RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 F2P00734 622 aa22.49■■□□□ 1.19
SHKBP1-222ENST00000600320 PDIA5Q14554 519 aa22.49■■□□□ 1.19
SHKBP1-222ENST00000600320 SPECC1Q5M775 1068 aa22.49■■□□□ 1.19
SHKBP1-222ENST00000600320 BANK1Q8NDB2 785 aa22.49■■□□□ 1.19
SHKBP1-222ENST00000600320 KCNG4Q8TDN1 519 aa22.49■■□□□ 1.19
SHKBP1-222ENST00000600320 PPP1R13LQ8WUF5 828 aa22.49■■□□□ 1.19
SHKBP1-222ENST00000600320 MTG1Q9BT17 334 aaPredicted RBP22.49■■□□□ 1.19
SHKBP1-222ENST00000600320 ZNF302Q9NR11 478 aa22.49■■□□□ 1.19
SHKBP1-222ENST00000600320 WRAP73Q9P2S5 460 aaPredicted RBP22.49■■□□□ 1.19
SHKBP1-222ENST00000600320 LRWD1Q9UFC0 647 aa22.49■■□□□ 1.19
SHKBP1-222ENST00000600320 PCDHA7Q9UN72 937 aa22.49■■□□□ 1.19
SHKBP1-222ENST00000600320 IGSF9BQ9UPX0 1349 aa22.49■■□□□ 1.19
SHKBP1-222ENST00000600320 WDR81Q562E7 1941 aa22.49■■□□□ 1.19
SHKBP1-222ENST00000600320 CENPFP49454 3210 aa22.48■■□□□ 1.19
SHKBP1-222ENST00000600320 MOXD2PA6NHM9 499 aa22.48■■□□□ 1.19
SHKBP1-222ENST00000600320 ZNF862O60290 1169 aa22.48■■□□□ 1.19
SHKBP1-222ENST00000600320 MED24O75448 989 aa22.48■■□□□ 1.19
SHKBP1-222ENST00000600320 ATP4AP20648 1035 aa22.48■■□□□ 1.19
SHKBP1-222ENST00000600320 STAT5BP51692 787 aa22.48■■□□□ 1.19
SHKBP1-222ENST00000600320 PSMC6P62333 389 aa22.48■■□□□ 1.19
SHKBP1-222ENST00000600320 CYP4A11Q02928 519 aa22.48■■□□□ 1.19
SHKBP1-222ENST00000600320 CTTNQ14247 550 aaKnown RBP22.48■■□□□ 1.19
SHKBP1-222ENST00000600320 AXDND1Q5T1B0 1012 aaPredicted RBP22.48■■□□□ 1.19
SHKBP1-222ENST00000600320 USP49Q70CQ1 688 aa22.48■■□□□ 1.19
SHKBP1-222ENST00000600320 AFAP1L1Q8TED9 768 aa22.48■■□□□ 1.19
SHKBP1-222ENST00000600320 HSD17B14Q9BPX1 270 aa22.48■■□□□ 1.19
SHKBP1-222ENST00000600320 MMTAG2Q9BU76 263 aaKnown RBP22.48■■□□□ 1.19
SHKBP1-222ENST00000600320 RAB34Q9BZG1 259 aa22.48■■□□□ 1.19
SHKBP1-222ENST00000600320 MAFBQ9Y5Q3 323 aaPredicted RBP22.48■■□□□ 1.19
SHKBP1-222ENST00000600320 HAS3O00219 553 aa22.47■■□□□ 1.19
SHKBP1-222ENST00000600320 SLITRK3O94933 977 aa22.47■■□□□ 1.19
SHKBP1-222ENST00000600320 SPATA31C1P0DKV0 1188 aa22.47■■□□□ 1.19
SHKBP1-222ENST00000600320 MARK3P27448 753 aa22.47■■□□□ 1.19
SHKBP1-222ENST00000600320 LONP1P36776 959 aaKnown RBP22.47■■□□□ 1.19
SHKBP1-222ENST00000600320 PSEN2P49810 448 aa22.47■■□□□ 1.19
SHKBP1-222ENST00000600320 SOX10P56693 466 aa22.47■■□□□ 1.19
SHKBP1-222ENST00000600320 FAM160B1Q5W0V3 765 aa22.47■■□□□ 1.19
SHKBP1-222ENST00000600320 PDXDC2PQ6P474 469 aa22.47■■□□□ 1.19
SHKBP1-222ENST00000600320 ANKLE1Q8NAG6 615 aa22.47■■□□□ 1.19
SHKBP1-222ENST00000600320 GLG1Q92896 1179 aa22.47■■□□□ 1.19
SHKBP1-222ENST00000600320 SCAND2PQ9GZW5 306 aaPredicted RBP22.47■■□□□ 1.19
SHKBP1-222ENST00000600320 SMARCAD1Q9H4L7 1026 aa22.47■■□□□ 1.19
SHKBP1-222ENST00000600320 AZI2Q9H6S1 392 aa22.47■■□□□ 1.19
SHKBP1-222ENST00000600320 A0A1W2PQ45 241 aaPredicted RBP22.46■■□□□ 1.19
SHKBP1-222ENST00000600320 A0A1W2PQY0 241 aa22.46■■□□□ 1.19
SHKBP1-222ENST00000600320 H3BRB1 525 aa22.46■■□□□ 1.19
SHKBP1-222ENST00000600320 CUTAO60888 179 aa22.46■■□□□ 1.19
SHKBP1-222ENST00000600320 STBD1O95210 358 aa22.46■■□□□ 1.19
SHKBP1-222ENST00000600320 P4HBP07237 508 aaKnown RBP22.46■■□□□ 1.19
SHKBP1-222ENST00000600320 ME1P48163 572 aa22.46■■□□□ 1.19
SHKBP1-222ENST00000600320 MFSD10Q14728 455 aa22.46■■□□□ 1.19
SHKBP1-222ENST00000600320 ECM1Q16610 540 aa22.46■■□□□ 1.19
SHKBP1-222ENST00000600320 PLPPR4Q7Z2D5 763 aa22.46■■□□□ 1.19
SHKBP1-222ENST00000600320 SNX29Q8TEQ0 813 aa22.46■■□□□ 1.19
SHKBP1-222ENST00000600320 RNPEPQ9H4A4 650 aa22.46■■□□□ 1.19
SHKBP1-222ENST00000600320 TUT1Q9H6E5 874 aaKnown RBP22.46■■□□□ 1.19
SHKBP1-222ENST00000600320 SCN10AQ9Y5Y9 1956 aa22.46■■□□□ 1.19
SHKBP1-222ENST00000600320 GRIN2DO15399 1336 aa22.46■■□□□ 1.19
SHKBP1-222ENST00000600320 COL6A1P12109 1028 aa22.45■■□□□ 1.18
SHKBP1-222ENST00000600320 QARSP47897 775 aaKnown RBP22.45■■□□□ 1.18
SHKBP1-222ENST00000600320 CHMP4BP1P59074 171 aa22.45■■□□□ 1.18
SHKBP1-222ENST00000600320 PSMC5P62195 406 aa22.45■■□□□ 1.18
SHKBP1-222ENST00000600320 PLCB4Q15147 1175 aa22.45■■□□□ 1.18
SHKBP1-222ENST00000600320 SHC4Q6S5L8 630 aa22.45■■□□□ 1.18
SHKBP1-222ENST00000600320 CATSPER3Q86XQ3 398 aa22.45■■□□□ 1.18
SHKBP1-222ENST00000600320 TPH2Q8IWU9 490 aa22.45■■□□□ 1.18
SHKBP1-222ENST00000600320 ERMNQ8TAM6 284 aa22.45■■□□□ 1.18
SHKBP1-222ENST00000600320 NEK9Q8TD19 979 aa22.45■■□□□ 1.18
SHKBP1-222ENST00000600320 EPSTI1Q96J88 318 aa22.45■■□□□ 1.18
SHKBP1-222ENST00000600320 AK8Q96MA6 479 aa22.45■■□□□ 1.18
SHKBP1-222ENST00000600320 LXNQ9BS40 222 aa22.45■■□□□ 1.18
SHKBP1-222ENST00000600320 POLR3CQ9BUI4 534 aaPredicted RBP22.45■■□□□ 1.18
SHKBP1-222ENST00000600320 ERAP1Q9NZ08 941 aa22.45■■□□□ 1.18
SHKBP1-222ENST00000600320 A0A087WWV3 80 aa22.44■■□□□ 1.18
SHKBP1-222ENST00000600320 POTEB3A0JP26 581 aa22.44■■□□□ 1.18
SHKBP1-222ENST00000600320 CABYRO75952 493 aa22.44■■□□□ 1.18
SHKBP1-222ENST00000600320 CAPN2P17655 700 aa22.44■■□□□ 1.18
SHKBP1-222ENST00000600320 CCT6AP40227 531 aaKnown RBP22.44■■□□□ 1.18
SHKBP1-222ENST00000600320 RGS19P49795 217 aa22.44■■□□□ 1.18
SHKBP1-222ENST00000600320 PRKCEQ02156 737 aa22.44■■□□□ 1.18
SHKBP1-222ENST00000600320 KIAA0753Q2KHM9 967 aa22.44■■□□□ 1.18
SHKBP1-222ENST00000600320 POTEBQ6S5H4 581 aa22.44■■□□□ 1.18
SHKBP1-222ENST00000600320 TRMT1LQ7Z2T5 733 aaKnown RBP22.44■■□□□ 1.18
SHKBP1-222ENST00000600320 ZNF579Q8NAF0 562 aaKnown RBP22.44■■□□□ 1.18
SHKBP1-222ENST00000600320 SYMPKQ92797 1274 aaKnown RBP22.44■■□□□ 1.18
SHKBP1-222ENST00000600320 ATP6V0A1Q93050 837 aa22.44■■□□□ 1.18
SHKBP1-222ENST00000600320 PAWRQ96IZ0 340 aaKnown RBP22.44■■□□□ 1.18
SHKBP1-222ENST00000600320 GLT1D1Q96MS3 346 aa22.44■■□□□ 1.18
SHKBP1-222ENST00000600320 PNMA5Q96PV4 448 aa22.44■■□□□ 1.18
SHKBP1-222ENST00000600320 TUFT1Q9NNX1 390 aa22.44■■□□□ 1.18
SHKBP1-222ENST00000600320 STARD7Q9NQZ5 370 aa22.44■■□□□ 1.18
SHKBP1-222ENST00000600320 ZNF215Q9UL58 517 aaPredicted RBP22.44■■□□□ 1.18
SHKBP1-222ENST00000600320 TMEM150BA6NC51 233 aa22.43■■□□□ 1.18
SHKBP1-222ENST00000600320 RPA1P27694 616 aa22.43■■□□□ 1.18
SHKBP1-222ENST00000600320 NBPF20Q3BBV1 942 aa22.43■■□□□ 1.18
SHKBP1-222ENST00000600320 KRT79Q5XKE5 535 aa22.43■■□□□ 1.18
SHKBP1-222ENST00000600320 HAUS3Q68CZ6 603 aa22.43■■□□□ 1.18
SHKBP1-222ENST00000600320 UBE2Q1Q7Z7E8 422 aa22.43■■□□□ 1.18
SHKBP1-222ENST00000600320 CABP7Q86V35 215 aa22.43■■□□□ 1.18
SHKBP1-222ENST00000600320 KATNAL1Q9BW62 490 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms