RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 MEI1Q5TIA1 1274 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 RINT1Q6NUQ1 792 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 LEKR1Q6ZMV7 388 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 SPATA2LQ8IUW3 424 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 APPL2Q8NEU8 664 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 NEK9Q8TD19 979 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 PPP4R1Q8TF05 950 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 TMX3Q96JJ7 454 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 FAM227BQ96M60 508 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 ZNF512Q96ME7 567 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 HEXIM2Q96MH2 286 aaKnown RBP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 USP26Q9BXU7 913 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 EDEM3Q9BZQ6 932 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 USP44Q9H0E7 712 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 SEPT10Q9P0V9 454 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 ANAPC4Q9UJX5 808 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 GDAQ9Y2T3 454 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 TMEM131LA2VDJ0 1609 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 CPSF1Q10570 1443 aaKnown RBP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 SAMD9LQ8IVG5 1584 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 NPC1L1Q9UHC9 1359 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 MED23Q9ULK4 1368 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 MROH7Q68CQ1 1323 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 ZC3H4Q9UPT8 1303 aaKnown RBP3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 LAD1O00515 517 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 ZBTB5O15062 677 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 NKRFO15226 690 aaKnown RBP eCLIP3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 ASAP2O43150 1006 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 FGAP02671 866 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 ACADMP11310 421 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 PDIA3P30101 505 aaKnown RBP3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 NSFP46459 744 aaKnown RBP3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 NDUFV1P49821 464 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 MFAP3P55082 362 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 ADCY1Q08828 1119 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 GSE1Q14687 1217 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 KCNB1Q14721 858 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 ANO6Q4KMQ2 910 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 OR6B2Q6IFH4 312 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 SWSAP1Q6NVH7 229 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 MAATS1Q7Z4T9 603 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 GLYCTKQ8IVS8 523 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 CEP112Q8N8E3 955 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 RABGGTAQ92696 567 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 EAF2Q96CJ1 260 aaPredicted RBP3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 KIAA1586Q9HCI6 787 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 RAB20Q9NX57 234 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 CWC15Q9P013 229 aaKnown RBP3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 SLC9A2Q9UBY0 812 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 FEZ2Q9UHY8 353 aaPredicted RBP3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 KCNH3Q9ULD8 1083 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 PCDHB9Q9Y5E1 797 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 KDM6AO15550 1401 aaPredicted RBP3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 KDM1AO60341 852 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 ASMTLO95671 621 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 SLC4A1P02730 911 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 ADD2P35612 726 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 IFNAR2P48551 515 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 MXRA7P84157 204 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 WASHC5Q12768 1159 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 BAATQ14032 418 aaPredicted RBP3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 PTPN14Q15678 1187 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 UAP1Q16222 522 aaPredicted RBP3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 HSP90AA4PQ58FG1 418 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 GBP6Q6ZN66 633 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 SSH3Q8TE77 659 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 RSAD2Q8WXG1 361 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 SPON2Q9BUD6 331 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 TRIM7Q9C029 511 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 TMEM39BQ9GZU3 492 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 ERAP1Q9NZ08 941 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 SAMD15Q9P1V8 674 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 GABBR1Q9UBS5 961 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 MYOM2P54296 1465 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 PNMA6EA0A0J9YXQ4 647 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 A0A1B0GVL5 298 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 SART1O43290 800 aaKnown RBP3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 SYNCRIPO60506 623 aaKnown RBP3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 CAND2O75155 1236 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 KLRC2P26717 231 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 GRK4P32298 578 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 MAN1A1P33908 653 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 EFNA5P52803 228 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 GTF2H3Q13889 308 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 IQCB1Q15051 598 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 PAN2Q504Q3 1202 aaKnown RBP3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 SLC45A4Q5BKX6 768 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 KIAA1755Q5JYT7 1200 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 SPECC1LQ69YQ0 1117 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 SMIM5Q71RC9 77 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 RGL4Q8IZJ4 473 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 LCORLQ8N3X6 602 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 TBC1D19Q8N5T2 526 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 SNX19Q92543 992 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 SYMPKQ92797 1274 aaKnown RBP3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 GJA10Q969M2 543 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 SH3KBP1Q96B97 665 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 DEFB118Q96PH6 123 aa3.18□□□□□ -1.9
SMCHD1-203ENST00000577880 SLITRK1Q96PX8 696 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms