RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 SYCP3Q8IZU3 236 aa6.22□□□□□ -1.41
LINC01538-201ENST00000588074 STK11IPQ8N1F8 1099 aa6.22□□□□□ -1.41
LINC01538-201ENST00000588074 TEKT4Q8WW24 435 aa6.22□□□□□ -1.41
LINC01538-201ENST00000588074 ATXN2LQ8WWM7 1075 aaKnown RBP6.22□□□□□ -1.41
LINC01538-201ENST00000588074 SPAG5Q96R06 1193 aa6.22□□□□□ -1.41
LINC01538-201ENST00000588074 IWS1Q96ST2 819 aa6.22□□□□□ -1.41
LINC01538-201ENST00000588074 MUC3BQ9H195 1237 aa6.22□□□□□ -1.41
LINC01538-201ENST00000588074 TMEM39AQ9NV64 488 aa6.22□□□□□ -1.41
LINC01538-201ENST00000588074 CIDEBQ9UHD4 219 aa6.22□□□□□ -1.41
LINC01538-201ENST00000588074 SAP30BPQ9UHR5 308 aaKnown RBP6.22□□□□□ -1.41
LINC01538-201ENST00000588074 DMTF1Q9Y222 760 aa6.22□□□□□ -1.41
LINC01538-201ENST00000588074 ANO9A1A5B4 782 aa6.21□□□□□ -1.41
LINC01538-201ENST00000588074 TARSL2A2RTX5 802 aaKnown RBP6.21□□□□□ -1.41
LINC01538-201ENST00000588074 A6NNZ2 444 aa6.21□□□□□ -1.41
LINC01538-201ENST00000588074 PRRT4C9JH25 899 aa6.21□□□□□ -1.41
LINC01538-201ENST00000588074 ABLIM1O14639 778 aa6.21□□□□□ -1.41
LINC01538-201ENST00000588074 BRINP1O60477 761 aa6.21□□□□□ -1.41
LINC01538-201ENST00000588074 ZBED4O75132 1171 aa6.21□□□□□ -1.41
LINC01538-201ENST00000588074 KIAA0754O94854 1291 aa6.21□□□□□ -1.41
LINC01538-201ENST00000588074 HTR3BO95264 441 aa6.21□□□□□ -1.41
LINC01538-201ENST00000588074 GNAT1P11488 350 aa6.21□□□□□ -1.41
LINC01538-201ENST00000588074 CDC25BP30305 580 aa6.21□□□□□ -1.41
LINC01538-201ENST00000588074 POLR2BP30876 1174 aaKnown RBP6.21□□□□□ -1.41
LINC01538-201ENST00000588074 NUCB1Q02818 461 aa6.21□□□□□ -1.41
LINC01538-201ENST00000588074 RPL6Q02878 288 aaKnown RBP6.21□□□□□ -1.41
LINC01538-201ENST00000588074 DRP2Q13474 957 aa6.21□□□□□ -1.41
LINC01538-201ENST00000588074 ARSJQ5FYB0 599 aaPredicted RBP6.21□□□□□ -1.41
LINC01538-201ENST00000588074 GNASQ5JWF2 1037 aa6.21□□□□□ -1.41
LINC01538-201ENST00000588074 SLC27A3Q5K4L6 730 aa6.21□□□□□ -1.41
LINC01538-201ENST00000588074 SPDYCQ5MJ68 293 aa6.21□□□□□ -1.41
LINC01538-201ENST00000588074 CREB3L3Q68CJ9 461 aa6.21□□□□□ -1.41
LINC01538-201ENST00000588074 B4GALNT4Q76KP1 1039 aa6.21□□□□□ -1.41
LINC01538-201ENST00000588074 SLC7A5P1Q8MH63 180 aa6.21□□□□□ -1.41
LINC01538-201ENST00000588074 CNNM3Q8NE01 707 aa6.21□□□□□ -1.41
LINC01538-201ENST00000588074 GCC1Q96CN9 775 aa6.21□□□□□ -1.41
LINC01538-201ENST00000588074 GSDMAQ96QA5 445 aa6.21□□□□□ -1.41
LINC01538-201ENST00000588074 CENPOQ9BU64 300 aa6.21□□□□□ -1.41
LINC01538-201ENST00000588074 NAA15Q9BXJ9 866 aaKnown RBP6.21□□□□□ -1.41
LINC01538-201ENST00000588074 TAOK3Q9H2K8 898 aa6.21□□□□□ -1.41
LINC01538-201ENST00000588074 MRPL46Q9H2W6 279 aaKnown RBP6.21□□□□□ -1.41
LINC01538-201ENST00000588074 ATXN10Q9UBB4 475 aa6.21□□□□□ -1.41
LINC01538-201ENST00000588074 SPATA31E1Q6ZUB1 1445 aa6.21□□□□□ -1.41
LINC01538-201ENST00000588074 ZNF644Q9H582 1327 aaPredicted RBP6.21□□□□□ -1.41
LINC01538-201ENST00000588074 PIK3R4Q99570 1358 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 TRAV20A0A0B4J274 112 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 BLACEA4D250 179 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 CCDC151A5D8V7 595 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 IQCA1LA6NCM1 817 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 PABPN1LA6NDY0 278 aaKnown RBP6.21□□□□□ -1.42
LINC01538-201ENST00000588074 ZNF891A8MT65 544 aaPredicted RBP6.21□□□□□ -1.42
LINC01538-201ENST00000588074 FAM25EA8MYX2 175 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 P4HA2O15460 535 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 TTI1O43156 1089 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 ZSCAN12O43309 604 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 SHOX2O60902 331 aaPredicted RBP6.21□□□□□ -1.42
LINC01538-201ENST00000588074 TMCC1O94876 653 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 MAP3K6O95382 1288 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 CCDC166P0CW27 439 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 BPIP17213 487 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 SYT1P21579 422 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 LPOP22079 712 aaPredicted RBP6.21□□□□□ -1.42
LINC01538-201ENST00000588074 MATR3P43243 847 aaKnown RBP eCLIP6.21□□□□□ -1.42
LINC01538-201ENST00000588074 CLCN2P51788 898 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 TMEM62Q0P6H9 643 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 INAQ16352 499 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 IQCEQ6IPM2 695 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 NCCRP1Q6ZVX7 275 aaPredicted RBP6.21□□□□□ -1.42
LINC01538-201ENST00000588074 BZW1Q7L1Q6 419 aaKnown RBP6.21□□□□□ -1.42
LINC01538-201ENST00000588074 NANOGNBQ7Z5D8 188 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 CEP57Q86XR8 500 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 IFNL2Q8IZJ0 200 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 ATG4CQ96DT6 458 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 ACSBG1Q96GR2 724 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 FUBP3Q96I24 572 aaKnown RBP eCLIP6.21□□□□□ -1.42
LINC01538-201ENST00000588074 ZMAT2Q96NC0 199 aaKnown RBP6.21□□□□□ -1.42
LINC01538-201ENST00000588074 GPR101Q96P66 508 aaPredicted RBP6.21□□□□□ -1.42
LINC01538-201ENST00000588074 EIF2AK1Q9BQI3 630 aaKnown RBP6.21□□□□□ -1.42
LINC01538-201ENST00000588074 HERPUD2Q9BSE4 406 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 LRRC27Q9C0I9 530 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 YIPF3Q9GZM5 350 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 DHX36Q9H2U1 1008 aaKnown RBP6.21□□□□□ -1.42
LINC01538-201ENST00000588074 SYNCQ9H7C4 482 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 ZFAND3Q9H8U3 227 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 SCUBE2Q9NQ36 999 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 HELLSQ9NRZ9 838 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 DKK3Q9UBP4 350 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 ZNF69Q9UC07 566 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 BZW2Q9Y6E2 419 aaKnown RBP6.21□□□□□ -1.42
LINC01538-201ENST00000588074 PLB1Q6P1J6 1458 aa6.21□□□□□ -1.42
LINC01538-201ENST00000588074 PRDM15P57071 1507 aaPredicted RBP6.21□□□□□ -1.42
LINC01538-201ENST00000588074 SNPHO15079 494 aa6.2□□□□□ -1.42
LINC01538-201ENST00000588074 SART1O43290 800 aaKnown RBP6.2□□□□□ -1.42
LINC01538-201ENST00000588074 TBCAO75347 108 aaKnown RBP6.2□□□□□ -1.42
LINC01538-201ENST00000588074 TADA3O75528 432 aa6.2□□□□□ -1.42
LINC01538-201ENST00000588074 STAM2O75886 525 aa6.2□□□□□ -1.42
LINC01538-201ENST00000588074 RHOBTB3O94955 611 aa6.2□□□□□ -1.42
LINC01538-201ENST00000588074 SEC31AO94979 1220 aaKnown RBP6.2□□□□□ -1.42
LINC01538-201ENST00000588074 LUC7L3O95232 432 aaKnown RBP6.2□□□□□ -1.42
LINC01538-201ENST00000588074 TATP17735 454 aaPredicted RBP6.2□□□□□ -1.42
LINC01538-201ENST00000588074 IL4RP24394 825 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms