RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 CDX2Q99626 313 aaPredicted RBP23.18■■□□□ 1.3
SS18-224ENST00000584083 TBC1D22BQ9NU19 505 aa23.18■■□□□ 1.3
SS18-224ENST00000584083 ORC3Q9UBD5 711 aaPredicted RBP23.18■■□□□ 1.3
SS18-224ENST00000584083 KCNJ14Q9UNX9 436 aa23.18■■□□□ 1.3
SS18-224ENST00000584083 TRPC6Q9Y210 931 aa23.18■■□□□ 1.3
SS18-224ENST00000584083 DHX15O43143 795 aaKnown RBP23.17■■□□□ 1.3
SS18-224ENST00000584083 CAND2O75155 1236 aa23.17■■□□□ 1.3
SS18-224ENST00000584083 ATG7O95352 703 aa23.17■■□□□ 1.3
SS18-224ENST00000584083 KCNJ6P48051 423 aa23.17■■□□□ 1.3
SS18-224ENST00000584083 MBTPS1Q14703 1052 aa23.17■■□□□ 1.3
SS18-224ENST00000584083 ME3Q16798 604 aa23.17■■□□□ 1.3
SS18-224ENST00000584083 PLPPR4Q7Z2D5 763 aa23.17■■□□□ 1.3
SS18-224ENST00000584083 DAGLBQ8NCG7 672 aa23.17■■□□□ 1.3
SS18-224ENST00000584083 TBCKQ8TEA7 893 aa23.17■■□□□ 1.3
SS18-224ENST00000584083 SLC9A7Q96T83 725 aa23.17■■□□□ 1.3
SS18-224ENST00000584083 NKX2-4Q9H2Z4 354 aa23.17■■□□□ 1.3
SS18-224ENST00000584083 TUBE1Q9UJT0 475 aa23.17■■□□□ 1.3
SS18-224ENST00000584083 LARGE1O95461 756 aa23.16■■□□□ 1.3
SS18-224ENST00000584083 CTDNEP1O95476 244 aa23.16■■□□□ 1.3
SS18-224ENST00000584083 INSRRP14616 1297 aa23.16■■□□□ 1.3
SS18-224ENST00000584083 C8orf34Q49A92 452 aa23.16■■□□□ 1.3
SS18-224ENST00000584083 FAM160B1Q5W0V3 765 aa23.16■■□□□ 1.3
SS18-224ENST00000584083 MIS18BP1Q6P0N0 1132 aa23.16■■□□□ 1.3
SS18-224ENST00000584083 ABHD15Q6UXT9 468 aa23.16■■□□□ 1.3
SS18-224ENST00000584083 WASF1Q92558 559 aa23.16■■□□□ 1.3
SS18-224ENST00000584083 YBX2Q9Y2T7 364 aaKnown RBP23.16■■□□□ 1.3
SS18-224ENST00000584083 PCDHA11Q9Y5I1 949 aa23.16■■□□□ 1.3
SS18-224ENST00000584083 RRN3P2A6NIE6 340 aa23.15■■□□□ 1.3
SS18-224ENST00000584083 IKBKEQ14164 716 aa23.15■■□□□ 1.3
SS18-224ENST00000584083 PLCB4Q15147 1175 aa23.15■■□□□ 1.3
SS18-224ENST00000584083 NPY5RQ15761 445 aa23.15■■□□□ 1.3
SS18-224ENST00000584083 TAF2Q6P1X5 1199 aa23.15■■□□□ 1.3
SS18-224ENST00000584083 RUFY4Q6ZNE9 571 aa23.15■■□□□ 1.3
SS18-224ENST00000584083 PHOSPHO2Q8TCD6 241 aa23.15■■□□□ 1.3
SS18-224ENST00000584083 MYLIPQ8WY64 445 aa23.15■■□□□ 1.3
SS18-224ENST00000584083 GTF3C6Q969F1 213 aa23.15■■□□□ 1.3
SS18-224ENST00000584083 PHF20Q9BVI0 1012 aa23.15■■□□□ 1.3
SS18-224ENST00000584083 SLC28A3Q9HAS3 691 aa23.15■■□□□ 1.3
SS18-224ENST00000584083 ABHD14A-ACY1A0A1B0GW23 586 aa23.14■■□□□ 1.29
SS18-224ENST00000584083 POTEB3A0JP26 581 aa23.14■■□□□ 1.29
SS18-224ENST00000584083 M0R2N6 131 aa23.14■■□□□ 1.29
SS18-224ENST00000584083 EDIL3O43854 480 aa23.14■■□□□ 1.29
SS18-224ENST00000584083 MYOGP15173 224 aa23.14■■□□□ 1.29
SS18-224ENST00000584083 SLC26A2P50443 739 aa23.14■■□□□ 1.29
SS18-224ENST00000584083 KRT76Q01546 638 aa23.14■■□□□ 1.29
SS18-224ENST00000584083 GRIN2CQ14957 1233 aa23.14■■□□□ 1.29
SS18-224ENST00000584083 NONOQ15233 471 aaKnown RBP eCLIP23.14■■□□□ 1.29
SS18-224ENST00000584083 ZNF746Q6NUN9 644 aaPredicted RBP23.14■■□□□ 1.29
SS18-224ENST00000584083 SWSAP1Q6NVH7 229 aa23.14■■□□□ 1.29
SS18-224ENST00000584083 PDXDC2PQ6P474 469 aa23.14■■□□□ 1.29
SS18-224ENST00000584083 POTEBQ6S5H4 581 aa23.14■■□□□ 1.29
SS18-224ENST00000584083 KRT25Q7Z3Z0 450 aa23.14■■□□□ 1.29
SS18-224ENST00000584083 RSPH3Q86UC2 560 aa23.14■■□□□ 1.29
SS18-224ENST00000584083 LENG9Q96B70 501 aa23.14■■□□□ 1.29
SS18-224ENST00000584083 ZNF302Q9NR11 478 aa23.14■■□□□ 1.29
SS18-224ENST00000584083 GJB4Q9NTQ9 266 aa23.14■■□□□ 1.29
SS18-224ENST00000584083 WDR81Q562E7 1941 aa23.14■■□□□ 1.29
SS18-224ENST00000584083 IGKV6D-21A0A0A0MT36 114 aa23.13■■□□□ 1.29
SS18-224ENST00000584083 RBAK-RBAKDNI3L0D1 243 aa23.13■■□□□ 1.29
SS18-224ENST00000584083 WDR5P61964 334 aaKnown RBP23.13■■□□□ 1.29
SS18-224ENST00000584083 TCTN1Q2MV58 587 aa23.13■■□□□ 1.29
SS18-224ENST00000584083 MARCH8Q5T0T0 291 aa23.13■■□□□ 1.29
SS18-224ENST00000584083 HERC6Q8IVU3 1022 aa23.13■■□□□ 1.29
SS18-224ENST00000584083 CCDC60Q8IWA6 550 aaPredicted RBP23.13■■□□□ 1.29
SS18-224ENST00000584083 DBF4BQ8NFT6 615 aa23.13■■□□□ 1.29
SS18-224ENST00000584083 SAMM50Q9Y512 469 aa23.13■■□□□ 1.29
SS18-224ENST00000584083 PTPRSQ13332 1948 aa23.13■■□□□ 1.29
SS18-224ENST00000584083 CCDC194A0A1B0GVG4 234 aa23.12■■□□□ 1.29
SS18-224ENST00000584083 MBLAC1A4D2B0 266 aaPredicted RBP23.12■■□□□ 1.29
SS18-224ENST00000584083 KIF28PB7ZC32 967 aa23.12■■□□□ 1.29
SS18-224ENST00000584083 MSH4O15457 936 aa23.12■■□□□ 1.29
SS18-224ENST00000584083 EFCAB14O75071 495 aa23.12■■□□□ 1.29
SS18-224ENST00000584083 PSAPP07602 524 aa23.12■■□□□ 1.29
SS18-224ENST00000584083 FAM26DQ5JW98 314 aa23.12■■□□□ 1.29
SS18-224ENST00000584083 CKAP2LQ8IYA6 745 aa23.12■■□□□ 1.29
SS18-224ENST00000584083 SMAP1Q8IYB5 467 aaPredicted RBP23.12■■□□□ 1.29
SS18-224ENST00000584083 TRAPPC12Q8WVT3 735 aa23.12■■□□□ 1.29
SS18-224ENST00000584083 DNAJB3Q8WWF6 145 aa23.12■■□□□ 1.29
SS18-224ENST00000584083 SEPT8Q92599 483 aa23.12■■□□□ 1.29
SS18-224ENST00000584083 ZBTB10Q96DT7 871 aa23.12■■□□□ 1.29
SS18-224ENST00000584083 MICAL3Q7RTP6 2002 aa23.11■■□□□ 1.29
SS18-224ENST00000584083 GAS7O60861 476 aa23.11■■□□□ 1.29
SS18-224ENST00000584083 TDP2O95551 362 aa23.11■■□□□ 1.29
SS18-224ENST00000584083 FOSL2P15408 326 aa23.11■■□□□ 1.29
SS18-224ENST00000584083 INF2Q27J81 1249 aa23.11■■□□□ 1.29
SS18-224ENST00000584083 PLEKHG4Q58EX7 1191 aa23.11■■□□□ 1.29
SS18-224ENST00000584083 PPP2R2DQ66LE6 453 aa23.11■■□□□ 1.29
SS18-224ENST00000584083 RPAINQ86UA6 219 aa23.11■■□□□ 1.29
SS18-224ENST00000584083 ZBED2Q9BTP6 218 aa23.11■■□□□ 1.29
SS18-224ENST00000584083 FAM49AQ9H0Q0 323 aaPredicted RBP23.11■■□□□ 1.29
SS18-224ENST00000584083 LIMCH1Q9UPQ0 1083 aa23.11■■□□□ 1.29
SS18-224ENST00000584083 PCDHA10Q9Y5I2 948 aa23.11■■□□□ 1.29
SS18-224ENST00000584083 CYP3A7-CYP3A51PA0A087WV96 503 aa23.1■■□□□ 1.29
SS18-224ENST00000584083 HBP1O60381 514 aa23.1■■□□□ 1.29
SS18-224ENST00000584083 CHRNA1P02708 482 aa23.1■■□□□ 1.29
SS18-224ENST00000584083 FDPSP14324 419 aaKnown RBP23.1■■□□□ 1.29
SS18-224ENST00000584083 CYP3A7P24462 503 aa23.1■■□□□ 1.29
SS18-224ENST00000584083 DEFB103AP81534 67 aa23.1■■□□□ 1.29
SS18-224ENST00000584083 Q4G0T1 1027 aa23.1■■□□□ 1.29
SS18-224ENST00000584083 LRCH2Q5VUJ6 765 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms