RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 BHMT2Q9H2M3 363 aa31.58■■■□□ 2.65
CTDNEP1-210ENST00000574322 N4BP3O15049 544 aa31.58■■■□□ 2.65
CTDNEP1-210ENST00000574322 MAFGO15525 162 aa31.58■■■□□ 2.65
CTDNEP1-210ENST00000574322 CCND2P30279 289 aa31.58■■■□□ 2.65
CTDNEP1-210ENST00000574322 TPH2Q8IWU9 490 aa31.58■■■□□ 2.65
CTDNEP1-210ENST00000574322 C17orf53Q8N3J3 647 aaPredicted RBP31.58■■■□□ 2.65
CTDNEP1-210ENST00000574322 A1CFQ9NQ94 594 aaKnown RBP31.58■■■□□ 2.65
CTDNEP1-210ENST00000574322 NPHP3-ACAD11A0A0J9YXS1 232 aa31.57■■■□□ 2.64
CTDNEP1-210ENST00000574322 NRDCO43847 1150 aa31.57■■■□□ 2.64
CTDNEP1-210ENST00000574322 KRT18P05783 430 aaKnown RBP31.57■■■□□ 2.64
CTDNEP1-210ENST00000574322 NR3C2P08235 984 aa31.57■■■□□ 2.64
CTDNEP1-210ENST00000574322 GPRASP2Q96D09 838 aa31.57■■■□□ 2.64
CTDNEP1-210ENST00000574322 MAGEC2Q9UBF1 373 aaPredicted RBP31.57■■■□□ 2.64
CTDNEP1-210ENST00000574322 KIF20AO95235 890 aa31.56■■■□□ 2.64
CTDNEP1-210ENST00000574322 HERC4Q5GLZ8 1057 aaPredicted RBP31.56■■■□□ 2.64
CTDNEP1-210ENST00000574322 PDZRN4Q6ZMN7 1036 aaPredicted RBP31.56■■■□□ 2.64
CTDNEP1-210ENST00000574322 REEP2Q9BRK0 252 aa31.56■■■□□ 2.64
CTDNEP1-210ENST00000574322 KCND2Q9NZV8 630 aa31.56■■■□□ 2.64
CTDNEP1-210ENST00000574322 FAM155AB1AL88 458 aaPredicted RBP31.55■■■□□ 2.64
CTDNEP1-210ENST00000574322 STAM2O75886 525 aa31.55■■■□□ 2.64
CTDNEP1-210ENST00000574322 FGFR1OPO95684 399 aaKnown RBP31.55■■■□□ 2.64
CTDNEP1-210ENST00000574322 ZCWPW2Q504Y3 356 aa31.55■■■□□ 2.64
CTDNEP1-210ENST00000574322 RIOX2Q8IUF8 465 aa31.55■■■□□ 2.64
CTDNEP1-210ENST00000574322 CAPNS2Q96L46 248 aa31.55■■■□□ 2.64
CTDNEP1-210ENST00000574322 INPP4AQ96PE3 977 aaPredicted RBP31.55■■■□□ 2.64
CTDNEP1-210ENST00000574322 TAB2Q9NYJ8 693 aa31.55■■■□□ 2.64
CTDNEP1-210ENST00000574322 MYCLP12524 364 aaPredicted RBP31.55■■■□□ 2.64
CTDNEP1-210ENST00000574322 SNAPC2Q13487 334 aa31.55■■■□□ 2.64
CTDNEP1-210ENST00000574322 RINT1Q6NUQ1 792 aa31.55■■■□□ 2.64
CTDNEP1-210ENST00000574322 MIER3Q7Z3K6 550 aa31.55■■■□□ 2.64
CTDNEP1-210ENST00000574322 PURBQ96QR8 312 aaKnown RBP31.55■■■□□ 2.64
CTDNEP1-210ENST00000574322 FBXO40Q9UH90 709 aa31.55■■■□□ 2.64
CTDNEP1-210ENST00000574322 LGALS16A8MUM7 142 aa31.54■■■□□ 2.64
CTDNEP1-210ENST00000574322 P4HBP07237 508 aaKnown RBP31.54■■■□□ 2.64
CTDNEP1-210ENST00000574322 PTPN21Q16825 1174 aa31.54■■■□□ 2.64
CTDNEP1-210ENST00000574322 C1orf186Q6ZWK4 172 aa31.54■■■□□ 2.64
CTDNEP1-210ENST00000574322 GLIS3Q8NEA6 775 aa31.54■■■□□ 2.64
CTDNEP1-210ENST00000574322 RUSC1Q9BVN2 902 aa31.54■■■□□ 2.64
CTDNEP1-210ENST00000574322 VPS16Q9H269 839 aa31.54■■■□□ 2.64
CTDNEP1-210ENST00000574322 LYPLA2O95372 231 aa31.53■■■□□ 2.64
CTDNEP1-210ENST00000574322 GTF2A2P52657 109 aa31.53■■■□□ 2.64
CTDNEP1-210ENST00000574322 PLS1Q14651 629 aa31.53■■■□□ 2.64
CTDNEP1-210ENST00000574322 GADL1Q6ZQY3 521 aa31.53■■■□□ 2.64
CTDNEP1-210ENST00000574322 TC2NQ8N9U0 490 aa31.53■■■□□ 2.64
CTDNEP1-210ENST00000574322 TSG101Q99816 390 aa31.53■■■□□ 2.64
CTDNEP1-210ENST00000574322 LXNQ9BS40 222 aa31.53■■■□□ 2.64
CTDNEP1-210ENST00000574322 WRAP73Q9P2S5 460 aaPredicted RBP31.53■■■□□ 2.64
CTDNEP1-210ENST00000574322 AGTPBP1Q9UPW5 1226 aa31.53■■■□□ 2.64
CTDNEP1-210ENST00000574322 LRRC41Q15345 812 aa31.52■■■□□ 2.64
CTDNEP1-210ENST00000574322 NLRX1Q86UT6 975 aa31.52■■■□□ 2.64
CTDNEP1-210ENST00000574322 ZNF507Q8TCN5 953 aa31.52■■■□□ 2.64
CTDNEP1-210ENST00000574322 PIGOQ8TEQ8 1089 aa31.52■■■□□ 2.64
CTDNEP1-210ENST00000574322 BTBD7Q9P203 1132 aa31.52■■■□□ 2.64
CTDNEP1-210ENST00000574322 LCTP09848 1927 aa31.52■■■□□ 2.64
CTDNEP1-210ENST00000574322 A0A1W2PQC6 194 aa31.52■■■□□ 2.64
CTDNEP1-210ENST00000574322 GAP43P17677 238 aa31.52■■■□□ 2.64
CTDNEP1-210ENST00000574322 MOGSQ13724 837 aa31.52■■■□□ 2.64
CTDNEP1-210ENST00000574322 DNERQ8NFT8 737 aa31.52■■■□□ 2.64
CTDNEP1-210ENST00000574322 RDM1Q8NG50 284 aa31.52■■■□□ 2.64
CTDNEP1-210ENST00000574322 SCFD1Q8WVM8 642 aa31.52■■■□□ 2.64
CTDNEP1-210ENST00000574322 CNOT6LQ96LI5 555 aaKnown RBP31.52■■■□□ 2.64
CTDNEP1-210ENST00000574322 IWS1Q96ST2 819 aa31.52■■■□□ 2.64
CTDNEP1-210ENST00000574322 ZSWIM4Q9H7M6 989 aa31.52■■■□□ 2.64
CTDNEP1-210ENST00000574322 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP31.52■■■□□ 2.64
CTDNEP1-210ENST00000574322 COL4A3BPQ9Y5P4 624 aa31.52■■■□□ 2.64
CTDNEP1-210ENST00000574322 CACNB1Q02641 598 aaPredicted RBP31.51■■■□□ 2.63
CTDNEP1-210ENST00000574322 LRRC55Q6ZSA7 311 aa31.51■■■□□ 2.63
CTDNEP1-210ENST00000574322 EPM2AIP1Q7L775 607 aaPredicted RBP31.51■■■□□ 2.63
CTDNEP1-210ENST00000574322 SENP7Q9BQF6 1050 aa31.51■■■□□ 2.63
CTDNEP1-210ENST00000574322 TUBGCP2Q9BSJ2 902 aa31.51■■■□□ 2.63
CTDNEP1-210ENST00000574322 FGFBP2Q9BYJ0 223 aa31.51■■■□□ 2.63
CTDNEP1-210ENST00000574322 OLFML3Q9NRN5 406 aa31.51■■■□□ 2.63
CTDNEP1-210ENST00000574322 PFASO15067 1338 aa31.51■■■□□ 2.63
CTDNEP1-210ENST00000574322 SFNP31947 248 aa31.5■■■□□ 2.63
CTDNEP1-210ENST00000574322 KRT76Q01546 638 aa31.5■■■□□ 2.63
CTDNEP1-210ENST00000574322 NOGQ13253 232 aa31.5■■■□□ 2.63
CTDNEP1-210ENST00000574322 DHX30Q7L2E3 1194 aaKnown RBP eCLIP31.5■■■□□ 2.631e-10■■■□□ 14.6
CTDNEP1-210ENST00000574322 FASTKD5Q7L8L6 764 aaKnown RBP31.5■■■□□ 2.63
CTDNEP1-210ENST00000574322 TMEM139Q8IV31 216 aa31.5■■■□□ 2.63
CTDNEP1-210ENST00000574322 MS4A4AQ96JQ5 239 aa31.5■■■□□ 2.63
CTDNEP1-210ENST00000574322 ATP9AO75110 1047 aa31.49■■■□□ 2.63
CTDNEP1-210ENST00000574322 CETPP11597 493 aa31.49■■■□□ 2.63
CTDNEP1-210ENST00000574322 JAK3P52333 1124 aa31.49■■■□□ 2.63
CTDNEP1-210ENST00000574322 IRX3P78415 501 aaPredicted RBP31.49■■■□□ 2.63
CTDNEP1-210ENST00000574322 RAD51AP2Q09MP3 1159 aa31.49■■■□□ 2.63
CTDNEP1-210ENST00000574322 TRIM14Q14142 442 aa31.49■■■□□ 2.63
CTDNEP1-210ENST00000574322 CDHR1Q96JP9 859 aa31.49■■■□□ 2.63
CTDNEP1-210ENST00000574322 ASCC2Q9H1I8 757 aaPredicted RBP31.49■■■□□ 2.63
CTDNEP1-210ENST00000574322 KCTD10Q9H3F6 313 aa31.49■■■□□ 2.63
CTDNEP1-210ENST00000574322 DBR1Q9UK59 544 aaKnown RBP31.49■■■□□ 2.63
CTDNEP1-210ENST00000574322 TESPA1A2RU30 521 aaPredicted RBP31.49■■■□□ 2.63
CTDNEP1-210ENST00000574322 DDX39AO00148 427 aaKnown RBP31.49■■■□□ 2.63
CTDNEP1-210ENST00000574322 VEGFBP49765 207 aa31.49■■■□□ 2.63
CTDNEP1-210ENST00000574322 DNM2P50570 870 aa31.49■■■□□ 2.63
CTDNEP1-210ENST00000574322 BMT2Q1RMZ1 405 aa31.49■■■□□ 2.63
CTDNEP1-210ENST00000574322 PPP4R3CPQ6ZMV5 832 aa31.49■■■□□ 2.63
CTDNEP1-210ENST00000574322 PPFIBP1Q86W92 1011 aa31.49■■■□□ 2.63
CTDNEP1-210ENST00000574322 ZC3H3Q8IXZ2 948 aaKnown RBP31.49■■■□□ 2.63
CTDNEP1-210ENST00000574322 PANX2Q96RD6 677 aa31.49■■■□□ 2.63
CTDNEP1-210ENST00000574322 SPATC1LQ9H0A9 340 aa31.49■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms