RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 USP26Q9BXU7 913 aa11.81□□□□□ -0.52
GGA3-219ENST00000584550 MAF1Q9H063 256 aa11.81□□□□□ -0.52
GGA3-219ENST00000584550 IL25Q9H293 177 aa11.81□□□□□ -0.52
GGA3-219ENST00000584550 KAT14Q9H8E8 782 aa11.81□□□□□ -0.52
GGA3-219ENST00000584550 EHMT1Q9H9B1 1298 aa11.81□□□□□ -0.52
GGA3-219ENST00000584550 TGFB3P10600 412 aa11.8□□□□□ -0.52
GGA3-219ENST00000584550 CCND2P30279 289 aa11.8□□□□□ -0.52
GGA3-219ENST00000584550 GATMP50440 423 aa11.8□□□□□ -0.52
GGA3-219ENST00000584550 ERICH6BQ5W0A0 696 aa11.8□□□□□ -0.52
GGA3-219ENST00000584550 STOX1Q6ZVD7 989 aa11.8□□□□□ -0.52
GGA3-219ENST00000584550 ERMP1Q7Z2K6 904 aa11.8□□□□□ -0.52
GGA3-219ENST00000584550 FRMD5Q7Z6J6 570 aa11.8□□□□□ -0.52
GGA3-219ENST00000584550 TMEM105Q8N8V8 129 aa11.8□□□□□ -0.52
GGA3-219ENST00000584550 GPR20Q99678 358 aa11.8□□□□□ -0.52
GGA3-219ENST00000584550 AMNQ9BXJ7 453 aa11.8□□□□□ -0.52
GGA3-219ENST00000584550 TSHZ2Q9NRE2 1034 aa11.8□□□□□ -0.52
GGA3-219ENST00000584550 RTEL1Q9NZ71 1219 aa11.8□□□□□ -0.52
GGA3-219ENST00000584550 CACNA1HO95180 2353 aa11.8□□□□□ -0.52
GGA3-219ENST00000584550 NEDD4P46934 1319 aa11.8□□□□□ -0.52
GGA3-219ENST00000584550 TTC3P53804 2025 aa11.79□□□□□ -0.52
GGA3-219ENST00000584550 KAT6AQ92794 2004 aa11.79□□□□□ -0.52
GGA3-219ENST00000584550 PPP1R11O60927 126 aaPredicted RBP11.79□□□□□ -0.52
GGA3-219ENST00000584550 PARP1P09874 1014 aaKnown RBP11.79□□□□□ -0.52
GGA3-219ENST00000584550 CD52P31358 61 aa11.79□□□□□ -0.52
GGA3-219ENST00000584550 ADAM17P78536 824 aa11.79□□□□□ -0.52
GGA3-219ENST00000584550 MGAT3Q09327 533 aa11.79□□□□□ -0.52
GGA3-219ENST00000584550 ASPRV1Q53RT3 343 aa11.79□□□□□ -0.52
GGA3-219ENST00000584550 NAALADL2Q58DX5 795 aa11.79□□□□□ -0.52
GGA3-219ENST00000584550 RTN4RL1Q86UN2 441 aaPredicted RBP11.79□□□□□ -0.52
GGA3-219ENST00000584550 DGKHQ86XP1 1220 aa11.79□□□□□ -0.52
GGA3-219ENST00000584550 CMTR2Q8IYT2 770 aaKnown RBP11.79□□□□□ -0.52
GGA3-219ENST00000584550 ADSSL1Q8N142 457 aa11.79□□□□□ -0.52
GGA3-219ENST00000584550 KREMEN2Q8NCW0 462 aa11.79□□□□□ -0.52
GGA3-219ENST00000584550 DNAJB3Q8WWF6 145 aa11.79□□□□□ -0.52
GGA3-219ENST00000584550 LINC01599Q8WXQ3 324 aa11.79□□□□□ -0.52
GGA3-219ENST00000584550 SUSD6Q92537 303 aa11.79□□□□□ -0.52
GGA3-219ENST00000584550 ESR2Q92731 530 aa11.79□□□□□ -0.52
GGA3-219ENST00000584550 ZBTB10Q96DT7 871 aa11.79□□□□□ -0.52
GGA3-219ENST00000584550 SMOC2Q9H3U7 446 aa11.79□□□□□ -0.52
GGA3-219ENST00000584550 AGO3Q9H9G7 860 aaKnown RBP11.79□□□□□ -0.52
GGA3-219ENST00000584550 PCDHA1Q9Y5I3 950 aa11.79□□□□□ -0.52
GGA3-219ENST00000584550 DNAH14Q0VDD8 3507 aa11.78□□□□□ -0.52
GGA3-219ENST00000584550 ZNF213O14771 459 aa11.78□□□□□ -0.52
GGA3-219ENST00000584550 ATF7P17544 494 aaPredicted RBP11.78□□□□□ -0.52
GGA3-219ENST00000584550 NBL1P41271 181 aa11.78□□□□□ -0.52
GGA3-219ENST00000584550 FBXO47Q5MNV8 452 aa11.78□□□□□ -0.52
GGA3-219ENST00000584550 SPOUT1Q5T280 376 aaKnown RBP11.78□□□□□ -0.52
GGA3-219ENST00000584550 LLGL2Q6P1M3 1020 aa11.78□□□□□ -0.52
GGA3-219ENST00000584550 STAG2Q8N3U4 1231 aa11.78□□□□□ -0.52
GGA3-219ENST00000584550 NKD2Q969F2 451 aaPredicted RBP11.78□□□□□ -0.52
GGA3-219ENST00000584550 NEK1Q96PY6 1258 aa11.78□□□□□ -0.52
GGA3-219ENST00000584550 CDH22Q9UJ99 828 aa11.78□□□□□ -0.52
GGA3-219ENST00000584550 ZNF215Q9UL58 517 aaPredicted RBP11.78□□□□□ -0.52
GGA3-219ENST00000584550 CDY2AQ9Y6F7 541 aa11.78□□□□□ -0.52
GGA3-219ENST00000584550 RIF1Q5UIP0 2472 aaKnown RBP11.77□□□□□ -0.53
GGA3-219ENST00000584550 BRD1O95696 1058 aa11.77□□□□□ -0.53
GGA3-219ENST00000584550 MARK3P27448 753 aa11.77□□□□□ -0.53
GGA3-219ENST00000584550 TECP42680 631 aa11.77□□□□□ -0.53
GGA3-219ENST00000584550 ERVFC1P60507 584 aa11.77□□□□□ -0.53
GGA3-219ENST00000584550 IGBP1P78318 339 aa11.77□□□□□ -0.53
GGA3-219ENST00000584550 MRPS9P82933 396 aaKnown RBP11.77□□□□□ -0.53
GGA3-219ENST00000584550 PTH1RQ03431 593 aa11.77□□□□□ -0.53
GGA3-219ENST00000584550 TMEM62Q0P6H9 643 aa11.77□□□□□ -0.53
GGA3-219ENST00000584550 SEMA3FQ13275 785 aa11.77□□□□□ -0.53
GGA3-219ENST00000584550 NEDD9Q14511 834 aa11.77□□□□□ -0.53
GGA3-219ENST00000584550 BMP2KLQ5H9B9 411 aa11.77□□□□□ -0.53
GGA3-219ENST00000584550 METTL7BQ6UX53 244 aa11.77□□□□□ -0.53
GGA3-219ENST00000584550 TSHZ1Q6ZSZ6 1077 aa11.77□□□□□ -0.53
GGA3-219ENST00000584550 RSPH3Q86UC2 560 aa11.77□□□□□ -0.53
GGA3-219ENST00000584550 IQCA1Q86XH1 822 aa11.77□□□□□ -0.53
GGA3-219ENST00000584550 HOMER1Q86YM7 354 aa11.77□□□□□ -0.53
GGA3-219ENST00000584550 ATP8B4Q8TF62 1192 aa11.77□□□□□ -0.53
GGA3-219ENST00000584550 DSCC1Q9BVC3 393 aa11.77□□□□□ -0.53
GGA3-219ENST00000584550 FAM49AQ9H0Q0 323 aaPredicted RBP11.77□□□□□ -0.53
GGA3-219ENST00000584550 S1PR5Q9H228 398 aa11.77□□□□□ -0.53
GGA3-219ENST00000584550 NRCAMQ92823 1304 aa11.77□□□□□ -0.53
GGA3-219ENST00000584550 MYO10Q9HD67 2058 aa11.76□□□□□ -0.53
GGA3-219ENST00000584550 SPATA31C2B4DYI2 1134 aa11.76□□□□□ -0.53
GGA3-219ENST00000584550 B4E1Z4 1266 aa11.76□□□□□ -0.53
GGA3-219ENST00000584550 GCOM1H8Y6P7 765 aaPredicted RBP11.76□□□□□ -0.53
GGA3-219ENST00000584550 SGSM2O43147 1006 aa11.76□□□□□ -0.53
GGA3-219ENST00000584550 POLR2MP0CAP2 368 aa11.76□□□□□ -0.53
GGA3-219ENST00000584550 NUBP1P53384 320 aa11.76□□□□□ -0.53
GGA3-219ENST00000584550 APOBRQ0VD83 1088 aa11.76□□□□□ -0.53
GGA3-219ENST00000584550 PPFIA1Q13136 1202 aa11.76□□□□□ -0.53
GGA3-219ENST00000584550 DUSP6Q16828 381 aa11.76□□□□□ -0.53
GGA3-219ENST00000584550 IMMTQ16891 758 aaKnown RBP11.76□□□□□ -0.53
GGA3-219ENST00000584550 GNPTABQ3T906 1256 aa11.76□□□□□ -0.53
GGA3-219ENST00000584550 TAF2Q6P1X5 1199 aa11.76□□□□□ -0.53
GGA3-219ENST00000584550 NPAS4Q8IUM7 802 aa11.76□□□□□ -0.53
GGA3-219ENST00000584550 CRIPAKQ8N1N5 446 aa11.76□□□□□ -0.53
GGA3-219ENST00000584550 ENAHQ8N8S7 591 aaPredicted RBP11.76□□□□□ -0.53
GGA3-219ENST00000584550 ZSCAN10Q96SZ4 725 aaPredicted RBP11.76□□□□□ -0.53
GGA3-219ENST00000584550 RNF41Q9H4P4 317 aaPredicted RBP11.76□□□□□ -0.53
GGA3-219ENST00000584550 TMEM260Q9NX78 707 aa11.76□□□□□ -0.53
GGA3-219ENST00000584550 MAP3K20Q9NYL2 800 aaKnown RBP11.76□□□□□ -0.53
GGA3-219ENST00000584550 TUBE1Q9UJT0 475 aa11.76□□□□□ -0.53
GGA3-219ENST00000584550 LRFN2Q9ULH4 789 aa11.76□□□□□ -0.53
GGA3-219ENST00000584550 DMXL1Q9Y485 3027 aa11.76□□□□□ -0.53
GGA3-219ENST00000584550 LOXHD1Q8IVV2 1947 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms