q6ZSI9 719 aa11.92□□□□□ -0.5
SHANK2-219ENST00000606715 NSUN6Q8TEA1 469 aaKnown RBP11.92□□□□□ -0.5
SHANK2-219ENST00000606715 MAGED2Q9UNF1 606 aaPredicted RBP11.92□□□□□ -0.5
SHANK2-219ENST00000606715 RGL2O15211 777 aa11.92□□□□□ -0.5
SHANK2-219ENST00000606715 CSF1RP07333 972 aa11.92□□□□□ -0.5
SHANK2-219ENST00000606715 POLR2FP61218 127 aaKnown RBP11.92□□□□□ -0.5
SHANK2-219ENST00000606715 TRIM11Q96F44 468 aa11.92□□□□□ -0.5
SHANK2-219ENST00000606715 ZFYVE28Q9HCC9 887 aa11.92□□□□□ -0.5
SHANK2-219ENST00000606715 NEURL4Q96JN8 1562 aa11.92□□□□□ -0.5
SHANK2-219ENST00000606715 CLCN1P35523 988 aa11.92□□□□□ -0.5
SHANK2-219ENST00000606715 ATP6V1E1P36543 226 aa11.92□□□□□ -0.5
SHANK2-219ENST00000606715 TMEM47Q9BQJ4 181 aa11.92□□□□□ -0.5
SHANK2-219ENST00000606715 DYRK4Q9NR20 520 aa11.92□□□□□ -0.5
SHANK2-219ENST00000606715 RCOR1Q9UKL0 485 aa11.92□□□□□ -0.5
SHANK2-219ENST00000606715 A0A0G2JLW4 131 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 GPC4O75487 556 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 GBP1P32455 592 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 PDE1BQ01064 536 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 PAK2Q13177 524 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 TMCO4Q5TGY1 634 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 SLFN12LQ6IEE8 588 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 SNRNP48Q6IEG0 339 aaKnown RBP11.91□□□□□ -0.5
SHANK2-219ENST00000606715 HHIPL2Q6UWX4 724 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 HVCN1Q96D96 273 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 PCIF1Q9H4Z3 704 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 HPCAL4Q9UM19 191 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 SRPRBQ9Y5M8 271 aaKnown RBP11.91□□□□□ -0.5
SHANK2-219ENST00000606715 CLIC4Q9Y696 253 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 MYO1FO00160 1098 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 YWHAGP61981 247 aaKnown RBP eCLIP11.91□□□□□ -0.5
SHANK2-219ENST00000606715 VEPH1Q14D04 833 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 RWDD4Q6NW29 188 aaKnown RBP11.91□□□□□ -0.5
SHANK2-219ENST00000606715 NEDD1Q8NHV4 660 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 FAM20AQ96MK3 541 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms